Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001925-TA|BGIBMGA001925-PA|IPR010405|Cofactor of BRCA1
(587 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y113 Cluster: Negative elongation factor B homolog; n... 850 0.0
UniRef50_Q8WX92 Cluster: Negative elongation factor B; n=64; Eut... 542 e-153
UniRef50_UPI0000E4898B Cluster: PREDICTED: hypothetical protein;... 535 e-150
UniRef50_A7T0W2 Cluster: Predicted protein; n=1; Nematostella ve... 433 e-120
UniRef50_Q54Q08 Cluster: Putative uncharacterized protein; n=1; ... 169 2e-40
UniRef50_UPI0000E221F4 Cluster: PREDICTED: similar to A730008L03... 118 3e-25
UniRef50_Q018S9 Cluster: Homology to unknown gene; n=1; Ostreoco... 95 6e-18
UniRef50_Q7RN37 Cluster: CCAAT-box DNA binding protein subunit B... 38 0.56
UniRef50_Q8IKX1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.98
UniRef50_Q4XL76 Cluster: Putative uncharacterized protein; n=3; ... 38 0.98
UniRef50_A1ZTB7 Cluster: Chaperone ClpB, putative; n=1; Microsci... 37 1.3
UniRef50_Q2L5W5 Cluster: Putative uncharacterized protein; n=2; ... 36 4.0
UniRef50_P33275 Cluster: Uncharacterized protein MYCGA3080; n=2;... 35 5.3
UniRef50_Q0F4G5 Cluster: Putative uncharacterized protein; n=1; ... 35 6.9
UniRef50_A5K3Q3 Cluster: Putative uncharacterized protein; n=1; ... 35 6.9
>UniRef50_Q9Y113 Cluster: Negative elongation factor B homolog; n=6;
Endopterygota|Rep: Negative elongation factor B homolog
- Drosophila melanogaster (Fruit fly)
Length = 594
Score = 850 bits (2103), Expect = 0.0
Identities = 406/581 (69%), Positives = 464/581 (79%), Gaps = 4/581 (0%)
Query: 9 GTGLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDF 68
GTGLE+V +PGQ +LR+ALTSCTDPLKAIE FQLENG+ HGVRRLDF
Sbjct: 12 GTGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLPSLRPMLPLLDLHGVRRLDF 71
Query: 69 HTSVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPH 128
HTS++EELR+KLIAHI FPVVRVK+LRPV+M IL+N H
Sbjct: 72 HTSLMEELRDKLIAHINEMGQKEPRERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQH 131
Query: 129 IDDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHENL 188
IDDKYL++LVRDRELY DTDTEVKRQIW+DNQSLFGDEVSPLLSQYIREKE +LFDH NL
Sbjct: 132 IDDKYLKILVRDRELYADTDTEVKRQIWRDNQSLFGDEVSPLLSQYIREKEHILFDHTNL 191
Query: 189 TNLFFSPSPKVRRQGAVVQKLAHMIGTSVKLYDMVLQXXXXXXXXXXNVHYCTLRAELLM 248
NLFF P+PKVRRQG VVQKLA+MIGTSVKLYDMVLQ NVHYCTLRAELLM
Sbjct: 192 NNLFFHPTPKVRRQGEVVQKLANMIGTSVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLM 251
Query: 249 ALHDLEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDSIKKGQEQVLGDLSM 308
ALHDLEVQ+IIS+DPCHKFTWCLDACIRE+NVDIKRSRELQGFLD+IK+GQEQVLGDLSM
Sbjct: 252 ALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQGFLDNIKRGQEQVLGDLSM 311
Query: 309 TLCDPYAINFLATSAIKILQHLINTEGLPRDSTVXXXXXXXXXXXXSAWVMIDSQEFKEP 368
TLCDPYAINFLATSAIKIL HLIN EG+PRD+ + SAWVMIDSQ+FKEP
Sbjct: 312 TLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRMLALGLSAWVMIDSQDFKEP 371
Query: 369 KLDSQCVTKYLPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESS 428
KLD Q VTK+LPALMSLMVDDQ R+LH KLPPDERESA+TTIEHSGP PDA EAY++ESS
Sbjct: 372 KLDCQVVTKFLPALMSLMVDDQCRSLHAKLPPDERESALTTIEHSGPAPDAVEAYIQESS 431
Query: 429 VCGVIAMYYTLHAAKLRDRGALLRILSILGSCKDGRAYEDPFLHALVALLVQLPDEFQGE 488
V ++AMYYTLH A+L+DR +LR+L+IL +CKD RAYEDPFLH+L+ALL+ + +EF E
Sbjct: 432 VASILAMYYTLHTARLKDRVGVLRVLAILSACKDDRAYEDPFLHSLIALLIPMSEEFATE 491
Query: 489 DFSTVLFDEFFFAGLSKDNVT-RHLLKLLWYIHPKLPETRIQTLMKALQPGTQHNESVHK 547
DF T LFDEF FAGL+++NVT RH+LKLLWY+H KLP R+ TLMKA+QP T HNE +HK
Sbjct: 492 DFCTTLFDEFIFAGLTRENVTSRHMLKLLWYVHNKLPAGRLATLMKAMQPTTAHNEHIHK 551
Query: 548 LYETLQQKL--NAQTEPGPSATEMEYLDSPLMSVRTPAPYH 586
LYE LQ+++ A P A ME+ DSPL SV TP P++
Sbjct: 552 LYEILQERIGTGAAETPVIEAPPMEF-DSPLKSVPTPGPHY 591
>UniRef50_Q8WX92 Cluster: Negative elongation factor B; n=64;
Euteleostomi|Rep: Negative elongation factor B - Homo
sapiens (Human)
Length = 580
Score = 542 bits (1338), Expect = e-153
Identities = 278/580 (47%), Positives = 368/580 (63%), Gaps = 10/580 (1%)
Query: 11 GLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDFHT 70
GL+++GV L++ LT+CT+PLKAIE+FQ ENG+ HG RL+FH
Sbjct: 4 GLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLEFHQ 63
Query: 71 SVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXX-XFPVVRVKALRPVIMGILKNIPHI 129
SV +ELR+KL+ + F +V++ +L+PV+M ++K++P +
Sbjct: 64 SVFDELRDKLLERVSAIASEGKAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKV 123
Query: 130 DDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHE-NL 188
+K L++++ D+ELY EVKRQIWQDNQ+LFGDEVSPLL QYI EKE LF E ++
Sbjct: 124 PEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKESALFSTELSV 183
Query: 189 TNLFFSPSPKVRRQGAVVQKLAHMIGTSVKLYDMVLQXXXXXXXXXXNVHYCTLRAELLM 248
+ FFSPSPK RRQG VVQ+L M+G +VKLYDMVLQ NVHYCTLRAELLM
Sbjct: 184 LHNFFSPSPKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLM 243
Query: 249 ALHDLEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDSIKKGQEQVLGDLSM 308
+LHDL+V +I +VDPCHKFTWCLDACIRER VD KR+RELQGFLD +KKGQEQVLGDLSM
Sbjct: 244 SLHDLDVGEICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQVLGDLSM 303
Query: 309 TLCDPYAINFLATSAIKILQHLINTEGLPRDSTVXXXXXXXXXXXXSAWVMIDSQEFKEP 368
LCDP+AIN LA S ++ LQ L+ E LPRDS AW MIDSQ FKEP
Sbjct: 304 ILCDPFAINTLALSTVRHLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMIDSQVFKEP 363
Query: 369 KLDSQCVTKYLPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESS 428
K++ + +T++LP LMS +VDD + KLP +E+ + + P++ +++E
Sbjct: 364 KMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEK----APVSYPNTLPESFTKFLQEQR 419
Query: 429 VCGVIAMYYTLHAAKLRDRGALLRILSILGSCKDGRAYEDPFLHALVALLVQLPDEFQGE 488
+ + +YY LH K R++ ALLR+L L A+ D FLH L L L DEF E
Sbjct: 420 MACEVGLYYVLHITKQRNKNALLRLLPGLVETFGDLAFGDIFLHLLTGNLALLADEFALE 479
Query: 489 DFSTVLFDEFFF-AGLSKDNVTRHLLKLLWYIHPKLPETRIQTLMKALQPGTQHNESVHK 547
DF + LFD FF A K+NV RH L+LL ++HP++ ++++ L KAL+P Q E+V +
Sbjct: 480 DFCSSLFDGFFLTASPRKENVHRHALRLLIHLHPRVAPSKLEALQKALEPTGQSGEAVKE 539
Query: 548 LYETLQQKLNA--QTEPGPS-ATEMEYLDSPLMSVRTPAP 584
LY L +KL +P P+ A E L+ PL SV PAP
Sbjct: 540 LYSQLGEKLEQLDHRKPSPAQAAETPALELPLPSVPAPAP 579
>UniRef50_UPI0000E4898B Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 640
Score = 535 bits (1321), Expect = e-150
Identities = 263/569 (46%), Positives = 364/569 (63%), Gaps = 9/569 (1%)
Query: 11 GLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDFHT 70
G EEVG+ G LR+ALT+CTDPL+AIE+FQ ENGI H ++R FH
Sbjct: 3 GFEEVGIAGSVHLREALTNCTDPLQAIEDFQSENGILLPTLQPALPLLDLHMIQRFAFHH 62
Query: 71 SVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPHID 130
S++EELREKL++ FP++RVK+++PV+M ++K +P I
Sbjct: 63 SIMEELREKLMSRAQELAKSDTKGRFKTIEDLLSKCFPLIRVKSIQPVVMSVMKCLPKIP 122
Query: 131 DKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHENLTN 190
+KYL VLV DR LY+ EVK+QIWQ N SLFGDEVSPLL+ YI+ KE VLF E + +
Sbjct: 123 EKYLTVLVEDRSLYDVASIEVKQQIWQRNPSLFGDEVSPLLTDYIKNKESVLFGSEAVNS 182
Query: 191 -LFFSPSPKVRRQGAVVQKLAHMIGTSVKLYDMVLQXXXXXXXXXXNVHYCTLRAELLMA 249
+FF SPK+RRQG VVQKL M+G SVKL+DMVLQ N+HYCTLRAELLM+
Sbjct: 183 QMFFLVSPKMRRQGHVVQKLTGMVGKSVKLFDMVLQFLRTLFLSTRNMHYCTLRAELLMS 242
Query: 250 LHDLEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDSIKKGQEQVLGDLSMT 309
LHDLE+ +I + DPCHKFTW LDAC+R++ VD K+++ELQGFLD +++GQEQVLGDLSM
Sbjct: 243 LHDLEIHEICTEDPCHKFTWTLDACVRDKQVDDKKAKELQGFLDGVRRGQEQVLGDLSMI 302
Query: 310 LCDPYAINFLATSAIKILQHLINTEGLPRDSTVXXXXXXXXXXXXSAWVMIDSQEFKEPK 369
LCDP+A++ LATS I+ + LIN + LPRDS AW M+DSQ F+EPK
Sbjct: 303 LCDPFAVHTLATSVIRHMTSLINQDKLPRDSPDLTSLLRMLSLGLGAWDMLDSQRFREPK 362
Query: 370 LDSQCVTKYLPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESSV 429
L++ + K+LPAL+SL+VDDQ+R ++ +L +S + T+ P Y+R + +
Sbjct: 363 LENDLILKFLPALLSLLVDDQMRIVNRRLNDTGDDSDLKTL------PAFLLKYIRRNKI 416
Query: 430 CGVIAMYYTLHAAKLRDRGALLRILSILGSCKDGRAYEDPFLHALVALLVQLPDEFQGED 489
+ +YY LH R++ AL R L + + ++ D FLH VA L L D+F +
Sbjct: 417 GATLILYYVLHVTSKRNKDALARALPNIVKMEGDLSFNDIFLHPFVAQLSVLIDDFSSDS 476
Query: 490 FSTVLFDEFFFAGLSKDNVTRHLLKLLWYIHPKLPETRIQTLMKALQPGTQHNESVHKLY 549
F ++FD F G+S++NV RH L+L+ ++ KLP ++ L AL+P +H+++V LY
Sbjct: 477 FCEIIFDGFLLHGVSRENVARHSLRLMEFVFHKLPAAKLSKLQNALEPKPEHSQAVRDLY 536
Query: 550 ETLQQKLNAQTEPGPSATEMEYLDSPLMS 578
++ +K+N+ T P P E +DSPLMS
Sbjct: 537 SSVMEKINSHT-PSPIKVP-EPIDSPLMS 563
>UniRef50_A7T0W2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 577
Score = 433 bits (1068), Expect = e-120
Identities = 230/578 (39%), Positives = 327/578 (56%), Gaps = 12/578 (2%)
Query: 11 GLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDFHT 70
G E G+PG LR AL++ +D IE FQ +NGI HGVRRLDFH+
Sbjct: 3 GFERAGLPGIEHLRQALSNSSDLAATIESFQHDNGILLPSLQSALPFLDLHGVRRLDFHS 62
Query: 71 SVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPHID 130
SV+E LRE ++ + FP + VK LRPV++ ++K++P I+
Sbjct: 63 SVMEHLRESVLEKVKDLSTQKLEEILEQS-------FPFIHVKELRPVVVAVMKHLPKIN 115
Query: 131 DKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHE-NLT 189
D+ L + D +LY D EVKRQIW + LFGD V PLL+QYI K +L E + +
Sbjct: 116 DECLEHIANDAKLYEDCPIEVKRQIWSKHHHLFGDAVGPLLNQYIEAKYTLLHSTEAHNS 175
Query: 190 NLFFSPSPKVRRQGAVVQKLAHMIGTSVKLYDMVLQXXXXXXXXXXNVHYCTLRAELLMA 249
+ FFS K RRQ A+VQ LA MIG S+ LY++VLQ VHYCTLR+ELLMA
Sbjct: 176 HSFFSVPSKTRRQHAIVQGLAKMIGKSLSLYNLVLQFLRTLFLRANEVHYCTLRSELLMA 235
Query: 250 LHDLEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDSIKKGQEQVLGDLSMT 309
+HDLEV+DI VDPCHKFTWCLDACIRE++++ KR RELQGFL+ K G+E+VLGD++M
Sbjct: 236 VHDLEVKDIKDVDPCHKFTWCLDACIREKSIEGKRVRELQGFLEMAKNGEERVLGDIAMI 295
Query: 310 LCDPYAINFLATSAIKILQHLINTEGLPRDSTVXXXXXXXXXXXXSAWVMIDSQEFKEPK 369
LCDP+AIN +A S IK+L L NT+ LPR S SAW MI+ Q FKE
Sbjct: 296 LCDPFAINTIAKSIIKLLHRLANTDTLPRTSEDITFLLRLLNLGVSAWDMIEKQAFKEIP 355
Query: 370 LDSQCVTKYLPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESSV 429
++ + +K+LP +MSLMVD + L+ K+P D+ E + + M + V
Sbjct: 356 VNDELASKFLPFIMSLMVDSSLNTLNGKVPEDDIEEGL--VSDGRHLAHHFMHMMVSNKV 413
Query: 430 CGVIAMYYTLHAAKLRDRGALLRILSILGSCKDGRAYEDPFLHALVALLVQLPDEFQGED 489
+A + LH +D+ A+ L S ++ LH LV LV + +EF +
Sbjct: 414 AFKLAWCFMLHLLHQKDKAAVFHALPWYVSPCQAHPLDEIELHILVTALVGMQEEFNQSE 473
Query: 490 FSTVLFDEFFFAGLSKDNVTRHLLKLLWYIHPKLPETRIQTLMKALQPGTQHNESVHKLY 549
F ++FD F S+ RH L+LLWY++PK+ ++ ++ + QP ++H +++H+L+
Sbjct: 474 FCDLIFDNFLLGLTSQTFAVRHTLRLLWYVYPKMDSHKVIHILTSTQPTSEHPDTIHELH 533
Query: 550 ETLQQKL--NAQTEPGPSATEMEYLDSPLMSVRTPAPY 585
L ++ + + PG S + + S S +P Y
Sbjct: 534 ALLVDRIANSNPSTPGSSQDQPSSVSSLGSSSHSPLEY 571
>UniRef50_Q54Q08 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 854
Score = 169 bits (411), Expect = 2e-40
Identities = 109/394 (27%), Positives = 179/394 (45%), Gaps = 23/394 (5%)
Query: 15 VGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXX---XXXXXHGVRRLDFHTS 71
+G G + +L++ T PL+ I +FQ ENGI H + R D + +
Sbjct: 6 IGNLGSEKILTSLSTTTYPLQFISQFQQENGISKKSLPTVSPVLNLLDLHQIPRGDLYLN 65
Query: 72 VLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNI-PHID 130
+L L++ L+ I FP + + L+ + M ++K + P +
Sbjct: 66 LLSSLKKDLLLKINTLNKHELEKLLEQT-------FPYIGFEELQEIPMNVMKRLTPEVP 118
Query: 131 DKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIRE-------KEDVLF 183
+L L ELY EVKRQIW N+ LF +++ PL++QYI + E +L
Sbjct: 119 VAFLLKLAEAEELYEQCPIEVKRQIWIVNEELFKEKIKPLINQYIEDPIFIQDMNEQLLL 178
Query: 184 DHENLTNLFFSPS--PKVRRQG-AVVQKLAHMIGT-SVKLYDMVLQXXXXXXXXXXNVHY 239
+ F+ S P RR+ +V+Q++ + GT S LY M + N
Sbjct: 179 SSSTTVDPLFAVSHLPAKRRENNSVLQEMVELFGTKSPDLYQMFINQIKRSFADSGNYLL 238
Query: 240 CTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFL-DSIKKG 298
C LRAE+LMA+HD + +I D H WCLDACIR+ +D +R +E+Q L S+
Sbjct: 239 CNLRAEILMAIHDKSIPEIYDTDASHNIAWCLDACIRDNTLDARRIKEIQTNLSSSVHHQ 298
Query: 299 QEQVLGDLSMTLCDPYAINFLATSAIKILQHLINTEGLPRDSTVXXXXXXXXXXXXSAWV 358
LGD +M +P A+N + + + L+ ++ + +P+D +
Sbjct: 299 NSSTLGDTAMVFANPIAVNCIVRNILIQLKEVVKRKQIPKDDESIKFLTYLLVLALKSHE 358
Query: 359 MIDSQEFKEPKLDSQCVTKYLPALMSLMVDDQVR 392
MI +FK P + + + P L + ++DD R
Sbjct: 359 MIKESKFKIPHVKKHILQTFYPLLATQILDDITR 392
>UniRef50_UPI0000E221F4 Cluster: PREDICTED: similar to A730008L03Rik
protein; n=1; Pan troglodytes|Rep: PREDICTED: similar to
A730008L03Rik protein - Pan troglodytes
Length = 336
Score = 118 bits (285), Expect = 3e-25
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 267 FTWCLDACIRERNVDIKRSRELQGFLDSIKKGQEQVLGDLSMTLCDPYAINFLATSAIKI 326
FTWCLDACIRER VD KR+RELQGFLD +KKGQEQVLGDLSM LCDP+AIN LA S ++
Sbjct: 26 FTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRH 85
Query: 327 LQHLINTEGLPRDS 340
LQ L+ E LPR S
Sbjct: 86 LQELVGQETLPRVS 99
Score = 81.0 bits (191), Expect = 8e-14
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 356 AWVMIDSQEFKEPKLDSQCVTKYLPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGP 415
AW MIDSQ FKEPK++ + +T++LP LMS +VDD + KLP +E+ + +
Sbjct: 171 AWDMIDSQVFKEPKMEVELITRFLPMLMSFLVDDYTFNVDQKLPAEEK----APVSYPNT 226
Query: 416 PPDACEAY---MRESSVCGVIAMYYTLHAAKLRDRGALLRILSILGSC 460
P++ Y ++E + + +YY LH K R++ ALLR+L L C
Sbjct: 227 LPESFTKYGLFLQEQRMACEVGLYYVLHITKQRNKNALLRLLPGLARC 274
>UniRef50_Q018S9 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 771
Score = 94.7 bits (225), Expect = 6e-18
Identities = 70/303 (23%), Positives = 130/303 (42%), Gaps = 30/303 (9%)
Query: 15 VGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDFHTSVLE 74
+G G F+ L+ TD ++E + + G+RR + + +LE
Sbjct: 35 IGGEGGDFIAATLSRATDVQASMERVRALGALSDRDAEPVLGLLSALGIRRGEAYREMLE 94
Query: 75 ELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPHIDDKYL 134
++LI + FP + ++ L+ V + + ++ + YL
Sbjct: 95 RATKELIRRVETLPQGTLLSLLDAS-------FPYIGIEELKAVPLAVFAHMSPVPSSYL 147
Query: 135 RVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREK---EDVLFDHENLTNL 191
+ + RD ++ EV+RQ W + L SP + Y E E ++ + LT L
Sbjct: 148 KQVSRDLVIFRQLPVEVQRQCWALDWQLLRRHASPSMMAYGEETATIEAMINQNIELTPL 207
Query: 192 F----FSPSP----------------KVRRQGAVVQKLAHMIGTSVKLYDMVLQXXXXXX 231
+SP K+R++ VQ+L +IG + +LY +++
Sbjct: 208 RADEDWSPREEGAKKKGDVSGTMNRQKIRKESESVQRLMRIIGKTPRLYIEIVRLCRAHF 267
Query: 232 XXXXNVHYCTLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGF 291
+ C+LR++LLMA HD ++ S+D CH+ W +D CIR+R +D +R +E+
Sbjct: 268 ANSGDDAACSLRSQLLMAFHDAGEMEMCSMDKCHRLAWLMDTCIRDRYLDGRRLKEMGTI 327
Query: 292 LDS 294
L++
Sbjct: 328 LET 330
Score = 36.3 bits (80), Expect = 2.3
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 300 EQVLGDLSMTLCDPYAINFLATSAIKILQHLINTEGLP-RDSTVXXXXXXXXXXXXSAWV 358
EQV GD+ M L DP ++ L ++ L+ +I E +P ++ + S
Sbjct: 388 EQVPGDMGMILADPPVLHLLLHETVRTLEGVIEAERVPAKERRLDDLTKFICLALTSQAC 447
Query: 359 MIDSQEFKEPKLDSQCVTKYLPALMSLMVDDQVRALHNKLPPDE 402
+++ + P + K+ P L LM+ +R + + +E
Sbjct: 448 LMEKVNY-IPATPKEICVKFFPLLSDLMLSVMLRESDDGIESEE 490
>UniRef50_Q7RN37 Cluster: CCAAT-box DNA binding protein subunit B,
putative; n=2; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA
binding protein subunit B, putative - Plasmodium yoelii
yoelii
Length = 1480
Score = 38.3 bits (85), Expect = 0.56
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 111 RVKALRPVIMGILKNIPHIDDKYLRVLVRD----RELYNDTDTEVKRQIWQDNQSLFGDE 166
+V+ ++P+ +L+ I I L+VLV D + Y T VKR+IW LF +E
Sbjct: 185 QVREIQPLFSMVLEKINIIPISILKVLVEDTPAAKYFYEITSINVKRKIWILCPELFFEE 244
Query: 167 VSPLLSQYIREKEDVLFDHENLTNL 191
V ++ + I + + H +TNL
Sbjct: 245 VEDIIEEIILRMK-LKNSHNYITNL 268
>UniRef50_Q8IKX1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1653
Score = 37.5 bits (83), Expect = 0.98
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 108 PVVRVKALRPVIMGILKNIPHIDDKYLRVLVRD----RELYNDTDTEVKRQIWQDNQSLF 163
P+ +V+ ++P+ +L+ I I K L +LV D + Y T VKR+IW F
Sbjct: 147 PMFQVREIQPLFSVLLEKINVIPVKILNILVEDTPAAQYFYEITCLNVKRKIWVMWAQKF 206
Query: 164 GDEVSPLLSQYIREKEDVLFDHENLTNL 191
+E+ L+ + I + + +HE + NL
Sbjct: 207 YEEIEQLVEEIIIHMK-LNDNHEYINNL 233
>UniRef50_Q4XL76 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 647
Score = 37.5 bits (83), Expect = 0.98
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 111 RVKALRPVIMGILKNIPHIDDKYLRVLVRD----RELYNDTDTEVKRQIWQDNQSLFGDE 166
+V+ ++P+ +L I I L+VLV D + Y T VKR+IW LF +E
Sbjct: 151 QVREIQPLFSMVLDKINIIPIDILKVLVEDTPAAKSFYEITSINVKRKIWILCPELFFEE 210
Query: 167 VSPLLSQYIREKEDVLFDHENLTNLFFS 194
V ++ + I + + +H +TNL S
Sbjct: 211 VEHIIEEIILRMK-LKNNHYYITNLINS 237
>UniRef50_A1ZTB7 Cluster: Chaperone ClpB, putative; n=1; Microscilla
marina ATCC 23134|Rep: Chaperone ClpB, putative -
Microscilla marina ATCC 23134
Length = 748
Score = 37.1 bits (82), Expect = 1.3
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 513 LKLLWYIHPKLPETRIQTLMKALQPGTQHNESVHKLYETLQQKLNA 558
+K W+ P++ TRI+T+ ++P Q ++ ++ + ETL+ K++A
Sbjct: 49 MKDSWFYEPEIGSTRIKTISMDIRPHYQESDRIYPVKETLEVKIDA 94
>UniRef50_Q2L5W5 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Clostridium perfringens
Length = 549
Score = 35.5 bits (78), Expect = 4.0
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 124 KNIPHIDDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGD-EVSPLLSQYIREKEDVL 182
K++ + ++++ L ++ N +T ++ + DN S+F D + +L +Y EKE +L
Sbjct: 305 KSVDDLAEEFISFLENIKKNKNKIETYIETCKYLDNDSMFRDNQFIKILEKYFNEKEIIL 364
Query: 183 FDHE 186
FD++
Sbjct: 365 FDNK 368
>UniRef50_P33275 Cluster: Uncharacterized protein MYCGA3080; n=2;
Mycoplasma gallisepticum|Rep: Uncharacterized protein
MYCGA3080 - Mycoplasma gallisepticum
Length = 308
Score = 35.1 bits (77), Expect = 5.3
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 151 VKRQIWQ-DN-QSLFGDEVSPLLSQYIREKEDVLFDHENLTNLFFSPSPKVRRQGAVVQK 208
+K QI Q DN Q+++ D+++ + ++++ K DV HE+ TN + + G +QK
Sbjct: 94 IKGQIEQLDNLQAIYIDDLTGIELEWVKSKYDVEIIHESSTNFLYETKKIMTLSGKSLQK 153
Query: 209 LAHMIGTSVKLYD 221
+ + +K Y+
Sbjct: 154 KRNHLNFFIKQYE 166
>UniRef50_Q0F4G5 Cluster: Putative uncharacterized protein; n=1;
alpha proteobacterium HTCC2255|Rep: Putative
uncharacterized protein - alpha proteobacterium HTCC2255
Length = 246
Score = 34.7 bits (76), Expect = 6.9
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 480 QLPDEFQGEDFSTVLFDEFFFA--GLSKDNVTRHLLKLLWYIHPKLPETR 527
+ PD F GE +T+L D+ F+ +S D++ ++ + HPK+ TR
Sbjct: 132 EFPDNFPGEVVTTLLLDQVIFSHEPISDDDMQPEQFAIIGHFHPKMQITR 181
>UniRef50_A5K3Q3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1669
Score = 34.7 bits (76), Expect = 6.9
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 108 PVVRVKALRPVIMGILKNIPHIDDKYLRVLVRD----RELYNDTDTEVKRQIWQDNQSLF 163
P+ +V+ ++P+ +L I I L+ LV + + Y T T+VKR+IW F
Sbjct: 148 PMFQVREMQPLFSLLLDKIDIIPIGILKTLVEETPSAQYFYEITSTKVKRKIWVLCPHKF 207
Query: 164 GDEVSPLLSQYI 175
+V P++ + I
Sbjct: 208 YQQVEPIIDEII 219
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.321 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,736,725
Number of Sequences: 1657284
Number of extensions: 22112196
Number of successful extensions: 50057
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 50025
Number of HSP's gapped (non-prelim): 19
length of query: 587
length of database: 575,637,011
effective HSP length: 105
effective length of query: 482
effective length of database: 401,622,191
effective search space: 193581896062
effective search space used: 193581896062
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 75 (34.3 bits)
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