Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001921-TA|BGIBMGA001921-PA|IPR004000|Actin/actin-like
(418 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 675 0.0
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 252 3e-67
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 252 3e-67
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 252 3e-67
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 252 3e-67
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 252 3e-67
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 252 3e-67
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 252 5e-67
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 251 8e-67
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 248 4e-66
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 239 3e-63
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 233 1e-61
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 204 1e-52
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 195 4e-50
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 132 6e-31
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 78 1e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 78 1e-14
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 60 4e-09
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 60 4e-09
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 59 5e-09
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 56 4e-08
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 30 2.7
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 30 2.7
AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical ... 29 4.6
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 29 6.1
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 675 bits (1667), Expect = 0.0
Identities = 311/420 (74%), Positives = 352/420 (83%), Gaps = 6/420 (1%)
Query: 5 LPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKE-TAKVGDQSTR---RMTKAVEDLDF 60
LPACVID GTGYTKLG+AGN EPQFIIPS IA+K+ A Q+ R R+ ++DLDF
Sbjct: 6 LPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDF 65
Query: 61 FIGDEAFE--ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLN 118
FIGDEA AT Y+VKYP+RHGIVEDWDLMERY EQC+FKYLRAEPEDH FL+TEPPLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 119 TPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIV 178
TPENREY AEIMFESFNVPGLYIAVQAVLAL ASW SR + ER+ TG+V+DSGDGVTH +
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCI 185
Query: 179 PVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDI 238
PVA+GYVIGSCIKHIPIAGR+IT FIQSLLR+RE IP EQS E AK IKEK+ Y+CPD+
Sbjct: 186 PVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDV 245
Query: 239 AKEFAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNE 298
KEF KYD+D KW++ Y GIN+ITK PF VDVGYERFLGPEIFFHPEF N +FT P+++
Sbjct: 246 MKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISD 305
Query: 299 MVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRI 358
+D +IQ CPIDVRRGLY NIVLSGGSTMF+DF R+LQRD+KR D RL++S LS GR+
Sbjct: 306 TIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRL 365
Query: 359 TPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSICRHNPVFGTMT 418
PKPIDVQV+SH MQRYAVWFGGSMLAST EFYQV HTK YME GPSICR+NPVFG +T
Sbjct: 366 KPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSICRYNPVFGALT 425
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 252 bits (618), Expect = 3e-67
Identities = 148/406 (36%), Positives = 216/406 (53%), Gaps = 40/406 (9%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 121
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 122 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 181
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKE 241
EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D +E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 242 FAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVD 301
A S K Y + + VG ERF PE F P F + + ++E
Sbjct: 228 MATAASS-SSLEKSYE-----LPDGQVITVGNERFRCPEAMFQPSFLGME-SAGIHETSY 280
Query: 302 EVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPK 361
I C ID+R+ LY N VLSGG+TM+ R+Q++I + P
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPS 324
Query: 362 PIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
+ +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 252 bits (618), Expect = 3e-67
Identities = 149/406 (36%), Positives = 216/406 (53%), Gaps = 40/406 (9%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 121
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 122 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 181
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIY 167
Query: 182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKE 241
EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D +E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 242 FAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVD 301
A S K Y + + VG ERF PE F P F + + ++E
Sbjct: 228 MATAASS-SSLEKSYE-----LPDGQVITVGNERFRCPEALFQPSFLGME-SAGIHETSY 280
Query: 302 EVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPK 361
I C ID+R+ LY N VLSGG+TM+ R+Q++I + P
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPS 324
Query: 362 PIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
+ +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 252 bits (618), Expect = 3e-67
Identities = 148/406 (36%), Positives = 216/406 (53%), Gaps = 40/406 (9%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 121
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 122 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 181
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKE 241
EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D +E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 242 FAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVD 301
A S K Y + + VG ERF PE F P F + + ++E
Sbjct: 228 MATAASS-SSLEKSYE-----LPDGQVITVGNERFRCPEAMFQPSFLGME-SAGIHETSY 280
Query: 302 EVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPK 361
I C ID+R+ LY N VLSGG+TM+ R+Q++I + P
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPS 324
Query: 362 PIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
+ +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 252 bits (618), Expect = 3e-67
Identities = 148/406 (36%), Positives = 216/406 (53%), Gaps = 40/406 (9%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 121
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 122 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 181
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKE 241
EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D +E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 242 FAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVD 301
A S K Y + + VG ERF PE F P F + + ++E
Sbjct: 228 MATAASS-SSLEKSYE-----LPDGQVITVGNERFRCPEALFQPSFLGME-SAGIHETSY 280
Query: 302 EVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPK 361
I C ID+R+ LY N VLSGG+TM+ R+Q++I + P
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPS 324
Query: 362 PIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
+ +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 252 bits (618), Expect = 3e-67
Identities = 148/406 (36%), Positives = 216/406 (53%), Gaps = 40/406 (9%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 121
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 122 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 181
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKE 241
EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D +E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 242 FAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVD 301
A S K Y + + VG ERF PE F P F + + ++E
Sbjct: 228 MATAASS-SSLEKSYE-----LPDGQVITVGNERFRCPEAMFQPSFLGME-SAGIHETSY 280
Query: 302 EVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPK 361
I C ID+R+ LY N VLSGG+TM+ R+Q++I + P
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPS 324
Query: 362 PIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
+ +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 252 bits (618), Expect = 3e-67
Identities = 148/406 (36%), Positives = 216/406 (53%), Gaps = 40/406 (9%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 121
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 122 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 181
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKE 241
EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D +E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 242 FAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVD 301
A S K Y + + VG ERF PE F P F + + ++E
Sbjct: 228 MATAASS-SSLEKSYE-----LPDGQVITVGNERFRCPEALFQPSFLGME-SAGIHETSY 280
Query: 302 EVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPK 361
I C ID+R+ LY N VLSGG+TM+ R+Q++I + P
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPS 324
Query: 362 PIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
+ +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 252 bits (616), Expect = 5e-67
Identities = 148/406 (36%), Positives = 216/406 (53%), Gaps = 40/406 (9%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A ++D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALILDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 121
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 122 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 181
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIY 167
Query: 182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKE 241
EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D +E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 242 FAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVD 301
A S K Y + + VG ERF PE F P F + + ++E
Sbjct: 228 MATAASS-SSLEKSYE-----LPDGQVITVGNERFRCPEALFQPSFLGME-SAGIHETSY 280
Query: 302 EVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPK 361
I C ID+R+ LY N VLSGG+TM+ R+Q++I + P
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPS 324
Query: 362 PIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
+ +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 370
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 251 bits (614), Expect = 8e-67
Identities = 145/408 (35%), Positives = 218/408 (53%), Gaps = 40/408 (9%)
Query: 1 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 60
M + + A V+D G+G K GFAG+ P+ + PS VG + + + D
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS 52
Query: 61 FIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNT 119
++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 53 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 112
Query: 120 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVP 179
NRE + +IMFE+FN P +Y+ +QAVL+L AS ++ TGIV+D+GDGVTH VP
Sbjct: 113 KSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRT--------TGIVLDTGDGVTHTVP 164
Query: 180 VAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIA 239
+ EGY + I+ + +AGR++T ++ +L ER E + IKEK Y+ D
Sbjct: 165 IYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFE 224
Query: 240 KEFAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEM 299
E A S K Y + + +G ERF PE+ F P F + ++E
Sbjct: 225 SELAAAASS-SSLEKSYE-----LPDGQVITIGNERFRCPEVLFQPAFIGME-GAGIHET 277
Query: 300 VDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRIT 359
+ I C +D+R+ LY N VLSGG++MF R+Q++I+ +
Sbjct: 278 TYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQ----------------HLA 321
Query: 360 PKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
P + +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 369
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 248 bits (608), Expect = 4e-66
Identities = 149/406 (36%), Positives = 217/406 (53%), Gaps = 41/406 (10%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 121
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 122 NREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVA 181
NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIY 167
Query: 182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKE 241
EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D +E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 242 FAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVD 301
A S K Y + + VG ERF PE F P F + + ++E
Sbjct: 228 MATAASS-SSLEKSYE-----LPDGQVITVGNERFRCPEAMFQPSFLGME-SAGIHETSY 280
Query: 302 EVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPK 361
I C ID+R+ LY N VLSGG+TM+ R+Q++I T L+
Sbjct: 281 NSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI-----------TALA------P 323
Query: 362 PIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
+ +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 324 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 369
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 239 bits (585), Expect = 3e-63
Identities = 141/391 (36%), Positives = 207/391 (52%), Gaps = 40/391 (10%)
Query: 18 KLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGY-SVKY 76
+ GFAG+ P+ + PS VG + + + D ++GDEA G ++KY
Sbjct: 5 RAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 56
Query: 77 PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNV 136
P+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN
Sbjct: 57 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 137 PGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIA 196
P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +A
Sbjct: 117 PAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 168
Query: 197 GRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKEFAKYDSDPGKWMKKY 256
GR++T ++ +L ER E + IKEK Y+ D +E A S K Y
Sbjct: 169 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS-SSLEKSY 227
Query: 257 TGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLY 316
+ + VG ERF PE F P F + + ++E I C ID+R+ LY
Sbjct: 228 E-----LPDGQVITVGNERFRCPEALFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLY 281
Query: 317 GNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYA 376
N VLSGG+TM+ R+Q++I + P + +++++ ++Y+
Sbjct: 282 ANTVLSGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYS 325
Query: 377 VWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 326 VWIGGSILASLSTFQQMWISKQEYDESGPSI 356
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 233 bits (571), Expect = 1e-61
Identities = 132/350 (37%), Positives = 191/350 (54%), Gaps = 32/350 (9%)
Query: 59 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 117
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 8 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 67
Query: 118 NTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHI 177
N NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH
Sbjct: 68 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHT 119
Query: 178 VPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPD 237
VP+ EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D
Sbjct: 120 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 179
Query: 238 IAKEFAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLN 297
+E A S K Y + + VG ERF PE F P F + + ++
Sbjct: 180 FEQEMATAASS-SSLEKSYE-----LPDGQVITVGNERFRCPEALFQPSFLGME-SAGIH 232
Query: 298 EMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGR 357
E I C ID+R+ LY N VLSGG+TM+ R+Q++I
Sbjct: 233 ETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------A 276
Query: 358 ITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
+ P + +++++ ++Y+VW GGS+LAS F Q+ +KQ Y E GPSI
Sbjct: 277 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 326
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 204 bits (497), Expect = 1e-52
Identities = 135/401 (33%), Positives = 216/401 (53%), Gaps = 48/401 (11%)
Query: 9 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 68
VID G+G K GFAG ++P+ ++ VG R+ D D FIG +A
Sbjct: 12 VIDNGSGVIKAGFAGEQQPK--------VRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
Query: 69 ATG-YSVKYPVRHGIVEDWDLMERYIEQCVFK-YLRAEPEDHHFLMTEPPLNTPENREYL 126
G +S++YP+ HGIV +W ME+ E + L+ PE+H L+T+ PLN +NRE
Sbjct: 64 NRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERS 123
Query: 127 AEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVI 186
AEI FE+FNVP LYI +QAVL+L A+ ++ TG+V+DSGDGVTH VP+ +G+ +
Sbjct: 124 AEIFFETFNVPALYIQMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIVKGFAM 175
Query: 187 GSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKEFAKYD 246
I+ + +AGR++T +++ LLR E + +KE Y+ D K + +
Sbjct: 176 KHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALDPTK--VENN 233
Query: 247 SDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVDEVIQS 306
S +K + TK +++ F PE+ F P+ ++ + +V++ I
Sbjct: 234 S-----VKSSYALPDTTK----IEISNSLFRAPEVLFKPDLIGTEWP-GMAHVVNQSIMK 283
Query: 307 CPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPKPIDVQ 366
C +D+R+ LY NIVLSGG+T+F+ FG RL ++++ A +G+I
Sbjct: 284 CDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPA---------DGKIR------- 327
Query: 367 VVSHNMQRYAV-WFGGSMLASTPEFYQVCHTKQAYMEYGPS 406
+S + +R ++ W GGS++AS F ++ K+ Y + G S
Sbjct: 328 -ISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGAS 367
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 195 bits (476), Expect = 4e-50
Identities = 126/383 (32%), Positives = 201/383 (52%), Gaps = 34/383 (8%)
Query: 9 VIDVGTGYTKLGFAGNKEPQFIIPSTIA---IKETAKVGDQSTRRMTKAVEDLDFFIGDE 65
V+D GTG+ K G+AG P I PS + ++ T +VG+ +E D +G+E
Sbjct: 10 VVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGN---------IEIKDLMVGEE 60
Query: 66 AFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVF-KYLRAEPEDHHFLMTEPPLNTPENR 123
+ + YP+ +GIV +WD M + + L +P++ L+TEPPLN NR
Sbjct: 61 CSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR 120
Query: 124 EYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEG 183
E + ++MFE + +Y+AVQAVL L A + TG+VVDSGDGVTHI PV EG
Sbjct: 121 EKMFQVMFEQYGFNSIYVAVQAVLTLYA--------QGLLTGVVVDSGDGVTHICPVYEG 172
Query: 184 YVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKEFA 243
+ + + + IAGR+IT ++ LL +R ET + +KEK YI D+ +E
Sbjct: 173 FALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQE-E 231
Query: 244 KYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVDEV 303
+ + ++YT + + +G ERF PEI F P N + L+E++
Sbjct: 232 RLALETTVLSQQYT-----LPDGRVIRLGGERFEAPEILFQPHLINVE-KAGLSELLFGC 285
Query: 304 IQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPKPI 363
IQ+ ID R Y +IVLSGG+TM+ RL++++K +L L +L +
Sbjct: 286 IQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELK-----QLYLDRVLHGNTDAFQKF 340
Query: 364 DVQVVSHNMQRYAVWFGGSMLAS 386
+++ + +++ V+ GG++LA+
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLAN 363
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 132 bits (318), Expect = 6e-31
Identities = 115/444 (25%), Positives = 193/444 (43%), Gaps = 59/444 (13%)
Query: 2 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETA--------KVGDQSTRRMTK 53
GD + V D G+ ++GFAG + P+ IPS IA++E + ++ +
Sbjct: 8 GDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQ 67
Query: 54 AVEDLDFFIGDEAF--EATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFL 111
+ +FFIG +++ ++ G++EDW+L E+ +E L + P +H L
Sbjct: 68 TKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVL 127
Query: 112 MTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSG 171
+E N RE L EIMFE F VP Y++ VL+ A ++ G++VDSG
Sbjct: 128 FSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTH--------GLMVDSG 179
Query: 172 DGVTHIVPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPP------EQSLETAK 225
T +VPV +GY + + PI G IT + +L ++++ + P ++ + +
Sbjct: 180 ATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGKEEVNEGE 239
Query: 226 AIKEKYSYICPDIAKEFAKYD-----SDPGKWMKKY--TGINA--ITKNP---------F 267
A K P + K + + D M + T I+ + K P +
Sbjct: 240 APKWTPRKNLPQVTKSYDAFMKKMLLEDMAATMLQLCDTSIDMDYVDKLPSTPYAFPNGY 299
Query: 268 TVDVGYERFLGPEIFFHPEFSNA----DFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSG 323
T + G ER PE F + A D + + +M ID+R L+ N+ ++G
Sbjct: 300 TKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTG 359
Query: 324 GSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSM 383
G+++ F RL + +KL R+ P + ++Y W GGS+
Sbjct: 360 GNSLILGFTERLNYALATKCPPTIKL-------RVFAAPTQAE------RKYGAWIGGSI 406
Query: 384 LASTPEFYQVCHTKQAYMEYGPSI 407
L S F Q+ +K Y E G SI
Sbjct: 407 LGSLGTFQQMWVSKAEYDESGKSI 430
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 83.4 bits (197), Expect = 3e-16
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 164 TGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLET 223
TG+VVD G+ V +IVPV +GYV+ S I IP + + +++ L G+ QS
Sbjct: 322 TGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVE 380
Query: 224 AKAIK---EKYSYICPDIAKEFAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPE 280
++ E+ +Y+ D KE + + + +T + D+ RFL E
Sbjct: 381 KLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTR---FDIDNSRFLCTE 437
Query: 281 IFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIK 340
F P+ D T L++++ E I CPID RR LY NI L+GG+++ +L++++
Sbjct: 438 GLFKPKKWGLD-TKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELS 496
Query: 341 RAVDARLKLSTMLSEGRITPKPIDVQVVS 369
V + +S R + Q+V+
Sbjct: 497 TVVPNTIHTQVNISPWRYNAAYLGAQIVA 525
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 78.2 bits (184), Expect = 1e-14
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 27/309 (8%)
Query: 61 FIGDEAFEATG-YSVKY--PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 117
F+ E E + +S+ Y P+ G V +WD ++ E+ F + E +T+
Sbjct: 43 FVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEK-TFGSMDVEASTSRIALTDNNY 101
Query: 118 NTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHI 177
P + +EI+F+ F ++ + L A ++ + E+ +VVDSG T +
Sbjct: 102 LIPALPDVSSEILFDYFGFTEVHKT--SASTLVAKHSNKINNEKC--AVVVDSGFSWTTV 157
Query: 178 VPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICP- 236
G +I + I + G+ +T+ ++ + R++ + E + KE ++
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYRQLNVSEETYV--INECKEDLCFVSQN 215
Query: 237 -DIAKEFAKYDSDPGKWMKKYT---------GINAITKNPF-----TVDVGYERFLGPEI 281
D + + A+ MK+Y G+ K P ++ +G ERF PEI
Sbjct: 216 FDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEI 275
Query: 282 FFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKR 341
F+P + D + E V E I CP +R L NI++ GGS+ F F RL+R+++
Sbjct: 276 LFNPSDIDID-QCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRS 334
Query: 342 AVDARLKLS 350
+ A L+
Sbjct: 335 MLPAEYGLN 343
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 77.8 bits (183), Expect = 1e-14
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 27/309 (8%)
Query: 61 FIGDEAFEATG-YSVKY--PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 117
F+ E E + +S+ Y P+ G V +WD ++ E+ F + E +T+
Sbjct: 43 FVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEK-TFGSMDVEASTSRIALTDNNY 101
Query: 118 NTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHI 177
P + +EI+F+ F ++ + L A ++ + E+ +VVDSG T +
Sbjct: 102 LIPALPDVSSEILFDYFGFTEVHKT--SASTLVAKHSNKINNEKC--AVVVDSGFSWTTV 157
Query: 178 VPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICP- 236
G +I + I + G+ +T+ ++ + R++ + E + KE ++
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYRQLNVSEETYV--INECKEDLCFVSQN 215
Query: 237 -DIAKEFAKYDSDPGKWMKKY---------TGINAITKNPF-----TVDVGYERFLGPEI 281
D + + A+ MK+Y G+ K P ++ +G ERF PEI
Sbjct: 216 FDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEI 275
Query: 282 FFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKR 341
F+P + D + E V E I CP +R L NI++ GGS+ F F RL+R+++
Sbjct: 276 LFNPSDIDID-QCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRS 334
Query: 342 AVDARLKLS 350
+ A L+
Sbjct: 335 MLPAEYGLN 343
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 59.7 bits (138), Expect = 4e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATG-YSVKYPVRHGIVEDWDLMER 91
GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 59.7 bits (138), Expect = 4e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATG-YSVKYPVRHGIVEDWDLMER 91
GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 59.3 bits (137), Expect = 5e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATG-YSVKYPVRHGIVEDWDLMER 91
GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 56.4 bits (130), Expect = 4e-08
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 63 GDEAFEATG-YSVKYPVRHGIVEDWDLM 89
GDEA G ++KYP+ HGIV +WD M
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 50.4 bits (115), Expect = 2e-06
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 280 EIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDI 339
EIFF+ + F + L +++ +++ CPID+R+ L+ NI+L+GG + +RL+++I
Sbjct: 174 EIFFNENLNPTSFDLSLPKLLHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEI 233
Query: 340 KRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPE 389
+ +D + S+ + K + N + W G S+L S E
Sbjct: 234 -QVIDEKNN-----SKIAVIVKFYQFSEIK-NTPLFVSWLGASLLGSLRE 276
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 30.3 bits (65), Expect = 2.7
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 186 IGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETA-KAIKEKYSYICPDIAKEFAK 244
IG + + + + I++ LR +GI + +ET + + S++ P KE A
Sbjct: 532 IGMFTNRLTLMMQEVEGLIRTALRNEHIGIEQRRQIETTERDFRPDSSFLDPPADKEHAG 591
Query: 245 YDSDPGKWMKKYTGINAITKNPFTV-----DVGYERF--LGPEIFFHPEFSNADFTVPLN 297
Y + M +G + T+ DV E F L I FHPE V LN
Sbjct: 592 YQNWVCNQMNLVSGTSFRETGTRTIINEALDVLKECFCTLSYNINFHPE-------VALN 644
Query: 298 EMVDEVIQSCP 308
+ DE+ P
Sbjct: 645 YLKDEMEYRTP 655
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 30.3 bits (65), Expect = 2.7
Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 186 IGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETA-KAIKEKYSYICPDIAKEFAK 244
IG + + + + I++ LR +GI + +ET + + S++ P KE A
Sbjct: 532 IGMFTNRLTLMMQEVEGLIRTALRNEHIGIEQRRQIETTERDFRPDSSFLDPPADKEHAG 591
Query: 245 YDSDPGKWMKKYTGINAITKNPFTV-----DVGYERF--LGPEIFFHPEFSNADFTVPLN 297
Y + M +G + T+ DV E F L I FHPE V LN
Sbjct: 592 YQNWVCNQMNLVSGTSFRETGTRTIINEALDVLKECFCTLSYNINFHPE-------VALN 644
Query: 298 EMVDEVIQSCP 308
+ DE+ P
Sbjct: 645 YLKDEMEYRTP 655
>AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical
protein Y40D12A.1a protein.
Length = 635
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 225 KAIKEKYSYICPDIAKEFAKYDS-DPGKWMKKYTGINAITKN-PFTVDVGYERFLGPEIF 282
K+ + Y C ++ F S WM+ Y G N I +N P + + R++
Sbjct: 361 KSFTAESRYFCRELQSMFPSGSSRSSSPWMRLY-GHNLIRRNNPEDLKISINRYILTADI 419
Query: 283 FHPEFSNADFTVPLNEMVD--EVIQSCPIDVR 312
F P++ D + ++D E++ + I +R
Sbjct: 420 FDPDYQKLDVEQIVARIMDQEEILTTSDIQLR 451
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 29.1 bits (62), Expect = 6.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 210 EREVGIPPEQSLETAKAIKEKYSYICPDIA---KEFAKYDSDPGKWMKKYT 257
E+ +GIPP+ E K E Y ++ I KE K ++D + KYT
Sbjct: 326 EKVLGIPPKVQKEGKKGKPENYDHLKDAIRSRFKEILKENNDKKSYYMKYT 376
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,659,937
Number of Sequences: 27539
Number of extensions: 448872
Number of successful extensions: 996
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 894
Number of HSP's gapped (non-prelim): 41
length of query: 418
length of database: 12,573,161
effective HSP length: 83
effective length of query: 335
effective length of database: 10,287,424
effective search space: 3446287040
effective search space used: 3446287040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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