GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001922-TA|BGIBMGA001922-PA|undefined
         (57 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M61127-1|AAA28365.1|  180|Drosophila melanogaster GTP-binding pr...    26   7.2  
BT001460-1|AAN71215.1|  180|Drosophila melanogaster GM20805p pro...    26   7.2  
AE014296-2610|AAF49556.2|  180|Drosophila melanogaster CG6025-PA...    26   7.2  

>M61127-1|AAA28365.1|  180|Drosophila melanogaster GTP-binding
           protein protein.
          Length = 180

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 1   MTVCDKHN-LGVEFASRTKFQLAQNKAAKSEG 31
           MTV + H+ LG+E      FQ+ +  A K EG
Sbjct: 133 MTVAEVHHALGLENLKNRTFQIFKTSATKGEG 164


>BT001460-1|AAN71215.1|  180|Drosophila melanogaster GM20805p
           protein.
          Length = 180

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 1   MTVCDKHN-LGVEFASRTKFQLAQNKAAKSEG 31
           MTV + H+ LG+E      FQ+ +  A K EG
Sbjct: 133 MTVAEVHHALGLENLKNRTFQIFKTSATKGEG 164


>AE014296-2610|AAF49556.2|  180|Drosophila melanogaster CG6025-PA
           protein.
          Length = 180

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 1   MTVCDKHN-LGVEFASRTKFQLAQNKAAKSEG 31
           MTV + H+ LG+E      FQ+ +  A K EG
Sbjct: 133 MTVAEVHHALGLENLKNRTFQIFKTSATKGEG 164


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.124    0.333 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,153,809
Number of Sequences: 52641
Number of extensions: 48001
Number of successful extensions: 134
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 134
Number of HSP's gapped (non-prelim): 3
length of query: 57
length of database: 24,830,863
effective HSP length: 38
effective length of query: 19
effective length of database: 22,830,505
effective search space: 433779595
effective search space used: 433779595
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)