Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001926-TA|BGIBMGA001926-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
(427 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g17190.1 68417.m02586 farnesyl pyrophosphate synthetase 2 (FP... 277 1e-74
At5g47770.1 68418.m05901 farnesyl pyrophosphate synthetase 1, mi... 272 3e-73
At4g17190.2 68417.m02585 farnesyl pyrophosphate synthetase 2 (FP... 209 3e-54
At2g23800.1 68415.m02842 geranylgeranyl pyrophosphate synthase (... 47 2e-05
At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS) id... 45 8e-05
At3g29430.1 68416.m03697 geranylgeranyl pyrophosphate synthase, ... 40 0.003
At3g14510.1 68416.m01837 geranylgeranyl pyrophosphate synthase, ... 39 0.007
At3g14550.1 68416.m01843 geranylgeranyl pyrophosphate synthase, ... 38 0.010
At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative ... 35 0.12
At5g12980.1 68418.m01488 rcd1-like cell differentiation protein,... 34 0.21
At3g52300.1 68416.m05748 ATP synthase D chain-related contains w... 31 1.1
At1g01400.1 68414.m00055 hypothetical protein 31 1.1
At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH) domain... 31 1.5
At3g52525.1 68416.m05776 ovate protein, putative 83% similar to ... 30 3.4
At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein si... 29 4.5
At4g15890.1 68417.m02415 expressed protein 29 5.9
At1g76580.1 68414.m08911 SPL1-Related3 protein (SPL1R3) identica... 29 5.9
At3g14170.1 68416.m01791 expressed protein 29 7.8
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 29 7.8
>At4g17190.1 68417.m02586 farnesyl pyrophosphate synthetase 2 (FPS2)
/ FPP synthetase 2 / farnesyl diphosphate synthase 2
identical to SP|Q43315 Farnesyl pyrophosphate synthetase
2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate
synthetase 2) [Includes: Dimethylallyltransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)]
{Arabidopsis thaliana}
Length = 342
Score = 277 bits (678), Expect = 1e-74
Identities = 127/339 (37%), Positives = 207/339 (61%), Gaps = 1/339 (0%)
Query: 87 DQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLE 146
D F+ V+ + DL + E+ +WL ++L YNV GK NRGL+ + +YK+L+
Sbjct: 3 DLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKLLK 62
Query: 147 KKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDA 206
+ ++LT + L+ +GWC+E + L+L+DIM+ + RRG PCW R+P VG+ IND
Sbjct: 63 QGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAINDG 122
Query: 207 ALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEK 266
L+++ ++ LK+HF PYY +++ FNE+ + + G + + + DLS ++++
Sbjct: 123 ILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYSLQI 182
Query: 267 YEAITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDP 326
+ I +YKT+YY+F +PV+ ALLM G ++ E H KT+L+ MG +FQ+QDD+LDCF DP
Sbjct: 183 HRRIVEYKTAYYSFYLPVACALLMAG-ENLENHTDVKTVLVDMGIYFQVQDDYLDCFADP 241
Query: 327 TVTEKYGTDIQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPH 386
K GTDI+D KC+WL V AL+R + Q +I+ +NYG +P +A++K LY+EL L
Sbjct: 242 ETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLEG 301
Query: 387 TYSVFEETTYDLLRTQIQQVTRGLPHELFFKILDNIFRR 425
+ +E+ +Y+ L I+ + L I++R
Sbjct: 302 AFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKR 340
>At5g47770.1 68418.m05901 farnesyl pyrophosphate synthetase 1,
mitochondrial (FPS1) / FPP synthetase 1 / farnesyl
diphosphate synthase 1 identical to SP|Q09152 Farnesyl
pyrophosphate synthetase 1, mitochondrial precursor (FPP
synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase
1) [Includes: Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] {Arabidopsis
thaliana}
Length = 384
Score = 272 bits (667), Expect = 3e-73
Identities = 125/345 (36%), Positives = 206/345 (59%), Gaps = 1/345 (0%)
Query: 60 LQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWL 119
+ +H L +L + ++ D F+ V+ + DL E+ W+
Sbjct: 18 IPSHHLHLRSLGGSLYRRRIQSSSMETDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWV 77
Query: 120 AKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDI 179
++L YNV GK NRGL+ + ++K+L++ +LT + + L+ +GWC+E + L+L+DI
Sbjct: 78 DRMLDYNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDI 137
Query: 180 MEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLM 239
M+ + RRG PCW R P VG+ IND L+++ ++ LK+HF KPYY +++ FNE+ +
Sbjct: 138 MDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVEL 197
Query: 240 KCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQMPVSLALLMTGVDDPETH 299
+ + G + + + DL+ +++ + I +YKT+YY+F +PV+ ALLM G ++ E H
Sbjct: 198 QTACGQMIDLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAG-ENLENH 256
Query: 300 RQAKTILLKMGEFFQIQDDFLDCFGDPTVTEKYGTDIQDGKCTWLAVVALQRATPAQKQI 359
K +L+ MG +FQ+QDD+LDCF DP K GTDI+D KC+WL V AL+R + Q +I
Sbjct: 257 IDVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKI 316
Query: 360 MEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQ 404
+ +NYG P +A++KDLY+EL L + +E +Y+ L I+
Sbjct: 317 LYENYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSYEKLTGAIE 361
>At4g17190.2 68417.m02585 farnesyl pyrophosphate synthetase 2 (FPS2)
/ FPP synthetase 2 / farnesyl diphosphate synthase 2
identical to SP|Q43315 Farnesyl pyrophosphate synthetase
2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate
synthetase 2) [Includes: Dimethylallyltransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)]
{Arabidopsis thaliana}
Length = 247
Score = 209 bits (510), Expect = 3e-54
Identities = 95/246 (38%), Positives = 152/246 (61%), Gaps = 1/246 (0%)
Query: 180 MEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLM 239
M+ + RRG PCW R+P VG+ IND L+++ ++ LK+HF PYY +++ FNE+
Sbjct: 1 MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF 60
Query: 240 KCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQMPVSLALLMTGVDDPETH 299
+ + G + + + DLS ++++ + I +YKT+YY+F +PV+ ALLM G ++ E H
Sbjct: 61 QTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAG-ENLENH 119
Query: 300 RQAKTILLKMGEFFQIQDDFLDCFGDPTVTEKYGTDIQDGKCTWLAVVALQRATPAQKQI 359
KT+L+ MG +FQ+QDD+LDCF DP K GTDI+D KC+WL V AL+R + Q +I
Sbjct: 120 TDVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKI 179
Query: 360 MEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFKIL 419
+ +NYG +P +A++K LY+EL L + +E+ +Y+ L I+ + L
Sbjct: 180 LYENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFL 239
Query: 420 DNIFRR 425
I++R
Sbjct: 240 AKIYKR 245
>At2g23800.1 68415.m02842 geranylgeranyl pyrophosphate synthase
(GGPS2) (GGPS5) / GGPP synthetase /
farnesyltranstransferase identical to GB:U44876;
sequence disagrees at N-Terminus, sequence submitted has
been confirmed from three electropherograms.
Length = 376
Score = 47.2 bits (107), Expect = 2e-05
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 7/200 (3%)
Query: 166 VEMFHTHQLLLNDI--MEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHFNS 223
VEM HT L+ +D+ M+ +RRG P H+ G+ ++ AL+ A +S
Sbjct: 153 VEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISS 212
Query: 224 KPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQMP 283
+ V E + + + Q + + ++ DL+ +E E I +KT+
Sbjct: 213 ERMVWAVRELARSIGTRGLVAG--QAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAA 270
Query: 284 VSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLD-CFGDPTVTEKYGTDIQDGKCT 342
V A++ G D E + +G FQ+ DD LD + + G D GK T
Sbjct: 271 VLGAIIGGGSD--EEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLT 328
Query: 343 WLAVVALQRATPAQKQIMED 362
+ ++ L+++ K++ +D
Sbjct: 329 YPKLIGLEKSKEFVKRLTKD 348
>At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS)
identical to solanesyl diphosphate synthase [Arabidopsis
thaliana] GI:19911233; contains Pfam profile PF00348:
Polyprenyl synthetase
Length = 406
Score = 45.2 bits (102), Expect = 8e-05
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 24/240 (10%)
Query: 130 GKKNR-GLATILAYKMLEKK--ENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMR 186
GK+ R GL ++++ E + LT E+ LA + +EM HT L+ +D+++ + MR
Sbjct: 125 GKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEI----IEMIHTASLIHDDVLDESDMR 180
Query: 187 RGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHY 246
RG H L G A L M+ + + V++ ++++ + G
Sbjct: 181 RGKETVHE-----LFGTRVAVLAGDFMFAQASWYLANLENLE-VIKLISQVIKDFASGEI 234
Query: 247 VQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTIL 306
Q L L + ++ + YKT+ A+ +P+ Q
Sbjct: 235 KQASSLFDCDTKLDEYLLKSF-----YKTASLVAASTKGAAIFSR--VEPDVTEQMYEFG 287
Query: 307 LKMGEFFQIQDDFLDCFGDPT--VTEKYGTDIQDGKCTWLAVVALQRATPAQKQIMEDNY 364
+G FQI DD LD F T + + G+D+ G T + AL+R P ++I+E +
Sbjct: 288 KNLGLSFQIVDDILD-FTQSTEQLGKPAGSDLAKGNLTAPVIFALER-EPRLREIIESEF 345
>At3g29430.1 68416.m03697 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to gi:413730;
similar to geranylgeranyl pyrophosphate synthase,
chloroplast precursor GB:P34802 from [Arabidopsis
thaliana]
Length = 357
Score = 39.9 bits (89), Expect = 0.003
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Query: 166 VEMFHTHQLLLNDI--MEGTTMRRGVPCWHRRPDVGLNGI-NDAALIQSAMYTSLKRHFN 222
VEM HT L+ +D+ M+ +RRG P H+ + + DA L + + + +
Sbjct: 131 VEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGL 190
Query: 223 SKP--YYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTF 280
P V+E + K + V L + PD +E+ E I +KT+
Sbjct: 191 VAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDD--VGLERLEFIHLHKTAAL-L 247
Query: 281 QMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPTVTEKY-GTDIQDG 339
+ L +M G + E + K +G FQ+ DD LD K G D+ G
Sbjct: 248 EAAAVLGAIMGGGTEEEIEKLRKYARC-IGLLFQVVDDILDVTESTKELGKTAGKDVMAG 306
Query: 340 KCTWLAVVALQRATPAQKQIMED 362
K T+ ++ L+R+ +++ +
Sbjct: 307 KLTYPRLIGLERSREVAEKLRRE 329
>At3g14510.1 68416.m01837 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to
gi:9294375; similar to geranylgeranyl pyrophosphate
synthetase GB:P34802 [Arabidopsis thaliana]
Length = 284
Score = 38.7 bits (86), Expect = 0.007
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 166 VEMFHTHQLLLNDI--MEGTTMRRGVPCWHR--RPDVG-LNGINDAALIQSAMYTSLKRH 220
VEM HT L+ +D+ M+ +RRG P H+ D+ L G AL M
Sbjct: 58 VEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGL 117
Query: 221 FNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKP-DLSLFTMEKYEAITKYKTSYYT 279
S+ V+E + K + V L + P D+ L E+ E I +KT+
Sbjct: 118 VASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGL---ERLEFIHLHKTAAL- 173
Query: 280 FQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPTVTEKY-GTDIQD 338
+ + +M G + E + K +G FQ+ DD LD K G D+
Sbjct: 174 LEAAAVIGAIMGGGTEEEIEKLRKYARC-IGLLFQVVDDILDVTKSTEELGKTAGKDVMA 232
Query: 339 GKCTWLAVVALQRATPAQKQIMED 362
GK T+ ++ L+R+ +++ +
Sbjct: 233 GKLTYPRLIGLERSREVAEKLSRE 256
>At3g14550.1 68416.m01843 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to SP|Q43133
Geranylgeranyl pyrophosphate synthetase, chloroplast
precursor (GGPP synthetase) (GGPS) [Includes:
Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)] {Sinapis alba};
contains Pfam profile PF00348: Polyprenyl synthetase
Length = 360
Score = 38.3 bits (85), Expect = 0.010
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 166 VEMFHTHQLLLNDI--MEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHFNS 223
VEM HT L+ +D+ M+ +RRG P H+ + + AL+ A + + +
Sbjct: 134 VEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALA-FEHMTVVSSG 192
Query: 224 KPYYNYVLETFNEMLMKCSMGHYV--QKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQ 281
++ E+ V Q + L +++ + +E E I +KT+ +
Sbjct: 193 LVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL-LE 251
Query: 282 MPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPTVTEKY-GTDIQDGK 340
L ++M G + E + K +G FQ+ DD LD K G D+ GK
Sbjct: 252 AAAVLGVIMGGGTEEEIEKLRKYARC-IGLLFQVVDDILDVTKSTEELGKTAGKDVMAGK 310
Query: 341 CTWLAVVALQRATPAQKQIMED 362
T+ ++ L+R+ +++ +
Sbjct: 311 LTYPRLIGLERSKEVAEKLRRE 332
>At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative /
GPPS, putative / dimethylallyltransferase, putative /
prenyl transferase, putative similar to GI:11322965;
Except for first 55 amino acids, 52% identical to Prenyl
transferase (Cyanophora paradoxa) (gi 99282). Location
of est 120E9T7 (gb|T43950)
Length = 417
Score = 34.7 bits (76), Expect = 0.12
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 162 MGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQSAMYTSLKRHF 221
+G +EM HT L+ +D+++ + MRRG H L G A L M+ +
Sbjct: 167 LGEIIEMIHTASLIHDDVLDESDMRRGRETVHE-----LFGTRVAVLAGDFMFAQASWYL 221
Query: 222 NSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTMEKYEAITKYKTSYYTFQ 281
+ V++ ++++ + G Q L L + ++ Y YKT+
Sbjct: 222 ANLENLE-VIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSY-----YKTASLVAA 275
Query: 282 MPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGDPT--VTEKYGTDIQDG 339
A+ + + Q +G FQ+ DD LD F T + + D+ G
Sbjct: 276 STKGAAIF--SKVESKVAEQMYQFGKNLGLSFQVVDDILD-FTQSTEQLGKPAANDLAKG 332
Query: 340 KCTWLAVVALQRATPAQKQIMEDNY 364
T + AL+ P ++I+E +
Sbjct: 333 NITAPVIFALEN-EPRLREIIESEF 356
>At5g12980.1 68418.m01488 rcd1-like cell differentiation protein,
putative similar to protein involved in sexual
development [Schizosaccharomyces pombe] GI:1620896;
contains Pfam profile PF04078: Cell differentiation
family, Rcd1-like
Length = 311
Score = 33.9 bits (74), Expect = 0.21
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 97 PDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLA 137
PD++RD T +G D P A +WL +LL G+ +GLA
Sbjct: 266 PDLLRDATFSGCLYDDPPAMQWLQQLLHNVNVGGRAPQGLA 306
>At3g52300.1 68416.m05748 ATP synthase D chain-related contains weak
similarity to ATP synthase D chain, mitochondrial (EC
3.6.3.14) (Swiss-Prot:P31399) [Rattus norvegicus]
Length = 168
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 8 LEKFMQAYKN-EVRRHISKTTSVTNS--DAMAPRLDQSASKSPQAEETGPKRLLKLQKYH 64
++K+ +AY + E+ +++ K T DA+ L ++ KS + E K + +Q+
Sbjct: 76 VDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKESERLEKEIADVQEIS 135
Query: 65 RFLSTLTPQE 74
+ LST+T E
Sbjct: 136 KKLSTMTADE 145
>At1g01400.1 68414.m00055 hypothetical protein
Length = 204
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 16 KNEVRRHISKTTSVTNSDAMAPRL-DQSASKSPQAEETGPKRLLKLQKYHRFLSTLT 71
+NEV H + T ++ A +PR +++ ++S Q +TGP+ +L LQ LS T
Sbjct: 9 RNEVD-HETPTKPDESASASSPRRSEETLNQSTQINQTGPRSVLHLQSQESHLSNST 64
>At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain;
similar to Af10-protein - Avena fatua, EMBL:U80041
Length = 1024
Score = 31.1 bits (67), Expect = 1.5
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 3/131 (2%)
Query: 283 PVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDD-FLDCFGDPTVTEKYGTDIQDGKC 341
P LA++ + ET+ QA T L Q F D FGD D + +
Sbjct: 409 PNPLAIVTSDSTSVETNGQANTGLAPSFSTSQSSTQPFDDPFGDSPFKAITSADTETSQH 468
Query: 342 TWLAVVALQRATPAQKQIMEDNYGVNKP-EAIARIKDLYEELQLPHTYSVFEETTYDLLR 400
V Q P E N+G + A+ + + +Q P SVF + +D +
Sbjct: 469 QSFGV-PFQPTPPTSNPNNEHNFGFGEAFSAVTDSEPGVQNMQAPPNLSVFPQEQFDTSQ 527
Query: 401 TQIQQVTRGLP 411
++I + LP
Sbjct: 528 SEIDILAGILP 538
>At3g52525.1 68416.m05776 ovate protein, putative 83% similar to
ovate protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 159
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 54 PKRLLKLQKY-HRFLSTLTPQEMPMATRGLAVSKDQSREFM 93
PKR ++ H +S+ TP P+AT +AV KD ++
Sbjct: 39 PKRPSSTYRHCHSSISSATPSSTPLATASVAVEKDSDDPYL 79
>At1g07000.1 68414.m00745 exocyst subunit EXO70 family protein
similar to leucine zipper protein GI:10177020 from
[Arabidopsis thaliana] contains Pfam domain PF03081:
Exo70 exocyst complex subunit;
Length = 599
Score = 29.5 bits (63), Expect = 4.5
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 334 TDIQDGKCTWLAVVALQRATPAQKQIMEDNY--GVNKPEAIARIKDLYEELQ--LPHTYS 389
+D+ T L+ + + R T Q D G PE + ++ DLYE +Q +P +
Sbjct: 273 SDLPVSSVTDLSFMEVCRGTTTQLLNFADAIALGSRLPERLFKVVDLYEAMQDLIPKMET 332
Query: 390 VFEETTYDLLRTQIQQVTRGLPHEL--FFKILDNIFRR 425
+F + LR + + + L + F L+N+ RR
Sbjct: 333 LFSDRYCSPLRHEALAIHKRLGEAIRGIFMELENLIRR 370
>At4g15890.1 68417.m02415 expressed protein
Length = 1314
Score = 29.1 bits (62), Expect = 5.9
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query: 37 PRLDQSASKSPQAEETGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVF 96
PR+ S Q E L L++ R + L+P + SKD R+ A+F
Sbjct: 505 PRMIMDNETSIQEECENVFHELVLERILRAGNVLSPDSASLPNNRNTTSKDLDRDIEALF 564
Query: 97 PDIVRDLTETGKHIDVPEASKWLAKL 122
P+ V L + + E S W+ K+
Sbjct: 565 PEGVLVLL---RELCNSEVSPWVTKI 587
>At1g76580.1 68414.m08911 SPL1-Related3 protein (SPL1R3) identical
to cDNA partial mRNA for SPL1-Related3 protein (SPL1R3
gene) GI:6006428
Length = 488
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 7 SLEKFMQAYKNEVRRHISKTTSVTNSDAMAPRLDQSASKSPQAEETGPKRLL-KLQKYHR 65
SL+ F + + E R ++ +T +S + P D+S S SP +E P + ++Y+
Sbjct: 172 SLQLFTSSPEEESRPKVASSTKYYSSASSNPVEDRSPSSSPVMQELFPLHTSPETRRYNN 231
Query: 66 FLSTLT 71
+ T T
Sbjct: 232 YKDTST 237
>At3g14170.1 68416.m01791 expressed protein
Length = 484
Score = 28.7 bits (61), Expect = 7.8
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 90 REFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATI-LAYKMLE-- 146
RE + F + D +TG H VPE K K + P+ L+ + A + LE
Sbjct: 387 RETRSWFLKFLEDALDTGLHATVPE-KKGKTKGARLAEPDNHIAETLSQLKQANEWLEKV 445
Query: 147 KKENLTPENILLANV 161
K +NL+ +N LL N+
Sbjct: 446 KNDNLSSDNSLLENI 460
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 353 TPAQKQIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGL 410
T ++ + G++KPEA+ I L +E+ T F +++Y++ ++ + +G+
Sbjct: 105 TGGSTNVVVKSSGLSKPEAMGEIDKLQKEILALQTEKEFVKSSYEIGLSKYWEFEKGI 162
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,664,492
Number of Sequences: 28952
Number of extensions: 392614
Number of successful extensions: 1020
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1007
Number of HSP's gapped (non-prelim): 19
length of query: 427
length of database: 12,070,560
effective HSP length: 83
effective length of query: 344
effective length of database: 9,667,544
effective search space: 3325635136
effective search space used: 3325635136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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