Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001920-TA|BGIBMGA001920-PA|IPR007262|Vacuolar protein
sorting 55
(81 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 0.63
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 1.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 1.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 1.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 1.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 1.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 1.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 1.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 1.5
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 20 3.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 20 3.4
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 20 3.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 19 7.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 19 7.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 19 7.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 19 7.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 19 7.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 19 7.8
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 19 7.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 7.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 7.8
AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein. 19 7.8
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 19 7.8
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 19 7.8
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.6 bits (46), Expect = 0.63
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 31 SSFALPIVLARAGVIFWGACYLTLAGNVIVYLTI 64
++F+L VL G +F +L++AGN++V + I
Sbjct: 18 NTFSLLSVLL-VGFLFLILIFLSVAGNILVCVAI 50
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 1.1
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 24 ITMGFLVSSF--ALP-IVLARAGVIFWGACYLTLAGNVIVYLTI 64
+TM L+SS ALP I ++ ++ G C++ + +++ Y T+
Sbjct: 261 LTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 304
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 1.1
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 24 ITMGFLVSSF--ALP-IVLARAGVIFWGACYLTLAGNVIVYLTI 64
+TM L+SS ALP I ++ ++ G C++ + +++ Y T+
Sbjct: 261 LTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 304
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 1.1
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 24 ITMGFLVSSF--ALP-IVLARAGVIFWGACYLTLAGNVIVYLTI 64
+TM L+SS ALP I ++ ++ G C++ + +++ Y T+
Sbjct: 200 LTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 243
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 1.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFDMDDSD 77
G L S +L + + +IF C LTLA + +T++ IF+ SD
Sbjct: 14 GRLSSVLSLSLTSLASSLIFTILCILTLA---LTLVTLVRAEDIFEDGKSD 61
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 1.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFDMDDSD 77
G L S +L + + +IF C LTLA + +T++ IF+ SD
Sbjct: 14 GRLSSVLSLSLTSLASSLIFTILCILTLA---LTLVTLVRAEDIFEDGKSD 61
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 1.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFDMDDSD 77
G L S +L + + +IF C LTLA + +T++ IF+ SD
Sbjct: 14 GRLSSVLSLSLTSLASSLIFTILCILTLA---LTLVTLVRAEDIFEDGKSD 61
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 1.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFDMDDSD 77
G L S +L + + +IF C LTLA + +T++ IF+ SD
Sbjct: 14 GRLSSVLSLSLTSLASSLIFTILCILTLA---LTLVTLVRAEDIFEDGKSD 61
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 1.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 52 LTLAGNVIVYLTILGFFTIFDMDDSD 77
LTL+GN I + L F D+ + D
Sbjct: 412 LTLSGNAIASIDPLAFRNCSDLKELD 437
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 20.2 bits (40), Expect = 3.4
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 44 VIFWGACYLTLAGNVIVYLTILGFFTIFDM 73
V G C+L A I+ I F T F M
Sbjct: 297 VAITGGCFLFRAWESIIVGMIGAFITCFTM 326
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 20.2 bits (40), Expect = 3.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 52 LTLAGNVIVYLTIL 65
LTL GNV+V L ++
Sbjct: 199 LTLFGNVLVILAVV 212
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 20.2 bits (40), Expect = 3.4
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 29 LVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILG 66
LV F +L +GV G Y+ L+G V LG
Sbjct: 46 LVQGFEEQDILTSSGVTLAGNRYIYLSGTDRVIRAKLG 83
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAG 56
G++ S+F PI R + + L L+G
Sbjct: 364 GYIRSAFGTPISTGRPATVEDTSASLPLSG 393
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAG 56
G++ S+F PI R + + L L+G
Sbjct: 364 GYIRSAFGTPISTGRPATVEDTSASLPLSG 393
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAG 56
G++ S+F PI R + + L L+G
Sbjct: 364 GYIRSAFGTPISTGRPATVEDTSASLPLSG 393
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAG 56
G++ S+F PI R + + L L+G
Sbjct: 364 GYIRSAFGTPISTGRPATVEDTSASLPLSG 393
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAG 56
G++ S+F PI R + + L L+G
Sbjct: 364 GYIRSAFGTPISTGRPATVEDTSASLPLSG 393
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAG 56
G++ S+F PI R + + L L+G
Sbjct: 364 GYIRSAFGTPISTGRPATVEDTSASLPLSG 393
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 23 FITMGFLVSSFALPIVLARAGVIFWG 48
F+ SS ++ V+ R GV+F+G
Sbjct: 298 FVPFSIERSSQSVAEVMDRNGVLFFG 323
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAG 56
G++ S+F PI R + + L L+G
Sbjct: 432 GYIRSAFGTPISTGRPATVEDTSASLPLSG 461
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 27 GFLVSSFALPIVLARAGVIFWGACYLTLAG 56
G++ S+F PI R + + L L+G
Sbjct: 432 GYIRSAFGTPISTGRPATVEDTSASLPLSG 461
>AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein.
Length = 88
Score = 19.0 bits (37), Expect = 7.8
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 71 FDMDDSDYA 79
FD+DD D+A
Sbjct: 18 FDIDDPDFA 26
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 19.0 bits (37), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 18 METAVFITMGFLVSSFAL 35
MET T+G +V F L
Sbjct: 3 METKAAKTLGIIVGGFIL 20
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 19.0 bits (37), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 18 METAVFITMGFLVSSFAL 35
MET T+G +V F L
Sbjct: 451 METKAAKTLGIIVGGFIL 468
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.332 0.142 0.457
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,935
Number of Sequences: 429
Number of extensions: 714
Number of successful extensions: 25
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of query: 81
length of database: 140,377
effective HSP length: 47
effective length of query: 34
effective length of database: 120,214
effective search space: 4087276
effective search space used: 4087276
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.5 bits)
S2: 37 (19.0 bits)
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