GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001926-TA|BGIBMGA001926-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
         (427 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   3.7  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   3.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   4.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   4.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   6.5  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   8.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.6  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 317 DDFLDCFGDPTVTEKYGTDIQD 338
           DD+LD   +P   EK  TD QD
Sbjct: 223 DDYLDYAINPFDYEKRSTDFQD 244


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 317 DDFLDCFGDPTVTEKYGTDIQD 338
           DD+LD   +P   EK  TD QD
Sbjct: 223 DDYLDYAINPFDYEKRSTDFQD 244


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 275 TSYYTFQMPVS-LALLMTGVDDPETHRQAKTILLKMGEFFQIQDDF 319
           T+YY F + VS L LL++G+  PE +          GE F I   F
Sbjct: 88  TNYYLFSLAVSDLLLLISGL-PPEIYYIWSHFPYVFGEAFCIIQSF 132


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)

Query: 19  VRRHISKTTSVTNS 32
           VR H++ T SVTNS
Sbjct: 341 VRNHLNSTCSVTNS 354


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)

Query: 376 KDLYEELQLPHTYSVFEETTYDLLRT 401
           KD YE L   H Y+  +  TYD+LR+
Sbjct: 247 KDDYESLV--HLYTRDQSETYDVLRS 270


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 152 TPENILLANVMGWCVEMFHTHQLLLNDI 179
           T EN+  A V G  V+M+   Q+ L+++
Sbjct: 682 TMENLTCATVKGSAVDMYFRRQVELSNM 709


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 209 IQSAMYTSLKRHFNSKPYYNYVLETFNEM 237
           +++  Y         K Y+N VLE FN M
Sbjct: 54  VEATEYGEFPEDEKLKCYFNCVLEKFNVM 82


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 55  KRLLKLQKYHRFLSTL 70
           +R +K+ KYH FL+ L
Sbjct: 909 RRTMKVVKYHLFLTNL 924


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 55  KRLLKLQKYHRFLSTL 70
           +R +K+ KYH FL+ L
Sbjct: 947 RRTMKVVKYHLFLTNL 962


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.133    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,319
Number of Sequences: 429
Number of extensions: 4741
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 12
length of query: 427
length of database: 140,377
effective HSP length: 60
effective length of query: 367
effective length of database: 114,637
effective search space: 42071779
effective search space used: 42071779
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)