GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001926-TA|BGIBMGA001926-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
         (427 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    27   0.74 
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    26   1.7  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    25   3.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   3.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   3.9  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   5.2  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    24   9.1  

>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 27.5 bits (58), Expect = 0.74
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 205 DAALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLML 252
           DA     A+YT LK  F+S P +  +L   N++   CS+  +++  ++
Sbjct: 60  DAGAQVDAIYTDLKSAFDSLP-HAILLAKLNKVRFPCSLVQWLKSYLI 106


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 290 MTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDP 326
           M    DP+ ++QAK I  ++G   ++++    C G P
Sbjct: 227 MANTYDPKLNQQAKVIARQIGIENELREGVYTCLGGP 263


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
          protein.
          Length = 344

 Score = 25.4 bits (53), Expect = 3.0
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 27 TSVTNSDAMAPRLDQSASKSPQAEETGPKRLLKLQKYHRFLSTLTP 72
          TS   +D   P+  +        ++ GP  L +LQ+  +  S LTP
Sbjct: 31 TSFDGNDGFGPQTRKGRRPVADDQQPGPSGLQRLQQQQQQPSRLTP 76


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 85  SKDQSREFMAVFPDIVRDLTETGKHID--VPEASKWLAKLLQYNVPNGKKNRGLATILAY 142
           SK   RE+   F  + +  T++ + +   V EA++ +  L + N P  K +  L ++L Y
Sbjct: 202 SKVLKREYFKAFYSLEKMKTDSTEELARIVNEANRLVRGLERLNEPVDKWDTPLTSLLFY 261

Query: 143 KMLEK 147
           K+  K
Sbjct: 262 KLDSK 266


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 364 YGVNKPEAIARIKDLYEELQ 383
           YG N P  +ARI+ L+++ Q
Sbjct: 518 YGTNMPALVARIRQLHQQGQ 537


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 5.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 73  QEMPMATRGLAVSKDQSREFMAVFPDIVRDLT 104
           QE P A+   AV   +S    AV  D+V +LT
Sbjct: 230 QEQPRASTSRAVMPPRSEALTAVRGDVVPELT 261


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 219 RHFNSKPYYNYVLETFNEMLMKCSMGH 245
           R +N+  YYNY     +   ++C   H
Sbjct: 157 RIYNNNYYYNYYCRNISHHFLRCFYRH 183


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,047
Number of Sequences: 2123
Number of extensions: 16808
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 7
length of query: 427
length of database: 516,269
effective HSP length: 66
effective length of query: 361
effective length of database: 376,151
effective search space: 135790511
effective search space used: 135790511
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)