Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001919-TA|BGIBMGA001919-PA|undefined
(468 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical pr... 36 0.081
Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z82269-1|CAB05205.2| 651|Caenorhabditis elegans Hypothetical pr... 30 4.0
U40411-3|AAC47066.2| 270|Caenorhabditis elegans Hypothetical pr... 30 4.0
AF040655-6|AAB95043.2| 296|Caenorhabditis elegans Serpentine re... 29 5.3
Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical p... 29 7.0
Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical p... 29 7.0
Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical pr... 29 7.0
>Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical
protein C14C10.4 protein.
Length = 1058
Score = 35.5 bits (78), Expect = 0.081
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 320 LEEVRFDVTAYSRTPSQVLALIRYIYDAVPFKILITTADQKVTAKLDEFSSYNDTLESPS 379
+E + + T + +T S+++ L+ D L T +D+++ L F S DTL
Sbjct: 88 VEYIEWRGTVFPQTVSKIIGLLERAAD------LSTLSDRQLAVLLSIFGSTCDTLSRSL 141
Query: 380 TVNNLAYASSILNRTSLVLEYLDRSMI---KMNESKDLTVRDKIGK 422
NL SIL +VL L R+ + K++ + +++GK
Sbjct: 142 RAQNLEKVESILREKGVVLGLLSRNQLIEAKVDNRSRVDAVEELGK 187
>Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical
protein C38D9.6 protein.
Length = 511
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/74 (20%), Positives = 37/74 (50%)
Query: 213 VKEMSEFKLKLKSPWVKYCNKKVVIAIDTSNHYHDVLAAITSTVKTDLILRLIKAEIKQD 272
+ + ++ + +++ +K + +A+ S HYH+ IT+ VK + L + K ++
Sbjct: 305 IMALHDWSVVMQNQTLKLKTLNLTLALGKSEHYHNCYTTITTVVKKAICLFVEKITLEGF 364
Query: 273 FLKSLKAILCDYLP 286
K + +L ++ P
Sbjct: 365 QFKEVYDVLRNFKP 378
>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
protein F43G6.1b protein.
Length = 1069
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 232 NKKVVIAIDTSNHYHDVLAAITSTVKTDLILRL-IKAEIKQDFLK-SLKAIL 281
NKKV++A T + ++L +T V + ILRL + IK D K +LKA L
Sbjct: 693 NKKVLLAAFTHSAVDNILTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKL 744
>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
protein F43G6.1a protein.
Length = 1105
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 232 NKKVVIAIDTSNHYHDVLAAITSTVKTDLILRL-IKAEIKQDFLK-SLKAIL 281
NKKV++A T + ++L +T V + ILRL + IK D K +LKA L
Sbjct: 729 NKKVLLAAFTHSAVDNILTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKL 780
>Z82269-1|CAB05205.2| 651|Caenorhabditis elegans Hypothetical
protein F52G2.3 protein.
Length = 651
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 168 KLSEAKYNLECNEKTYRELVNLRQMASYSIYQKNQGISDNPQP 210
KLSE ++ N+ YRE +N ++ + SIY + G+ QP
Sbjct: 233 KLSEQPQTVQ-NQAPYREQINQQRSVTNSIYGEFSGVGRTDQP 274
>U40411-3|AAC47066.2| 270|Caenorhabditis elegans Hypothetical
protein B0403.3 protein.
Length = 270
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 314 FNDKYTLEEVRFDVTAYSRTPSQVLALIRYIYDAVPFKILITTADQKVTAKLDEFSSYND 373
F D+Y + D+ + S+ A IYD F+I + TA K A L F S
Sbjct: 27 FGDEYRINTPACDIVCEGQWKSEFHANFHKIYDTEYFEIPLDTAIVKNRANLKMFCS--S 84
Query: 374 TLESPSTVNN 383
T++ S + N
Sbjct: 85 TIQKYSCLRN 94
>AF040655-6|AAB95043.2| 296|Caenorhabditis elegans Serpentine
receptor, class x protein112 protein.
Length = 296
Score = 29.5 bits (63), Expect = 5.3
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 319 TLEEVRFDVTAYSRTPSQVLALIRYIYDAVPFKILITTADQ-KVTAKLDEFSSYNDTLES 377
TLE+ F + S+T S L L+ Y+ P +L T ++ L F+ Y L+
Sbjct: 35 TLEKTSFHLLCVSKTLSNSLILLVYLVYTGPVHLLYTQIGSIELNILLHHFAMYGLMLQG 94
Query: 378 PST 380
P T
Sbjct: 95 PIT 97
>Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 64 DNTSGPYSIKMLRNPEADLFYLVQTREDFFVLSRK 98
+NTS P+S K+ RN ++D L + +D LS K
Sbjct: 670 NNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDK 704
>Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 64 DNTSGPYSIKMLRNPEADLFYLVQTREDFFVLSRK 98
+NTS P+S K+ RN ++D L + +D LS K
Sbjct: 747 NNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDK 781
>Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 64 DNTSGPYSIKMLRNPEADLFYLVQTREDFFVLSRK 98
+NTS P+S K+ RN ++D L + +D LS K
Sbjct: 670 NNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDK 704
>Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 64 DNTSGPYSIKMLRNPEADLFYLVQTREDFFVLSRK 98
+NTS P+S K+ RN ++D L + +D LS K
Sbjct: 747 NNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDK 781
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,826,366
Number of Sequences: 27539
Number of extensions: 439608
Number of successful extensions: 1197
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1188
Number of HSP's gapped (non-prelim): 11
length of query: 468
length of database: 12,573,161
effective HSP length: 84
effective length of query: 384
effective length of database: 10,259,885
effective search space: 3939795840
effective search space used: 3939795840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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