GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001919-TA|BGIBMGA001919-PA|undefined
         (468 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    26   2.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   4.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   4.4  
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           24   7.7  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           24   7.7  

>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 180 EKTYRELVNLRQMASYSIYQKNQGISDNPQPKCV 213
           E+  R ++  R      + Q+ + + DNPQPK V
Sbjct: 2   ERILRGVMRYRHTTREQMVQEFRKVRDNPQPKAV 35


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 15/55 (27%), Positives = 24/55 (43%)

Query: 227 WVKYCNKKVVIAIDTSNHYHDVLAAITSTVKTDLILRLIKAEIKQDFLKSLKAIL 281
           +V YC  ++         Y D+ AA  S     L+ +L K  I    ++ LK+ L
Sbjct: 666 FVTYCTSQIDAGAQVDAIYTDLKAAFDSLPHAILLAKLDKLGIPSPLVQWLKSYL 720


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 10  ITRLVPASIVNNVSSFVFYDNH 31
           +TR+ PA+I N++      DNH
Sbjct: 641 LTRVTPATIPNSIEFLFLNDNH 662


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 7.7
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 54  QRDLICSLLLDNTSGPYSIKMLRNPEADLFYLVQTREDFFVLSR-KETLKV-IKRISSVE 111
           Q +  C++ + N  GPY  + L  P AD    ++ +E   +  +  ET ++  +R +   
Sbjct: 300 QNEEECTVPMHNHYGPYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQAR 359

Query: 112 KYEIDDTK 119
           + EID  K
Sbjct: 360 QREIDALK 367


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 7.7
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 54  QRDLICSLLLDNTSGPYSIKMLRNPEADLFYLVQTREDFFVLSR-KETLKV-IKRISSVE 111
           Q +  C++ + N  GPY  + L  P AD    ++ +E   +  +  ET ++  +R +   
Sbjct: 300 QNEEECTVPMHNHYGPYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQAR 359

Query: 112 KYEIDDTK 119
           + EID  K
Sbjct: 360 QREIDALK 367


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,047
Number of Sequences: 2123
Number of extensions: 17141
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 5
length of query: 468
length of database: 516,269
effective HSP length: 66
effective length of query: 402
effective length of database: 376,151
effective search space: 151212702
effective search space used: 151212702
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)