Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001926-TA|BGIBMGA001926-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
(427 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 260 1e-69
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 257 1e-68
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 207 1e-53
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 162 6e-40
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 148 7e-36
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 37 0.027
05_07_0261 + 28764571-28764733,28766039-28766153,28766241-287663... 37 0.027
11_06_0452 + 23774378-23775054,23775228-23775411,23775911-237759... 36 0.082
05_01_0575 + 5112988-5114082 31 1.8
02_05_1337 - 35780076-35780290,35780377-35780408,35780490-357805... 31 2.3
01_06_0808 + 32134765-32136570 31 2.3
04_03_0083 + 10878487-10878714,10878781-10879223,10879267-108794... 29 5.4
04_02_0031 + 8874025-8874180,8882152-8882550,8882651-8882987,888... 29 5.4
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 29 7.1
01_05_0508 - 22804809-22805231,22805775-22806797 29 7.1
12_02_0554 + 20351660-20352299,20398588-20398907,20399120-203993... 29 9.4
07_03_0213 - 15244299-15246311 29 9.4
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731... 29 9.4
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 260 bits (638), Expect = 1e-69
Identities = 125/328 (38%), Positives = 195/328 (59%), Gaps = 1/328 (0%)
Query: 98 DIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENIL 157
D + LT + I ++ K+L YNV GK NRG++ I ++KML+ + L E
Sbjct: 47 DRIISLTYECRWIKELRVAQSATKMLDYNVLGGKCNRGISVIDSFKMLKGTDVLNKEETF 106
Query: 158 LANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSL 217
LA +GWC+E + L+L+DIM+ + RRG PCW R P VGL +ND ++++ + L
Sbjct: 107 LACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRIL 166
Query: 218 KRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSY 277
+RHF K YY +++ FNE+ K + G + + + DL+ + + + I +YKT+Y
Sbjct: 167 QRHFKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAY 226
Query: 278 YTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPTVTEKYGTDIQ 337
Y+F +PV+ ALL++G ++ + K IL++MG +FQ+QDD+LDC+GDP K GTDI+
Sbjct: 227 YSFYLPVACALLLSG-ENLDNFGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIE 285
Query: 338 DGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYD 397
D KC+WL V AL+RA QK I+ +NYG PE +A++KDLY+EL L + +E +Y+
Sbjct: 286 DYKCSWLVVQALERADENQKHILFENYGKPDPECVAKVKDLYKELNLEAVFHEYERESYN 345
Query: 398 LLRTQIQQVTRGLPHELFFKILDNIFRR 425
L I+ + L I++R
Sbjct: 346 KLIADIEAHPNKAVQNVLKSFLHKIYKR 373
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 257 bits (630), Expect = 1e-68
Identities = 120/312 (38%), Positives = 189/312 (60%), Gaps = 1/312 (0%)
Query: 114 EASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANVMGWCVEMFHTHQ 173
E +W+AK++ YNVP GK NRGL+ + +Y +L + + E+ LA V+GWCVE
Sbjct: 95 ETRQWVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASA 154
Query: 174 LLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHFNSKPYYNYVLET 233
L+L+DI + RR CW++ P VG++ IND L++ + +KR+F K Y+ ++E
Sbjct: 155 LVLDDITDNAYTRRDNLCWYKLPTVGMSAINDGVLLKCHVQAIIKRYFKEKFYFLDLMEL 214
Query: 234 FNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQMPVSLALLMTGV 293
+NE+ ++ +MG + + T DL+ + ++ Y I KYKTSYY+F +PV+ ALL+ G
Sbjct: 215 WNEIGLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGA 274
Query: 294 DDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPTVTEKYGTDIQDGKCTWLAVVALQRAT 353
+ + + K +L++MG +FQIQDD+LDCFGDP V K GTDI+D KC+WL V A++ A
Sbjct: 275 RLSD-YVELKNVLIEMGVYFQIQDDYLDCFGDPEVIGKVGTDIEDYKCSWLIVQAMELAN 333
Query: 354 PAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHE 413
+ +I+ +NYG + P+ +A +K +Y EL L + +E Y L + I T +
Sbjct: 334 ENEMKILYENYGKSDPKCVAEVKSVYRELDLQDIFLEYESRVYKHLVSTIDAETDRAIRD 393
Query: 414 LFFKILDNIFRR 425
+ L I+RR
Sbjct: 394 ILKSFLKKIYRR 405
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 207 bits (505), Expect = 1e-53
Identities = 117/348 (33%), Positives = 189/348 (54%), Gaps = 16/348 (4%)
Query: 78 ATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLA 137
A G V K++ EF ++ + +L + +W+ ++L YNVP GK NRGL+
Sbjct: 8 ACGGGGVDKEKE-EFKQIYGVLKEELLRDPAFEFTDSSRQWIDRMLDYNVPGGKCNRGLS 66
Query: 138 TILAYKMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPD 197
+ +YK+L+ L+ E++ LA+ +G C ++ T L+ M T
Sbjct: 67 VVDSYKLLKGTNVLSQEDMFLASTLG-CFKL--TFSCLMISWMILTL-----------DV 112
Query: 198 VGLNGINDAALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKP 257
VG IND ++++ + L+ HF K YY +L+ FNE+ K + G + + +
Sbjct: 113 VGSIAINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEK 172
Query: 258 DLSLFTMEKYEAITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQD 317
DL+ + + + I +YKTSYY+F +PV+ ALL++G +D + + IL+KMG +FQ+QD
Sbjct: 173 DLNKYNIGVHRRIVQYKTSYYSFYLPVACALLLSG-EDLTKYGAVEDILVKMGIYFQVQD 231
Query: 318 DFLDCFGDPTVTEKYGTDIQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKD 377
D+LDC+GDP K GTDI+D KC+WL V AL+RA +QK ++ +NYG P +A++K
Sbjct: 232 DYLDCYGDPKFIGKIGTDIEDYKCSWLVVQALERADESQKSVLFENYGKKDPACVAKVKS 291
Query: 378 LYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFKILDNIFRR 425
LY EL L + +E +Y L I+ + L I++R
Sbjct: 292 LYRELNLEAVFLDYENESYKKLIADIEAQPSIAVQNVLKSFLHKIYKR 339
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 162 bits (393), Expect = 6e-40
Identities = 76/187 (40%), Positives = 116/187 (62%), Gaps = 1/187 (0%)
Query: 198 VGLNGINDAALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKP 257
VGL GIND +++ + +K++F KPY+ +LE ++E+ ++ S+G + + T
Sbjct: 191 VGLRGINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTGAD 250
Query: 258 DLSLFTMEKYEAITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQD 317
DL+ +++E Y I KYKT+YY+F +PV+ ALL++G E K IL++MG +FQIQD
Sbjct: 251 DLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAK-LEDFSGLKDILIEMGIYFQIQD 309
Query: 318 DFLDCFGDPTVTEKYGTDIQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKD 377
D+LDCF DP K GTDI+D KC+WL V AL A Q +++ NYG +++ +K
Sbjct: 310 DYLDCFADPNTIGKIGTDIEDHKCSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEVKR 369
Query: 378 LYEELQL 384
Y L L
Sbjct: 370 TYAALDL 376
Score = 57.2 bits (132), Expect = 2e-08
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 87 DQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLE 146
D F+ + + DL EA +WLA+++ YNVP GK NRGL+ I +Y +L+
Sbjct: 53 DARERFVQAYGRLRDDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDSYLLLK 112
Query: 147 KKENLTPENILLANVMGWCVEMFHTHQLLL 176
+ +T ++ LA V+G C + H H L+
Sbjct: 113 QGSEVTEDDFFLACVLG-CFK--HVHYYLM 139
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 148 bits (359), Expect = 7e-36
Identities = 83/228 (36%), Positives = 127/228 (55%), Gaps = 21/228 (9%)
Query: 114 EASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANVMGWCVEMFHTHQ 173
+A +WL +L YNV G+KN ML + P N L GW ++ +
Sbjct: 42 DAIQWLESMLDYNVLGGEKN----------MLFRNNATKPNNGTLR--YGWQLQAYF--- 86
Query: 174 LLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHFNSKPYYNYVLET 233
L+L+DIM+ + RRG PCW R P VGL IND +++S + +R+F K YY +L+
Sbjct: 87 LVLDDIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDL 146
Query: 234 FNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQMPVSLALLMTGV 293
FNE+ ++ + G + ++ + DL+ KY I +YKT+YY+F +PV+ ALL+
Sbjct: 147 FNEVEIQTTSGQLLDQITTNEGRKDLN-----KYRRIVEYKTAYYSFYLPVACALLLFD- 200
Query: 294 DDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPTVTEKYGTDIQDGKC 341
+ + + Q K IL++MG +FQ QDD+LDCFG+P + K D C
Sbjct: 201 ESLDNYAQVKHILVEMGVYFQSQDDYLDCFGEPEIIGKENYGKSDPAC 248
Score = 48.0 bits (109), Expect = 1e-05
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 359 IMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFKI 418
I ++NYG + P +A++KDLY EL L +S +E +Y+ L + I+ +
Sbjct: 236 IGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAVRAVLKSF 295
Query: 419 LDNIFRRS 426
L I++RS
Sbjct: 296 LHKIYKRS 303
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 37.1 bits (82), Expect = 0.027
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 19/224 (8%)
Query: 151 LTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQ 210
LT E+ LA + +EM HT L+ +D+++ + MRRG H+ L G A L
Sbjct: 205 LTTEHQRLAEI----IEMIHTASLIHDDVIDDSGMRRGKETIHQ-----LYGTRVAVLAG 255
Query: 211 SAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAI 270
M+ F + V++ ++++ + G Q L D + T++ Y
Sbjct: 256 DFMFAQ-SSWFLANLENIEVIKLISQVIKDFASGEIKQASTLF----DCDI-TLDDYLLK 309
Query: 271 TKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPTVTE 330
+ YKT+ S A + +GV Q +G FQ+ DD LD
Sbjct: 310 SYYKTASLIAASTRS-AAIFSGV-STAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLG 367
Query: 331 K-YGTDIQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIA 373
K G+D+ G T + ALQ P ++I++ + A A
Sbjct: 368 KPAGSDLAKGNLTAPVIFALQ-DEPQLREIIDSEFSETNSLATA 410
>05_07_0261 +
28764571-28764733,28766039-28766153,28766241-28766344,
28766571-28766698,28766765-28767328
Length = 357
Score = 37.1 bits (82), Expect = 0.027
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 151 LTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQ 210
LT E+ LA + +EM HT L+ +D+++ + MRRG H+ L G A L
Sbjct: 95 LTTEHQRLAEI----IEMIHTASLIHDDVIDDSGMRRGKETIHQ-----LYGTRVAVLAG 145
Query: 211 SAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLF----TMEK 266
M+ F + V++ ++M+ CS ++ K +LF T++
Sbjct: 146 DFMFAQ-SSWFLANLENIEVIKLISQMM--CS--QVIKDFASGEIKQASTLFDCDVTLDD 200
Query: 267 YEAITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDP 326
Y + YKT+ S A + +GV Q +G FQ+ DD LD
Sbjct: 201 YLLKSYYKTASLLASSTRS-AAIFSGV-STTICEQMYEYGRNLGLSFQVVDDILDFTQSA 258
Query: 327 TVTEK-YGTDIQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDL 378
K G+D+ G T + ALQ P ++I++ + ++ +++A DL
Sbjct: 259 EQLGKPAGSDLAKGNLTAPVIFALQ-DEPKLREIIDSEF--SESDSLATAIDL 308
>11_06_0452 +
23774378-23775054,23775228-23775411,23775911-23775996,
23776116-23777010
Length = 613
Score = 35.5 bits (78), Expect = 0.082
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 5 KKSLEKFMQAYKNEVRRHISKTTSVTNSDA---MAPRLDQSASKSPQAEETGPKRLLKLQ 61
K+ +E+ Q+ K + R I K + V++S+ AP LD+S +P+ ++TG + ++Q
Sbjct: 20 KQRIEELTQSQKGAIDRFIIKESQVSSSNQTLDQAPALDRSIENNPRDDQTGTENNAEVQ 79
Query: 62 K 62
+
Sbjct: 80 E 80
>05_01_0575 + 5112988-5114082
Length = 364
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 199 GLNGINDAALIQSAMYTSLKRHFNSKPYYNYVLETFNEML---MKCSMGHYVQKLMLKTD 255
G+N + +A A++ L+ H N+ Y+ E ++L +K GH V+ L+LKT
Sbjct: 50 GVNNLPTSAEKNQALHF-LRHHLNTTLKNEYMTEEDPKVLWDSLKDRYGHQVKALLLKTK 108
Query: 256 KPDLSLFTMEKYEAITKYKT 275
+ L L + Y+++ +Y +
Sbjct: 109 REWLHL-RFQDYKSVEQYNS 127
>02_05_1337 -
35780076-35780290,35780377-35780408,35780490-35780584,
35780670-35780743,35780851-35780986,35781072-35781135,
35781333-35781395,35781514-35781656,35781752-35781889,
35781973-35782094,35782210-35782375,35782647-35782652,
35782988-35783059,35783241-35783348,35783719-35783848,
35783964-35784070,35784896-35785005,35785302-35785435,
35785528-35785982,35786068-35786595
Length = 965
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 24 SKTTSVTNSDAMAPRLDQSASKSPQAEETGPKRLLKLQKYHRFLSTLTPQEMPMATRGL 82
S TT+ +S +AP L Q+ ++P+ E Q+ +T TP +P +++ +
Sbjct: 83 SSTTATASSSPLAPELRQAIMEAPRPSELAQPSPTPPQEQPVDAATTTPHHIPSSSKSI 141
>01_06_0808 + 32134765-32136570
Length = 601
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 365 GVNKPEAIARIKDLYEELQ--LPHTYSVFEETTYDLLRTQIQQV 406
G KPE + R+ D+YE L LP +F+E D++ T+ +V
Sbjct: 286 GPPKPEKLFRLLDMYEVLNDLLPEVEFLFQEGCDDIVLTEYNEV 329
>04_03_0083 +
10878487-10878714,10878781-10879223,10879267-10879423,
10879573-10880433
Length = 562
Score = 29.5 bits (63), Expect = 5.4
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 66 FLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQY 125
FLS P + A RG S Q+R+ M P+ L E WL Y
Sbjct: 89 FLSKFFPMDKTNALRGRISSFQQTRDEM--IPEAWEHLQEYVAACPYHGMDDWLILQSFY 146
Query: 126 N--VPNGKKNRGLATILAYKMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIME 181
N P+ + + T A+ + + + +++N MGW E TH ++ I E
Sbjct: 147 NELTPSSRDHLDATTRGAFFLKTVRAAIDLIEKMVSN-MGWSEERLQTHHRGMHTIKE 203
>04_02_0031 +
8874025-8874180,8882152-8882550,8882651-8882987,
8883234-8884060
Length = 572
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 6 KSLEKFMQAYKNEVRRHISKTTSVTNSD 33
+S EKF + ++NEV+ H+ KTT SD
Sbjct: 469 ESFEKFKK-FQNEVQNHLGKTTKYLRSD 495
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 29.1 bits (62), Expect = 7.1
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 5 KKSLEKFMQAYKNEVRRHISKTTSVTNSDAMAPRLDQSASKSPQAEETGPKRLLKLQKYH 64
+++ K QA E H+ K T++D+M PR ++A P P + + Y
Sbjct: 65 RRAAAKARQAASQE---HVIKVREATSNDSMPPRFTRAA---PAMTRAAPFKTRSYEAYP 118
Query: 65 RFLSTLTPQEMPMATRGLAVSKDQSREFMAVFP 97
RF T T E P+ SK R ++ P
Sbjct: 119 RFRRT-TLGEWPVREIRTGPSKAAPRRRVSPEP 150
>01_05_0508 - 22804809-22805231,22805775-22806797
Length = 481
Score = 29.1 bits (62), Expect = 7.1
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 277 YYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPTVTEKYG 333
Y +PVS+ G+ D E HR + I+ ++ E FQ + L C D ++ G
Sbjct: 247 YCALNVPVSV-----GIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLG 298
>12_02_0554 +
20351660-20352299,20398588-20398907,20399120-20399344,
20399375-20399818
Length = 542
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 100 VRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTP 153
++D+ + + E WL L +N K + + ++ +K+ EKK+ + P
Sbjct: 306 LKDILNNKRPLPTTEGRSWLQMNLDHNSTVVKLTKQCSNVILHKLSEKKDPVCP 359
>07_03_0213 - 15244299-15246311
Length = 670
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 96 FPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNG 130
FP ++ L +H+ +W KL QYN+ G
Sbjct: 353 FPGVIAALLSLVRHLHPDSRGEWSGKLAQYNMIEG 387
>02_05_1303 +
35572403-35572624,35572744-35572860,35572987-35573112,
35573217-35573279,35573837-35573944,35574587-35574664,
35574772-35574864,35575206-35575292,35575429-35575530,
35575617-35575736,35575839-35575901,35575974-35576119,
35576203-35576296,35576399-35576457,35576568-35576607,
35576694-35576785,35576877-35576946,35578172-35578333,
35578477-35578703,35578863-35579070,35579173-35579258,
35579450-35579541,35579674-35579870
Length = 883
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 50 EETGPKR--LLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSRE 91
++ GPKR LLK QK + T+ P+E+ + LA +++RE
Sbjct: 500 DKAGPKRVDLLKNQKSDKVDVTIQPEELEVMDDVLAAKYEEARE 543
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,479,365
Number of Sequences: 37544
Number of extensions: 456125
Number of successful extensions: 1026
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1007
Number of HSP's gapped (non-prelim): 21
length of query: 427
length of database: 14,793,348
effective HSP length: 84
effective length of query: 343
effective length of database: 11,639,652
effective search space: 3992400636
effective search space used: 3992400636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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