GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001923-TA|BGIBMGA001923-PA|IPR013098|Immunoglobulin
I-set, IPR013151|Immunoglobulin, IPR003599|Immunoglobulin subtype,
IPR003598|Immunoglobulin subtype 2, IPR007110|Immunoglobulin-like
         (366 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     24   7.6  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            24   7.6  

>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 6/56 (10%)

Query: 149 RDKITGIRTAVNTLVSHVIVTEPKGGVKPRVSVEQRSRRIRVGQDVRLPCAVHAWP 204
           R    G+R  V+ +++H+  T+P   V+P +     +    +  D + P     WP
Sbjct: 109 RCNAAGVRLYVDIIINHMGATQP---VEPAIGTGSST---AIPSDRQFPAVPFGWP 158


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 4/38 (10%)

Query: 198 CAVHAWPVPTYRWFFE----HHEQLTPIEETTLWKRAR 231
           C VH  PV  YR  FE     H  L  +++  + K+ R
Sbjct: 330 CTVHGGPVDEYRLPFEAELGPHPTLEEMQDNVVTKKLR 367


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.136    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,510
Number of Sequences: 2123
Number of extensions: 16464
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 2
length of query: 366
length of database: 516,269
effective HSP length: 65
effective length of query: 301
effective length of database: 378,274
effective search space: 113860474
effective search space used: 113860474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 49 (23.8 bits)