Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001925-TA|BGIBMGA001925-PA|IPR010405|Cofactor of BRCA1
(587 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145659-1|AAD38634.1| 594|Drosophila melanogaster BcDNA.GH1033... 850 0.0
AE014298-1053|AAF46268.1| 594|Drosophila melanogaster CG32721-P... 850 0.0
AE014297-1489|AAF54787.1| 215|Drosophila melanogaster CG4181-PA... 31 3.4
BT029635-1|ABL75694.1| 118|Drosophila melanogaster IP17156p pro... 31 5.9
BT029609-1|ABL75668.1| 118|Drosophila melanogaster IP17056p pro... 31 5.9
BT029566-1|ABL75626.1| 115|Drosophila melanogaster IP16856p pro... 31 5.9
>AF145659-1|AAD38634.1| 594|Drosophila melanogaster BcDNA.GH10333
protein.
Length = 594
Score = 850 bits (2103), Expect = 0.0
Identities = 406/581 (69%), Positives = 464/581 (79%), Gaps = 4/581 (0%)
Query: 9 GTGLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDF 68
GTGLE+V +PGQ +LR+ALTSCTDPLKAIE FQLENG+ HGVRRLDF
Sbjct: 12 GTGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLPSLRPMLPLLDLHGVRRLDF 71
Query: 69 HTSVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPH 128
HTS++EELR+KLIAHI FPVVRVK+LRPV+M IL+N H
Sbjct: 72 HTSLMEELRDKLIAHINEMGQKEPRERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQH 131
Query: 129 IDDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHENL 188
IDDKYL++LVRDRELY DTDTEVKRQIW+DNQSLFGDEVSPLLSQYIREKE +LFDH NL
Sbjct: 132 IDDKYLKILVRDRELYADTDTEVKRQIWRDNQSLFGDEVSPLLSQYIREKEHILFDHTNL 191
Query: 189 TNLFFSPSPKVRRQGAVVQKLAHMIGTSVKLYDMVLQXXXXXXXXXXNVHYCTLRAELLM 248
NLFF P+PKVRRQG VVQKLA+MIGTSVKLYDMVLQ NVHYCTLRAELLM
Sbjct: 192 NNLFFHPTPKVRRQGEVVQKLANMIGTSVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLM 251
Query: 249 ALHDLEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDSIKKGQEQVLGDLSM 308
ALHDLEVQ+IIS+DPCHKFTWCLDACIRE+NVDIKRSRELQGFLD+IK+GQEQVLGDLSM
Sbjct: 252 ALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQGFLDNIKRGQEQVLGDLSM 311
Query: 309 TLCDPYAINFLATSAIKILQHLINTEGLPRDSTVXXXXXXXXXXXXSAWVMIDSQEFKEP 368
TLCDPYAINFLATSAIKIL HLIN EG+PRD+ + SAWVMIDSQ+FKEP
Sbjct: 312 TLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRMLALGLSAWVMIDSQDFKEP 371
Query: 369 KLDSQCVTKYLPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESS 428
KLD Q VTK+LPALMSLMVDDQ R+LH KLPPDERESA+TTIEHSGP PDA EAY++ESS
Sbjct: 372 KLDCQVVTKFLPALMSLMVDDQCRSLHAKLPPDERESALTTIEHSGPAPDAVEAYIQESS 431
Query: 429 VCGVIAMYYTLHAAKLRDRGALLRILSILGSCKDGRAYEDPFLHALVALLVQLPDEFQGE 488
V ++AMYYTLH A+L+DR +LR+L+IL +CKD RAYEDPFLH+L+ALL+ + +EF E
Sbjct: 432 VASILAMYYTLHTARLKDRVGVLRVLAILSACKDDRAYEDPFLHSLIALLIPMSEEFATE 491
Query: 489 DFSTVLFDEFFFAGLSKDNVT-RHLLKLLWYIHPKLPETRIQTLMKALQPGTQHNESVHK 547
DF T LFDEF FAGL+++NVT RH+LKLLWY+H KLP R+ TLMKA+QP T HNE +HK
Sbjct: 492 DFCTTLFDEFIFAGLTRENVTSRHMLKLLWYVHNKLPAGRLATLMKAMQPTTAHNEHIHK 551
Query: 548 LYETLQQKL--NAQTEPGPSATEMEYLDSPLMSVRTPAPYH 586
LYE LQ+++ A P A ME+ DSPL SV TP P++
Sbjct: 552 LYEILQERIGTGAAETPVIEAPPMEF-DSPLKSVPTPGPHY 591
>AE014298-1053|AAF46268.1| 594|Drosophila melanogaster CG32721-PA
protein.
Length = 594
Score = 850 bits (2103), Expect = 0.0
Identities = 406/581 (69%), Positives = 464/581 (79%), Gaps = 4/581 (0%)
Query: 9 GTGLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDF 68
GTGLE+V +PGQ +LR+ALTSCTDPLKAIE FQLENG+ HGVRRLDF
Sbjct: 12 GTGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLPSLRPMLPLLDLHGVRRLDF 71
Query: 69 HTSVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPH 128
HTS++EELR+KLIAHI FPVVRVK+LRPV+M IL+N H
Sbjct: 72 HTSLMEELRDKLIAHINEMGQKEPRERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQH 131
Query: 129 IDDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHENL 188
IDDKYL++LVRDRELY DTDTEVKRQIW+DNQSLFGDEVSPLLSQYIREKE +LFDH NL
Sbjct: 132 IDDKYLKILVRDRELYADTDTEVKRQIWRDNQSLFGDEVSPLLSQYIREKEHILFDHTNL 191
Query: 189 TNLFFSPSPKVRRQGAVVQKLAHMIGTSVKLYDMVLQXXXXXXXXXXNVHYCTLRAELLM 248
NLFF P+PKVRRQG VVQKLA+MIGTSVKLYDMVLQ NVHYCTLRAELLM
Sbjct: 192 NNLFFHPTPKVRRQGEVVQKLANMIGTSVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLM 251
Query: 249 ALHDLEVQDIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDSIKKGQEQVLGDLSM 308
ALHDLEVQ+IIS+DPCHKFTWCLDACIRE+NVDIKRSRELQGFLD+IK+GQEQVLGDLSM
Sbjct: 252 ALHDLEVQEIISIDPCHKFTWCLDACIREKNVDIKRSRELQGFLDNIKRGQEQVLGDLSM 311
Query: 309 TLCDPYAINFLATSAIKILQHLINTEGLPRDSTVXXXXXXXXXXXXSAWVMIDSQEFKEP 368
TLCDPYAINFLATSAIKIL HLIN EG+PRD+ + SAWVMIDSQ+FKEP
Sbjct: 312 TLCDPYAINFLATSAIKILHHLINNEGMPRDNQILILLLRMLALGLSAWVMIDSQDFKEP 371
Query: 369 KLDSQCVTKYLPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESS 428
KLD Q VTK+LPALMSLMVDDQ R+LH KLPPDERESA+TTIEHSGP PDA EAY++ESS
Sbjct: 372 KLDCQVVTKFLPALMSLMVDDQCRSLHAKLPPDERESALTTIEHSGPAPDAVEAYIQESS 431
Query: 429 VCGVIAMYYTLHAAKLRDRGALLRILSILGSCKDGRAYEDPFLHALVALLVQLPDEFQGE 488
V ++AMYYTLH A+L+DR +LR+L+IL +CKD RAYEDPFLH+L+ALL+ + +EF E
Sbjct: 432 VASILAMYYTLHTARLKDRVGVLRVLAILSACKDDRAYEDPFLHSLIALLIPMSEEFATE 491
Query: 489 DFSTVLFDEFFFAGLSKDNVT-RHLLKLLWYIHPKLPETRIQTLMKALQPGTQHNESVHK 547
DF T LFDEF FAGL+++NVT RH+LKLLWY+H KLP R+ TLMKA+QP T HNE +HK
Sbjct: 492 DFCTTLFDEFIFAGLTRENVTSRHMLKLLWYVHNKLPAGRLATLMKAMQPTTAHNEHIHK 551
Query: 548 LYETLQQKL--NAQTEPGPSATEMEYLDSPLMSVRTPAPYH 586
LYE LQ+++ A P A ME+ DSPL SV TP P++
Sbjct: 552 LYEILQERIGTGAAETPVIEAPPMEF-DSPLKSVPTPGPHY 591
>AE014297-1489|AAF54787.1| 215|Drosophila melanogaster CG4181-PA
protein.
Length = 215
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 281 DIKRSRELQGFLDSIKKGQEQVLGDLSMTLCDPYAINFLAT 321
D+KR GFLD+ +GQE V GD +T+ D ++ ++T
Sbjct: 126 DLKRIETAFGFLDTFLEGQEYVAGD-QLTVADIAILSTVST 165
>BT029635-1|ABL75694.1| 118|Drosophila melanogaster IP17156p
protein.
Length = 118
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 379 LPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESSVCG 431
LPA S +D VR LH +LP + E EH G C+A + ++ G
Sbjct: 21 LPAQQSRPAEDSVRQLHCELPGETDERG---NEHGGQSDHGCQAPANDGALPG 70
>BT029609-1|ABL75668.1| 118|Drosophila melanogaster IP17056p
protein.
Length = 118
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 379 LPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESSVCG 431
LPA S +D VR LH +LP + E EH G C+A + ++ G
Sbjct: 21 LPAQQSRPAEDSVRQLHCELPGETDERG---NEHGGQSDHGCQAPANDGALPG 70
>BT029566-1|ABL75626.1| 115|Drosophila melanogaster IP16856p
protein.
Length = 115
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 379 LPALMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESSVCG 431
LPA S +D VR LH +LP + E EH G C+A + ++ G
Sbjct: 18 LPAQQSRPAEDSVRQLHCELPGETDERG---NEHGGQSDHGCQAPANDGALPG 67
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.321 0.137 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,015,560
Number of Sequences: 52641
Number of extensions: 1022474
Number of successful extensions: 2286
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2276
Number of HSP's gapped (non-prelim): 6
length of query: 587
length of database: 24,830,863
effective HSP length: 89
effective length of query: 498
effective length of database: 20,145,814
effective search space: 10032615372
effective search space used: 10032615372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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