Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001923-TA|BGIBMGA001923-PA|IPR013098|Immunoglobulin
I-set, IPR013151|Immunoglobulin, IPR003599|Immunoglobulin subtype,
IPR003598|Immunoglobulin subtype 2, IPR007110|Immunoglobulin-like
(366 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 218 4e-59
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 218 bits (533), Expect = 4e-59
Identities = 123/365 (33%), Positives = 194/365 (53%), Gaps = 16/365 (4%)
Query: 3 WLQSDNTPVASLSGLRQILKNGSLEILPFTAELYRHDVHATVYRCRMRSSVGYIAMSKNI 62
W++SD T V + GLRQ+L NG+L PF AE YR +VHA VY C ++SVG + S+++
Sbjct: 57 WVRSDGTAVGDVPGLRQVLANGNLVFPPFRAEDYRQEVHAQVYVCLAKNSVGSV-HSRDV 115
Query: 63 HVYAALSSPWEVHVPDEYVIAGNAVVLRCVVPPHCADRISSTEWLNDDDINVLHYLG--S 120
+V A ++ +E V EYVI GN VL+C +P AD + W+ D H S
Sbjct: 116 NVRAVVNQYYEAEVVSEYVIRGNTAVLKCNIPSFVADFVRVEAWVGSDGSLYNHTANYDS 175
Query: 121 KYHRLDDGSLYISAVSTSDRHNRFLCRVRDKITGIRTAVNTLVSHVIVTEPKGGVKPRVS 180
KY L G L+I V D + + CR + ++TG T ++ +++TEP G P S
Sbjct: 176 KYLVLPSGELHIRDVGPEDGYKSYQCRTKHRLTG-ETRLSATKGRLVITEPVGTKAPAFS 234
Query: 181 VEQR--SRRIRVGQDVRLPCAVHAWPVPTYRWFFEHHEQLTPIEETTLWKRARLLDEGLL 238
+ + + Q+V L C +P P++RW ++ E T + TL R + + G L
Sbjct: 235 TDIKVLGYQRHSKQNVALLCPAQGFPSPSFRW-YKFVEGTTRKQAVTLNDRVKQV-AGTL 292
Query: 239 SIQKVRREDAGRFVCWLNNTVGSESVHFTLIVTEPISVRTKPEVLRSKPKSDIALDCKVN 298
I++ + ED+G+++C +NN+VG ESV L VT P+ + +P+V C
Sbjct: 293 IIREAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLKAKIEPQVQTIDFGRPATFTCNFE 352
Query: 299 GHPIELVYWLHNGRTLEPNERIEILEDGLRLHIKNTHKDDQGIYQCFASNARDQAYGMSE 358
G+PI+ + WL +G ++ NE + L I++ K+D+G+YQCF N ++ A +E
Sbjct: 353 GNPIKTISWLKDGHPIDHNEAV--------LRIESVRKEDKGMYQCFIRNDQESAEATAE 404
Query: 359 YLFDG 363
G
Sbjct: 405 LKLGG 409
Score = 60.5 bits (140), Expect = 2e-11
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 128 GSLYISAVSTSDRHNRFLCRVRDKITGIRTAVNTLVSHVIVTEPKGGVKPRVSVEQRSRR 187
G+L I D ++LC V + + G +V T+++ VT P + +E + +
Sbjct: 290 GTLIIREAKVEDS-GKYLCVVNNSVGG--ESVETVLT---VTAPL-----KAKIEPQVQT 338
Query: 188 IRVGQDVRLPCAVHAWPVPTYRWFFEHHEQLTPIEETTLWKRARLLDEGLLSIQKVRRED 247
I G+ C P+ T W + H PI+ +E +L I+ VR+ED
Sbjct: 339 IDFGRPATFTCNFEGNPIKTISWLKDGH----PIDH----------NEAVLRIESVRKED 384
Query: 248 AGRFVCWLNNTVGSESVHFTLIVT---EPISVRTKPEVLRSKPKSDIALDCKVNGHPIEL 304
G + C++ N S L + EP +R +P + + L C +G+P
Sbjct: 385 KGMYQCFIRNDQESAEATAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIASGNPTPE 444
Query: 305 VYWLHNGRTLEPNERIEILE----DG---LRLHIKNTHKDDQGIYQCFASN 348
+ W GR L +ER +I + +G L+I H +D G+Y+C AS+
Sbjct: 445 ITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVASS 495
Score = 55.6 bits (128), Expect = 5e-10
Identities = 78/321 (24%), Positives = 122/321 (38%), Gaps = 33/321 (10%)
Query: 38 HDVHATVYRCRMRSSVGYIAMSKNIHVYAALSSPWEVHVPDEYVIAGNAVVLRCVVPPHC 97
H +YRC S VG S I+VY P+ + + ++AG +++ C P
Sbjct: 482 HTNDGGLYRCVASSKVGSADHSARINVYGL---PFVRSMEKQAIVAGGTLIVHC---PFA 535
Query: 98 ADRISSTEWLNDDDINVLHYLGSKYHRLDDGSLYISAVSTSDRHNRFLCRVRDKITGIRT 157
+ S W D ++ K +G+L I V + + C ++ G +
Sbjct: 536 GHPVDSVVWERDGRQLPIN---RKQKVFINGTLIIENVERASDQATYDCVAKNS-QGY-S 590
Query: 158 AVNTLVSHVIVTEPKGGVKPRVSVEQRSRRIRVGQDVRLPCAVHAWPVP-TYRWFFEHH- 215
A +L V+V P+ + P E I G V + C V P W H
Sbjct: 591 ARGSLEVQVMVP-PQ--ILPFDFGEDS---INEGDGVSVQCTVSKGDYPLNISWTLNGHF 644
Query: 216 -EQLTPIEETTLWKRARLLDEGLLSIQKVRREDAGRFVCWLNNTVGSESVHFTLIVTEPI 274
+Q I KR LSI V+ G + C +N+ + +L + P
Sbjct: 645 IDQTNGIVINRASKRV-----STLSIDNVQSTHVGNYTCLASNSASVTTYTTSLFINVPP 699
Query: 275 SVRTKPEVLRSKPKSDIALDCKVNGHPIELVYWLH-------NGRTLEPNERIEILEDGL 327
+P SD A++CK +G P +V W + + +PN +EDG
Sbjct: 700 RWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRATGVSPGDYKDFKPNNPDIKVEDG- 758
Query: 328 RLHIKNTHKDDQGIYQCFASN 348
L I N K ++G Y C A N
Sbjct: 759 TLTINNIQKTNEGYYLCEAVN 779
Score = 54.8 bits (126), Expect = 9e-10
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 9/184 (4%)
Query: 175 VKPRVSVEQRSRRIRVGQDVRLPCAVHAWPVPTYRWFFEHHEQLTPIEETTLWKRARLLD 234
V PR +E + G D + C +P P W ++ ++
Sbjct: 697 VPPRWILEPTDKAFAQGSDAAVECKADGFPRPVVTWKRATGVSPGDYKDFKPNNPDIKVE 756
Query: 235 EGLLSIQKVRREDAGRFVCWLNNTVGSE-SVHFTLIVTEPISVRTKPEVLRSKPKSDIAL 293
+G L+I +++ + G ++C N +GS S + V P K S+ L
Sbjct: 757 DGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVL 816
Query: 294 DCKVNGHPIELVYWLHNGRTLEPNE------RIEILEDGLR--LHIKNTHKDDQGIYQCF 345
C+ G + W N + LEP R EIL +G+ L IK T + D ++ C
Sbjct: 817 QCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCV 876
Query: 346 ASNA 349
A+NA
Sbjct: 877 ATNA 880
Score = 52.4 bits (120), Expect = 5e-09
Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 6/177 (3%)
Query: 177 PRVSVEQRSRRIRVGQDVRLPCAVHAWPVPTYRWFFEHHEQLTPIEETTLWKRARLLDEG 236
P++ ++ G V L C P P W + +L+ E + + + +
Sbjct: 414 PQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWEL-YGRRLSNSERNQIGQYVTVNGDV 472
Query: 237 L--LSIQKVRREDAGRFVCWLNNTVGSESVHFTLIVTEPISVRTKPEVLRSKPKSDIALD 294
+ L+I + D G + C ++ VGS H I + E + +
Sbjct: 473 VSHLNITAIHTNDGGLYRCVASSKVGSAD-HSARINVYGLPFVRSMEKQAIVAGGTLIVH 531
Query: 295 CKVNGHPIELVYWLHNGRTLEPNERIEILEDGLRLHIKNTHK-DDQGIYQCFASNAR 350
C GHP++ V W +GR L N + ++ +G L I+N + DQ Y C A N++
Sbjct: 532 CPFAGHPVDSVVWERDGRQLPINRKQKVFING-TLIIENVERASDQATYDCVAKNSQ 587
Score = 45.6 bits (103), Expect = 6e-07
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 152 ITGIRTAVNTLVSHVIVTEPKGGVKPRVSVEQRSRRIRVGQDVRLPCAVHAWPVPTYRWF 211
+T T S + P V +++ + +DV LPC P P W
Sbjct: 1282 VTAATTIGEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITW- 1340
Query: 212 FEHHEQLTPIEETTLWKRARLLDEGLLSIQKVRREDAGRFVCWLNNTVGSESVHFTLIVT 271
++ ++ TT K R +G L I+ V R +AG + C + N G +SV LIV
Sbjct: 1341 -----KIKGVQFTTSDK-IRQQPDGSLFIRDVSRNNAGEYSCHVENDYGQDSVTHQLIVN 1394
Query: 272 EP 273
P
Sbjct: 1395 AP 1396
Score = 43.2 bits (97), Expect = 3e-06
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 124 RLDDGSLYISAVSTSDRHNRFLCRVRDKITGIRTAVNTLVSHVIVTEPKGGVKPRVSVEQ 183
+++DG+L I+ + ++ +LC + + GI + ++ ++ + P+ +K R Q
Sbjct: 754 KVEDGTLTINNIQKTNE-GYYLC---EAVNGIGSGLSAVIQISVQAPPQFDIKLR---NQ 806
Query: 184 RSRRIRVGQDVRLPCAVHAWPVPTYRWFFEHHEQLTPIEETTLWKRARLLDEGLLS---I 240
SRR G L C W ++++L P + R +L G+LS I
Sbjct: 807 TSRR---GDPAVLQCEAKGEKPIGILWNI-NNKRLEPKGDNRYTIREEILANGVLSGLSI 862
Query: 241 QKVRREDAGRFVCWLNNTVGSESVHFTLIVTEPISVRTKPEVLRSKPKS 289
++ R D+ F C N GS+ +IV E V +VL +S
Sbjct: 863 KRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRS 911
Score = 35.5 bits (78), Expect = 6e-04
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 261 SESVHFTLIVTEPISVRTKPEVLRSKPKSDIALDCKVNGHPIELVYWLHNGRTLEPNERI 320
S+ V + + P + + + + K D+ L C G P ++ W G +++I
Sbjct: 1294 SKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITWKIKGVQFTTSDKI 1353
Query: 321 EILEDGLRLHIKNTHKDDQGIYQCFASN 348
DG L I++ +++ G Y C N
Sbjct: 1354 RQQPDG-SLFIRDVSRNNAGEYSCHVEN 1380
Score = 27.1 bits (57), Expect = 0.21
Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 18/164 (10%)
Query: 194 VRLPCAVHAWPVPTYRWFFEHHEQLTPIEETTLWKRARLLDEGLLSIQKVRR-EDAGRFV 252
V P A H PV + W E + PI ++ ++ G L I+ V R D +
Sbjct: 530 VHCPFAGH--PVDSVVW--ERDGRQLPIN-----RKQKVFINGTLIIENVERASDQATYD 580
Query: 253 CWLNNTVGSESVHFTLIVTEPISVRTKPEVLRSKPKSD---IALDCKVNGHPIEL-VYWL 308
C N+ G S +L V + + P ++ +++ C V+ L + W
Sbjct: 581 CVAKNSQGY-SARGSLEVQVMVPPQILPFDFGEDSINEGDGVSVQCTVSKGDYPLNISWT 639
Query: 309 HNGRTLEPNERIEILEDGLR---LHIKNTHKDDQGIYQCFASNA 349
NG ++ I I R L I N G Y C ASN+
Sbjct: 640 LNGHFIDQTNGIVINRASKRVSTLSIDNVQSTHVGNYTCLASNS 683
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 273 PISVRTKPEVLRSKPKSDIALDCKVNGHPIELVYWLHNGRT 313
P+ VR P + + ++C +G+P + W+ + T
Sbjct: 23 PVFVREPPNRIDFSNTTGAVVECSAHGNPTPDIIWVRSDGT 63
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.321 0.136 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,056
Number of Sequences: 317
Number of extensions: 3658
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 11
length of query: 366
length of database: 114,650
effective HSP length: 58
effective length of query: 308
effective length of database: 96,264
effective search space: 29649312
effective search space used: 29649312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)
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