BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001919-TA|BGIBMGA001919-PA|undefined (468 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC7D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 1.1 SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 29 1.4 SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 29 1.8 SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 28 3.2 SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 28 3.2 SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 4.2 SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 27 7.4 SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 26 9.8 SPBC1198.13c |tfg2|SPBC660.03c|transcription factor TFIIF comple... 26 9.8 >SPAC7D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 312 Score = 29.5 bits (63), Expect = 1.1 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 11/119 (9%) Query: 253 TSTVKTDLILRLIKAEIKQDFLKSLKAILCDYLPMETIPKMDNVLIHKRSPYHKLNGIII 312 T +K I +L+K ++K +FLK +K I P+ + I K Y G+ Sbjct: 7 THNIKNSAI-QLLKTKLKNEFLKGVKCI-------TKYPENAH-SIFKVQEYTGYKGVTF 57 Query: 313 VFNDKY--TLEEVRFDVTAYSRTPSQVLALIRYIYDAVPFKILITTADQKVTAKLDEFS 369 + + K+ T++ + + +PS L L+ Y + I T A L EFS Sbjct: 58 IVSTKWNLTVDSIHKLIPEIKSSPSACLLLVNQPYPVIEKITDILTKHGITNANLLEFS 116 >SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces pombe|chr 3|||Manual Length = 647 Score = 29.1 bits (62), Expect = 1.4 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 4/91 (4%) Query: 102 KVIKRISSVEKYEIDDTKCTGRIQLKVYYKDDAIPL---IFDDNLAXXXXXXXXXXXXXS 158 ++ + ++ EKY+ +D +GRIQ K + + A L + D NL + Sbjct: 512 EIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKA 571 Query: 159 PMLVVE-LQSKLSEAKYNLECNEKTYRELVN 188 +E L S + AK E +K + N Sbjct: 572 VKETIEWLDSNTTAAKDEFEAKQKELESVAN 602 >SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60|Schizosaccharomyces pombe|chr 1|||Manual Length = 582 Score = 28.7 bits (61), Expect = 1.8 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 412 KDLTVRDKIGKVIDLLACGQTDYNKFRAK-MSELGAKGVIKMLGDDDNSDNEIEV 465 +D+T ++I +V + A G T + AK M +G +GVI + SD E+EV Sbjct: 167 RDITTSEEISQVATISANGDTHIGELLAKAMERVGKEGVITVKEGRTISD-ELEV 220 >SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 223 Score = 27.9 bits (59), Expect = 3.2 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Query: 162 VVELQSKLSEAKYNLECNEKTYRELV-NLRQ-MASY 195 V ELQSKLSE K E +K EL ++RQ +A Y Sbjct: 53 VKELQSKLSELKSKYEAKDKEVAELKGSIRQSLADY 88 >SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosaccharomyces pombe|chr 2|||Manual Length = 294 Score = 27.9 bits (59), Expect = 3.2 Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Query: 382 NNLAYASSILNRTSLVLEYLDRSMI-KMNESKDLTVRDKIGKVIDLLACGQTDYNKFRAK 440 N ++ ++ L ++ +R I K E+KDL+++++ ID+L +D +K Sbjct: 146 NERLWSDPFVSSQRLRKQFRERKKIEKKQEAKDLSLKNRAALDIDILPPSSSDKDKALLL 205 Query: 441 M-SELGAKGVIKML 453 + +ELG I+ L Sbjct: 206 LDNELGKNKFIRKL 219 >SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1727 Score = 27.5 bits (58), Expect = 4.2 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 355 TTADQKVTAKLDEFSSYNDTLESPSTVNNLAYASSILNRTSLVLEYLDRSMIKM-NESKD 413 TT + T L+EF+S + L ST L+ ILN T LE + ++ K SKD Sbjct: 1435 TTQSEPSTVSLEEFNSTKEELS--STQRKLSEIMDILNTTKEELEKVRQNSNKSEGTSKD 1492 Query: 414 LTV 416 + Sbjct: 1493 TEI 1495 >SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1842 Score = 26.6 bits (56), Expect = 7.4 Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 16/127 (12%) Query: 304 YHKLNGIIIVFNDKY---TLEEVRFDVTAY-SRTPSQVLALIRYIYDAVPFKILITTADQ 359 + ++ G +IV + Y ++E ++ AY ++T ++ A RY +DA+ + L+ D Sbjct: 1605 FGQVGGQVIVIHPDYIYGVIDEATYN--AYKAKTAARYKASYRYTHDALVYNNLVRAKDS 1662 Query: 360 KVTAKLDEFSSYNDTL--ESPSTVNNLAYASSI--------LNRTSLVLEYLDRSMIKMN 409 K E + Y + L S S + +++ N T+ L+ L S+ N Sbjct: 1663 PPYTKEQEKAVYLNPLARASKSKAGTWTFPATLPAESDISKTNETTRTLQSLTTSLTNSN 1722 Query: 410 ESKDLTV 416 E+ + V Sbjct: 1723 ENVGVDV 1729 >SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces pombe|chr 1|||Manual Length = 1028 Score = 26.2 bits (55), Expect = 9.8 Identities = 9/34 (26%), Positives = 21/34 (61%) Query: 83 FYLVQTREDFFVLSRKETLKVIKRISSVEKYEID 116 +YL+ ++ +L R +L++++ +S +YE D Sbjct: 801 YYLIDENKEISILRRILSLRIVEPTTSFTRYEYD 834 >SPBC1198.13c |tfg2|SPBC660.03c|transcription factor TFIIF complex beta subunit Tfg2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 307 Score = 26.2 bits (55), Expect = 9.8 Identities = 10/29 (34%), Positives = 18/29 (62%) Query: 51 EFYQRDLICSLLLDNTSGPYSIKMLRNPE 79 E Y ++++ S+ + N GPY++K PE Sbjct: 223 EVYLKEVLDSIAILNKRGPYALKYSLKPE 251 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.135 0.376 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,063,154 Number of Sequences: 5004 Number of extensions: 85263 Number of successful extensions: 262 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 259 Number of HSP's gapped (non-prelim): 9 length of query: 468 length of database: 2,362,478 effective HSP length: 75 effective length of query: 393 effective length of database: 1,987,178 effective search space: 780960954 effective search space used: 780960954 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 55 (26.2 bits)
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