Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001921-TA|BGIBMGA001921-PA|IPR004000|Actin/actin-like
(418 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 495 e-141
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 249 6e-67
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 200 4e-52
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 189 7e-49
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 116 5e-27
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 83 5e-17
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 79 9e-16
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 71 4e-13
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 64 3e-11
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 29 0.92
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 29 1.2
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 28 2.1
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 28 2.8
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 27 3.7
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 27 3.7
SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase |Schizo... 27 6.5
SPAC1805.16c |||purine nucleoside phosphorylase |Schizosaccharom... 27 6.5
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 495 bits (1222), Expect = e-141
Identities = 243/423 (57%), Positives = 310/423 (73%), Gaps = 23/423 (5%)
Query: 9 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKET-AKVGDQSTRRMT-------------KA 54
++D GTGY+KLG+AGN P ++ P+ IA + A G + + + +A
Sbjct: 9 IMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRA 68
Query: 55 VEDLDFFIGDEAFE--ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLM 112
EDLDFFIG++A + + GYS+ YP+RHG +E+WD MER+ +Q +FKYLR EPEDH+FL+
Sbjct: 69 TEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLL 128
Query: 113 TEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGD 172
TEPPLN PENRE AEIMFESFN GLYIAVQAVLALAASW S +R+ TG VVDSGD
Sbjct: 129 TEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGD 188
Query: 173 GVTHIVPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYS 232
GVTHI+PVAEGYVIGS IK +P+AGR++T F+QSLLR+R P+ SL+TA+ IKE+
Sbjct: 189 GVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRN---EPDSSLKTAERIKEECC 245
Query: 233 YICPDIAKEFAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADF 292
Y+CPDI KEF+++D +P +++ KY +IT + T+DVG+ERFL PEIFF+PE +++DF
Sbjct: 246 YVCPDIVKEFSRFDREPDRYL-KYAS-ESITGHSTTIDVGFERFLAPEIFFNPEIASSDF 303
Query: 293 TVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTM 352
PL E+VD V+QS PIDVR+GLY NIVLSGGST+F++FG RLQRD+KR VD R+ S M
Sbjct: 304 LTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEM 363
Query: 353 LSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSICRHNP 412
LS + +DV V+SH QR AVWFGGS+LA TPEF CHTK Y EYG SI R
Sbjct: 364 LSGAK--SGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQ 421
Query: 413 VFG 415
+FG
Sbjct: 422 IFG 424
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 249 bits (609), Expect = 6e-67
Identities = 145/408 (35%), Positives = 215/408 (52%), Gaps = 40/408 (9%)
Query: 1 MGDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDF 60
M + + A VID G+G K GFAG+ P+ + PS VG + + D
Sbjct: 1 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHHGIMVGMGQKDS 52
Query: 61 FIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNT 119
++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 53 YVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNP 112
Query: 120 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVP 179
NRE + +I+FE+FN P Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP
Sbjct: 113 KSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVP 164
Query: 180 VAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIA 239
+ EGY + I + +AGR++T ++ +L ER E + IKEK Y+ D
Sbjct: 165 IYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFE 224
Query: 240 KEFAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEM 299
+E + + K Y + + +G ERF PE F P + ++E
Sbjct: 225 QEL-QTAAQSSSLEKSYE-----LPDGQVITIGNERFRAPEALFQPSALGLE-NAGIHEA 277
Query: 300 VDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRIT 359
I C +D+R+ LYGN+V+SGG+TM+ R+Q++I+ +
Sbjct: 278 TYNSIMKCDVDIRKDLYGNVVMSGGTTMYPGIADRMQKEIQ----------------ALA 321
Query: 360 PKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 407
P + V++V+ ++Y+VW GGS+LAS F Q+ +KQ Y E GP I
Sbjct: 322 PSSMKVKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGI 369
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 200 bits (487), Expect = 4e-52
Identities = 130/398 (32%), Positives = 208/398 (52%), Gaps = 28/398 (7%)
Query: 9 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 68
V+D GTG+ K+G+A + P+F PS + + + ++ T V+ D +GDEA
Sbjct: 7 VLDNGTGFVKVGYAKDNFPRFQFPSIVG-RPILRAEEK-----TGNVQIKDVMVGDEAEA 60
Query: 69 ATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLA 127
VKYP+ +GI+ D++ M + + F+ L+ +P L+TEPP+N NRE +
Sbjct: 61 VRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMC 120
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIG 187
E MFE + G+Y+A+QAVL+L A S +G+VVDSGDGVTHIVPV E V+
Sbjct: 121 ETMFERYGFGGVYVAIQAVLSLYAQGLS--------SGVVVDSGDGVTHIVPVYESVVLN 172
Query: 188 SCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKEFAKYDS 247
+ + +AGR+ T ++ SLL + ET + +KEK Y+ D+ + K
Sbjct: 173 HLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDH-KLSE 231
Query: 248 DPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEMVDEVIQSC 307
+ M+ YT + + VG ER+ PE F P ++ L+E + + IQ+
Sbjct: 232 ETTVLMRNYT-----LPDGRVIKVGSERYECPECLFQPHLVGSE-QPGLSEFIFDTIQAA 285
Query: 308 PIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPKPIDVQV 367
+D+R+ LY IVLSGGS+M+ RL+++IK +L +L V++
Sbjct: 286 DVDIRKYLYRAIVLSGGSSMYAGLPSRLEKEIK-----QLWFERVLHGDPARLPNFKVKI 340
Query: 368 VSHNMQRYAVWFGGSMLAS-TPEFYQVCHTKQAYMEYG 404
+R+AV+ GG++LA + + +K + EYG
Sbjct: 341 EDAPRRRHAVFIGGAVLADIMAQNDHMWVSKAEWEEYG 378
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 189 bits (460), Expect = 7e-49
Identities = 130/401 (32%), Positives = 204/401 (50%), Gaps = 44/401 (10%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
D+ P C ID G+G+ K GFAG+ P+ + P+ + + +V S ++ D F+
Sbjct: 8 DNQPIC-IDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQK--------DMFV 58
Query: 63 GDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVF--KYLRAEPEDHHFLMTEPPLNT 119
G EA G ++ P+ GI+++W ME I ++ + L PE+H L+TEPPL
Sbjct: 59 GSEAQNLRGLLKIQRPIERGIIQNWSDMEE-IWSYIYSDQQLNTLPEEHPLLLTEPPLAN 117
Query: 120 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVP 179
N+E +AE +E+ NVP L ++Q VLAL AS +RT TGIV++ GDG+TH VP
Sbjct: 118 IRNKEKIAEYFYETLNVPALSFSLQPVLALYAS--ART------TGIVLECGDGLTHSVP 169
Query: 180 VAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIA 239
+ +G+ I S I+ I GR++T ++Q LR+ + E + IKEK Y+ D
Sbjct: 170 IYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFR 229
Query: 240 KEFAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVPLNEM 299
E + K + N T+ +G E F PE+ F+PE ++ + ++
Sbjct: 230 SEIESWTEH-----KPQIHTYQLPDNQ-TITLGTECFSAPEVLFNPEMMGSEASGLHIQL 283
Query: 300 VDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRIT 359
++ S ID+R LY NIVLSGGST+ R FG R +++ I+
Sbjct: 284 FKSILLS-DIDLRSTLYSNIVLSGGSTLLRGFGERFISELR----------------AIS 326
Query: 360 PKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAY 400
K V++ + + + W GGS+LAS F ++ T + Y
Sbjct: 327 GKKNQVKIYASPERMHNAWLGGSILASLSTFRRLLITSEEY 367
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 116 bits (280), Expect = 5e-27
Identities = 117/444 (26%), Positives = 192/444 (43%), Gaps = 75/444 (16%)
Query: 3 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 62
+ +P+ VID G+ +T+ G+AG + P I+PS ++ T R V++L
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDV------TGRNKYVVDELQIHA 61
Query: 63 GDEAFEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPEN 122
G VK +GI++DW+ E+ + + L+ P ++ ++TEP N
Sbjct: 62 -----PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSV 116
Query: 123 REYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAE 182
R+ + E FE +VP Y+ QAV A+ KS T ++VD G + PV +
Sbjct: 117 RQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKS--------TALIVDIGSDNASVTPVVD 168
Query: 183 GYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPP-----------EQS--LETAKAIKE 229
G +I I +AG + + I+ L + PP +QS + A
Sbjct: 169 GLIIRKGIFKQSLAGDFLNANIEQLFNTMNIEFPPHYRIARKSVAIQQSGNMANGSADAV 228
Query: 230 KYSYICPDIAKEFAKYDSDPGK-----WMKKYTGI--------NAITKN--PFTVDVGYE 274
K + + P I + Y+ + W + + A ++N PF G
Sbjct: 229 KPAVLYPPIQDLTSSYEIFQKRRVIEEWKESVLDVLDTPFDEAKASSRNPKPFEFPDGVT 288
Query: 275 RFLGPEIF------FHPEFS---NADFTVP-----LNEMVDEVIQSCPIDVRRGLYGNIV 320
G E F F+P FS +A+ T P L+E+V + I +C ++R L NIV
Sbjct: 289 HKFGQERFRISEILFNPSFSASRSAETTPPQGSVGLHELVYQSILACDSELRSPLLNNIV 348
Query: 321 LSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFG 380
++GG+++ RLQ +++R + + RI + + N AVWFG
Sbjct: 349 VTGGTSLIPGLSERLQAEVQR----------LATGSRINVHTAETASATSN----AVWFG 394
Query: 381 GSMLASTPEFYQVCHTKQAYMEYG 404
GS+LAS F + +KQ Y E G
Sbjct: 395 GSILASLDNFQHLWVSKQEYDEVG 418
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 83.4 bits (197), Expect = 5e-17
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 2 GDHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFF 61
GD + A VID G+ +T++GF+G P+ ++PS G+ S R
Sbjct: 8 GDEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYC--------GEFSDGRR---------L 50
Query: 62 IGDEAFEAT--GYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNT 119
G+E + G +K +R+G VE+WD+ + + L+ P +H L+TEP N
Sbjct: 51 FGEEYIYKSNPGMEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNP 110
Query: 120 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVP 179
PENR E MFES P Y+A Q A AS K T +VD G + +
Sbjct: 111 PENRVKTLETMFESLRCPATYLAKQETCAAFASGKG--------TACLVDIGAERSSVSA 162
Query: 180 VAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIK 228
+ +G+V+ + +G I + LR++ + P+ +++ ++
Sbjct: 163 IYDGFVLQKGYQVQHFSGNAINDILAQTLRDKNFEVMPKYLVKSKNPVE 211
Score = 54.4 bits (125), Expect = 3e-08
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 16/108 (14%)
Query: 298 EMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVD-ARLKLSTMLSEG 356
++ I C +D+R L N+++ GG+++ + F RLQ ++ + +RLK+ + G
Sbjct: 329 QLFQNCISECDVDIRASLLNNVIVCGGTSLMQGFSLRLQNELSKLYPGSRLKIH---ASG 385
Query: 357 RITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYG 404
+ + YA W GGS+L+S F+Q+ ++Q Y E+G
Sbjct: 386 HVVERS------------YASWLGGSILSSLGTFHQLWISRQEYEEHG 421
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 79.4 bits (187), Expect = 9e-16
Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 17/235 (7%)
Query: 9 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFE 68
VID G+ + G+ G K+P+ + + ++ K+ +R T D +G +
Sbjct: 28 VIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRKL----SRTSTLVGNDTLIEVGSRSI- 82
Query: 69 ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAE 128
+ P ++ +WDLME+ ++ K L + +H MTEP N R + E
Sbjct: 83 -----ARSPFERNVISNWDLMEQVLDYTFLK-LGIDRMEHPICMTEPLANPTYVRSTMTE 136
Query: 129 IMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGS 188
++FE +N P + + + + + K +S GIV++ G+ +H++PV G I S
Sbjct: 137 LLFELYNAPSVAYGIDGLFSFYHNTKPSSS------GIVLNLGNAASHVIPVLNGERILS 190
Query: 189 CIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKEFA 243
K I G +S++ L + + P + A+ + + ++ D + A
Sbjct: 191 EAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDYTHDIA 245
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 70.5 bits (165), Expect = 4e-13
Identities = 83/360 (23%), Positives = 147/360 (40%), Gaps = 42/360 (11%)
Query: 9 VIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKA-VEDLDFFIGDEAF 67
V+D G + K GFAG K + IP+ + +K G++ A D A
Sbjct: 9 VLDNGAYHIKAGFAGGKVVE--IPNCLT---RSKDGNRLFLGNELANCNDFTTLQFRRAH 63
Query: 68 EATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLA 127
E GY V + + WDL+ R + + D+ L+T+P P
Sbjct: 64 EK-GYLVHWSTETAV---WDLVMRNVG-----VMEPSMADYSLLLTQPVFTMPSIEHNTI 114
Query: 128 EIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTG------IVVDSGDGVTHIVPVA 181
+++FE F A L + E +TG +V+DSG THI+PV
Sbjct: 115 QLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVI 174
Query: 182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYSYICPDIAKE 241
+ V +K + + G+ +T++++ ++ R+ + E + IKE Y+ + ++
Sbjct: 175 DFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNMMEETYI--VNEIKESVCYVSQNFKED 232
Query: 242 ---------------FAKYDSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHP- 285
+A D GK IN + +++ ERF+ PE+ F P
Sbjct: 233 MEICHEKPRSKLEICYALPDYSTGKHGYIVRDINQKIEQQ-VLNLSNERFMIPELLFSPS 291
Query: 286 EFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDA 345
+ + +P E V + + P +++ L N+V GG+ F F +RL +++ A
Sbjct: 292 DIEIREAGIP--EAVMQSVTHFPENIQAMLLENVVTIGGNCKFPGFHKRLSSELRSLAPA 349
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 64.1 bits (149), Expect = 3e-11
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 77 PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHF----LMTEPPLNTPENREYLAEIMFE 132
P++ G V DW+ ++ + + ++ L +P D F + P + +RE + FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 133 SFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKH 192
VPG IA + ++ L A G+V+D G T I P+ +G +I + +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIG--------ILHGLVIDIGYEKTDITPILDGQIIFTATQQ 223
Query: 193 IPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKYS--YICPDIAKEFAKYDSDPG 250
+P+ GR +T +Q+LLRE + + + I E ++ C +IA + + + D
Sbjct: 224 LPLGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITELFAEQVKCSEIA-QVVRDEQDTA 282
Query: 251 K-WMKKYTGINAITKNPFTVDVG 272
K +K T N + + D+G
Sbjct: 283 KDPVKALTSTNNVEEEDPAEDIG 305
>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 29.5 bits (63), Expect = 0.92
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 246 DSDPGKWMKKYTGINAITKNPFTVDVGYERFLGPEIFFHPEFSNADFTVP 295
+ + G W + I + K + D G+E+++G + E ++ DF P
Sbjct: 380 NGNQGNWPNYPSSIRPLAKVQYEPDEGHEKWVGQVTYHMDEITDVDFEQP 429
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/88 (26%), Positives = 35/88 (39%)
Query: 48 TRRMTKAVEDLDFFIGDEAFEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPED 107
T K +E LD E + + VK + + L RY VF + + E E
Sbjct: 326 TENFKKVLEVLDHSTRQENYSKSSKKVKKSSSLERIINMVLSNRYDPIIVFCFSKKECEI 385
Query: 108 HHFLMTEPPLNTPENREYLAEIMFESFN 135
+ + LN EN+E + EI + N
Sbjct: 386 NAHQFGKLDLNDTENKELVTEIFDSAIN 413
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 285 PEFSNADFTVPLNEMVDE-VIQSCPIDVR----RGLYGNIVLSGGSTMFRDFGRRLQRDI 339
PE N PL++ +++ + +C ++ + LY +I++ GG+ F F L+ I
Sbjct: 494 PEIKNEKLIYPLDDAINQSIFSACDGNLSDEKAKNLYSSILIVGGAGQFPGFAHLLEERI 553
Query: 340 --KRA 342
KRA
Sbjct: 554 HSKRA 558
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/88 (20%), Positives = 35/88 (39%)
Query: 24 NKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGYSVKYPVRHGIV 83
N +P I + E+ + + ++ K +E F+G AF+ G + +
Sbjct: 149 NHQPAVSIEESKEAVESTSQSSEISFKLIKVIEGHHTFVGGLAFDPMGQFLASQSFDHTL 208
Query: 84 EDWDLMERYIEQCVFKYLRAEPEDHHFL 111
+ W L +E+ + K P + FL
Sbjct: 209 KVWKLSTFGVEKSIAKPFEQMPTGNRFL 236
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 291 DFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLS 322
DF VPL++ + I CP++V +G + + + S
Sbjct: 396 DFPVPLDDSYMDFIFPCPLNVEKGSFEDTLKS 427
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 3.7
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 109 HFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVV 168
+F + L+ P R+YL ++ I+V +L L WKS TSA +G V+
Sbjct: 109 YFTPAQAFLSQPIIRQYLTLLLICLVETTVYQISVVLLLCLTMGWKSWTSA----SGAVI 164
Query: 169 DSGDGVTHIVPV 180
S T ++PV
Sbjct: 165 LSSS--TRMLPV 174
>SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 26.6 bits (56), Expect = 6.5
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 7/44 (15%)
Query: 195 IAGRNITSFIQSLLRE--REVGIPPEQSLETAKAIKEKYSYICP 236
+AG+ I+S +QS+L E R + I P TA I+E S ICP
Sbjct: 112 LAGKTISS-LQSMLDESTRVIRIMPN----TASRIRESMSVICP 150
>SPAC1805.16c |||purine nucleoside phosphorylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 26.6 bits (56), Expect = 6.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 102 RAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAAS 152
+A+ + HH TEP + E REY+ E + E + P + I + L AS
Sbjct: 9 QAKQQPHH---TEPYIKALEAREYIIEQVPEELSKPKVAIICGSGLGTLAS 56
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,965,687
Number of Sequences: 5004
Number of extensions: 82264
Number of successful extensions: 240
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 190
Number of HSP's gapped (non-prelim): 27
length of query: 418
length of database: 2,362,478
effective HSP length: 75
effective length of query: 343
effective length of database: 1,987,178
effective search space: 681602054
effective search space used: 681602054
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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