BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001920-TA|BGIBMGA001920-PA|IPR007262|Vacuolar protein
sorting 55
(81 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF063605-1|AAC98697.1| 131|Homo sapiens brain my047 protein pro... 90 9e-19
CR541760-1|CAG46560.1| 131|Homo sapiens LEPROTL1 protein. 90 1e-18
CR541735-1|CAG46535.1| 131|Homo sapiens LEPROTL1 protein. 90 1e-18
BC000642-1|AAH00642.1| 131|Homo sapiens leptin receptor overlap... 90 1e-18
AY358674-1|AAQ89037.1| 131|Homo sapiens MY047 protein. 90 1e-18
AY277595-1|AAQ18034.1| 131|Homo sapiens transformation-related ... 90 1e-18
Y12670-1|CAA73211.1| 131|Homo sapiens leptin receptor gene-rela... 88 5e-18
CR541737-1|CAG46537.1| 131|Homo sapiens LEPR protein. 88 5e-18
CR541647-1|CAG46448.1| 131|Homo sapiens LEPR protein. 88 5e-18
BC056250-1|AAH56250.1| 131|Homo sapiens leptin receptor overlap... 88 5e-18
BC011027-1|AAH11027.2| 126|Homo sapiens LEPROT protein protein. 88 5e-18
BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein. 28 4.1
BC093789-1|AAH93789.1| 1165|Homo sapiens transient receptor pote... 28 4.1
BC093787-1|AAH93787.1| 1165|Homo sapiens transient receptor pote... 28 4.1
BC036203-1|AAH36203.1| 237|Homo sapiens testis enhanced gene tr... 28 4.1
BC000916-1|AAH00916.1| 237|Homo sapiens testis enhanced gene tr... 28 4.1
AY736129-1|AAU29521.1| 237|Homo sapiens BAX inhibitor 1 protein. 28 4.1
AJ270996-1|CAB66342.1| 1159|Homo sapiens LTRPC5 protein protein. 28 4.1
AF177473-1|AAF26288.1| 1165|Homo sapiens MTR1 protein. 28 4.1
AF033095-1|AAB87479.1| 237|Homo sapiens testis enhanced gene tr... 28 4.1
AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein. 28 4.1
>AF063605-1|AAC98697.1| 131|Homo sapiens brain my047 protein
protein.
Length = 131
Score = 90.2 bits (214), Expect = 9e-19
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IARR D ++AC E A+F+T G +VS+F LPIV ARA +I WGAC L L GN +++
Sbjct: 51 IARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIF 110
Query: 62 LTILGFFTIF-DMDDSDYAMW 81
TILGFF +F DD + W
Sbjct: 111 ATILGFFLVFGSKDDFSWQQW 131
>CR541760-1|CAG46560.1| 131|Homo sapiens LEPROTL1 protein.
Length = 131
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IARR D ++AC E A+F+T G +VS+F LPIV ARA +I WGAC L L GN +++
Sbjct: 51 IARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIF 110
Query: 62 LTILGFFTIF-DMDDSDYAMW 81
TILGFF +F DD + W
Sbjct: 111 ATILGFFLVFGSNDDFSWQQW 131
>CR541735-1|CAG46535.1| 131|Homo sapiens LEPROTL1 protein.
Length = 131
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IARR D ++AC E A+F+T G +VS+F LPIV ARA +I WGAC L L GN +++
Sbjct: 51 IARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIF 110
Query: 62 LTILGFFTIF-DMDDSDYAMW 81
TILGFF +F DD + W
Sbjct: 111 ATILGFFLVFGSNDDFSWQQW 131
>BC000642-1|AAH00642.1| 131|Homo sapiens leptin receptor
overlapping transcript-like 1 protein.
Length = 131
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IARR D ++AC E A+F+T G +VS+F LPIV ARA +I WGAC L L GN +++
Sbjct: 51 IARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIF 110
Query: 62 LTILGFFTIF-DMDDSDYAMW 81
TILGFF +F DD + W
Sbjct: 111 ATILGFFLVFGSNDDFSWQQW 131
>AY358674-1|AAQ89037.1| 131|Homo sapiens MY047 protein.
Length = 131
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IARR D ++AC E A+F+T G +VS+F LPIV ARA +I WGAC L L GN +++
Sbjct: 51 IARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIF 110
Query: 62 LTILGFFTIF-DMDDSDYAMW 81
TILGFF +F DD + W
Sbjct: 111 ATILGFFLVFGSNDDFSWQQW 131
>AY277595-1|AAQ18034.1| 131|Homo sapiens transformation-related
protein 12 protein.
Length = 131
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IARR D ++AC E A+F+T G +VS+F LPIV ARA +I WGAC L L GN +++
Sbjct: 51 IARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIF 110
Query: 62 LTILGFFTIF-DMDDSDYAMW 81
TILGFF +F DD + W
Sbjct: 111 ATILGFFLVFGSNDDFSWQQW 131
>Y12670-1|CAA73211.1| 131|Homo sapiens leptin receptor gene-related
protein protein.
Length = 131
Score = 87.8 bits (208), Expect = 5e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IA+R T + ++SAC E A F T G +VS+F P++LAR VI WGAC L LAGN +++
Sbjct: 51 IAKRVTYDSDATSSACRELAYFFTTGIVVSAFGFPVILARVAVIKWGACGLVLAGNAVIF 110
Query: 62 LTILGFFTIFDM-DDSDYAMW 81
LTI GFF IF DD + W
Sbjct: 111 LTIQGFFLIFGRGDDFSWEQW 131
>CR541737-1|CAG46537.1| 131|Homo sapiens LEPR protein.
Length = 131
Score = 87.8 bits (208), Expect = 5e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IA+R T + ++SAC E A F T G +VS+F P++LAR VI WGAC L LAGN +++
Sbjct: 51 IAKRVTYDSDATSSACRELAYFFTTGIVVSAFGFPVILARVAVIKWGACGLVLAGNAVIF 110
Query: 62 LTILGFFTIFDM-DDSDYAMW 81
LTI GFF IF DD + W
Sbjct: 111 LTIQGFFLIFGRGDDFSWEQW 131
>CR541647-1|CAG46448.1| 131|Homo sapiens LEPR protein.
Length = 131
Score = 87.8 bits (208), Expect = 5e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IA+R T + ++SAC E A F T G +VS+F P++LAR VI WGAC L LAGN +++
Sbjct: 51 IAKRVTYDSDATSSACRELAYFFTTGIVVSAFGFPVILARVAVIKWGACGLVLAGNAVIF 110
Query: 62 LTILGFFTIFDM-DDSDYAMW 81
LTI GFF IF DD + W
Sbjct: 111 LTIQGFFLIFGRGDDFSWEQW 131
>BC056250-1|AAH56250.1| 131|Homo sapiens leptin receptor
overlapping transcript protein.
Length = 131
Score = 87.8 bits (208), Expect = 5e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IA+R T + ++SAC E A F T G +VS+F P++LAR VI WGAC L LAGN +++
Sbjct: 51 IAKRVTYDSDATSSACRELAYFFTTGIVVSAFGFPVILARVAVIKWGACGLVLAGNAVIF 110
Query: 62 LTILGFFTIFDM-DDSDYAMW 81
LTI GFF IF DD + W
Sbjct: 111 LTIQGFFLIFGRGDDFSWEQW 131
>BC011027-1|AAH11027.2| 126|Homo sapiens LEPROT protein protein.
Length = 126
Score = 87.8 bits (208), Expect = 5e-18
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 2 IARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVY 61
IA+R T + ++SAC E A F T G +VS+F P++LAR VI WGAC L LAGN +++
Sbjct: 46 IAKRVTYDSDATSSACRELAYFFTTGIVVSAFGFPVILARVAVIKWGACGLVLAGNAVIF 105
Query: 62 LTILGFFTIFDM-DDSDYAMW 81
LTI GFF IF DD + W
Sbjct: 106 LTIQGFFLIFGRGDDFSWEQW 126
>BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein.
Length = 1621
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 21 AVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFDM 73
A+ MG S+F L L AG IF A +L L ++ + GF +F +
Sbjct: 253 ALMTMMGLRDSAFWLSWGLLYAGFIFIMALFLALVIRSTQFIILSGFMVVFSL 305
>BC093789-1|AAH93789.1| 1165|Homo sapiens transient receptor
potential cation channel, subfamily M, member 5 protein.
Length = 1165
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 46 FWGACYLTLAGNVIVYLTILGFFT 69
FWGA GNV++Y L FT
Sbjct: 727 FWGAPVTVFLGNVVMYFAFLFLFT 750
>BC093787-1|AAH93787.1| 1165|Homo sapiens transient receptor
potential cation channel, subfamily M, member 5 protein.
Length = 1165
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 46 FWGACYLTLAGNVIVYLTILGFFT 69
FWGA GNV++Y L FT
Sbjct: 727 FWGAPVTVFLGNVVMYFAFLFLFT 750
>BC036203-1|AAH36203.1| 237|Homo sapiens testis enhanced gene
transcript (BAX inhibitor 1) protein.
Length = 237
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFD 72
G L+S+ +L ++L+ G +F+G+ +L A N+ V L ++ F +FD
Sbjct: 145 GILMSALSL-LLLSSLGNVFFGSIWLFQA-NLYVGLVVMCGFVLFD 188
>BC000916-1|AAH00916.1| 237|Homo sapiens testis enhanced gene
transcript (BAX inhibitor 1) protein.
Length = 237
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFD 72
G L+S+ +L ++L+ G +F+G+ +L A N+ V L ++ F +FD
Sbjct: 145 GILMSALSL-LLLSSLGNVFFGSIWLFQA-NLYVGLVVMCGFVLFD 188
>AY736129-1|AAU29521.1| 237|Homo sapiens BAX inhibitor 1 protein.
Length = 237
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFD 72
G L+S+ +L ++L+ G +F+G+ +L A N+ V L ++ F +FD
Sbjct: 145 GILMSALSL-LLLSSLGNVFFGSIWLFQA-NLYVGLVVMCGFVLFD 188
>AJ270996-1|CAB66342.1| 1159|Homo sapiens LTRPC5 protein protein.
Length = 1159
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 46 FWGACYLTLAGNVIVYLTILGFFT 69
FWGA GNV++Y L FT
Sbjct: 721 FWGAPVTVFLGNVVMYFAFLFLFT 744
>AF177473-1|AAF26288.1| 1165|Homo sapiens MTR1 protein.
Length = 1165
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 46 FWGACYLTLAGNVIVYLTILGFFT 69
FWGA GNV++Y L FT
Sbjct: 727 FWGAPVTVFLGNVVMYFAFLFLFT 750
>AF033095-1|AAB87479.1| 237|Homo sapiens testis enhanced gene
transcript protein protein.
Length = 237
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFD 72
G L+S+ +L ++L+ G +F+G+ +L A N+ V L ++ F +FD
Sbjct: 145 GILMSALSL-LLLSSLGNVFFGSIWLFQA-NLYVGLVVMCGFVLFD 188
>AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein.
Length = 1591
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 21 AVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFDM 73
A+ MG S+F L L AG IF A +L L ++ + GF +F +
Sbjct: 263 ALMTMMGLRDSAFWLSWGLLYAGFIFIMALFLALVIRSTQFIILSGFMVVFSL 315
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.332 0.142 0.457
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,693,662
Number of Sequences: 224733
Number of extensions: 362357
Number of successful extensions: 793
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 776
Number of HSP's gapped (non-prelim): 21
length of query: 81
length of database: 73,234,838
effective HSP length: 59
effective length of query: 22
effective length of database: 59,975,591
effective search space: 1319463002
effective search space used: 1319463002
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (22.0 bits)
S2: 57 (27.1 bits)
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