GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001920-TA|BGIBMGA001920-PA|IPR007262|Vacuolar protein
sorting 55
         (81 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    21   5.3  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    21   7.1  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    21   7.1  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    21   7.1  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    21   7.1  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    20   9.3  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 20  TAVFITMGFLVSSFALPIVLARAGVIFWG 48
           T   +T  F+V    L     R  ++ WG
Sbjct: 305 TIALLTTQFIVPLVVLIFTYTRIAIVVWG 333


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 19  ETAVFITMGFLVSSFALPIVLARAGVIFW--GACYLTLAGNV 58
           E  +FI + F+ +S   P++  R G   +      +TL  NV
Sbjct: 523 ELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTLVANV 564


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 19  ETAVFITMGFLVSSFALPIVLARAGVIFW--GACYLTLAGNV 58
           E  +FI + F+ +S   P++  R G   +      +TL  NV
Sbjct: 523 ELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTLVANV 564


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 19  ETAVFITMGFLVSSFALPIVLARAGVIFW--GACYLTLAGNV 58
           E  +FI + F+ +S   P++  R G   +      +TL  NV
Sbjct: 501 ELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTLVANV 542


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 11  GGSNSACME--TAVFITMGFLVSSFALPIVLARAGVIFWGA 49
           G SN +  E    VF+ + + +   ++    AR G+  WG+
Sbjct: 235 GPSNHSRQEYYNIVFMLLTYFLPIGSMTYTYARVGLELWGS 275


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 6   HTDGAGGSNSACME 19
           HTDG   SNS  M+
Sbjct: 422 HTDGIMASNSLLMQ 435


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.332    0.142    0.457 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,649
Number of Sequences: 2123
Number of extensions: 2448
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 81
length of database: 516,269
effective HSP length: 53
effective length of query: 28
effective length of database: 403,750
effective search space: 11305000
effective search space used: 11305000
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (22.0 bits)
S2: 40 (20.2 bits)