Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001918-TA|BGIBMGA001918-PA|IPR001096|Peptidase C13,
legumain
(264 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual 271 6e-74
SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D |Schi... 29 0.52
SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosacch... 27 2.1
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 27 2.1
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 27 2.8
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 27 3.7
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 26 4.9
SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po... 26 4.9
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 25 8.5
SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyc... 25 8.5
>SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 271 bits (665), Expect = 6e-74
Identities = 130/229 (56%), Positives = 170/229 (74%), Gaps = 1/229 (0%)
Query: 2 ACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQLL 61
ACN RN P T+F++A +++YG+++E+DY+GYEV+VE FIRLLT RVP +TP SK+LL
Sbjct: 72 ACNSRNLFPGTVFDNADRALDLYGEEIEIDYKGYEVTVEAFIRLLTERVPENTPASKRLL 131
Query: 62 TDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASS 121
T+E SNILIY+TGHGGDGF+KFQD+EE++S++LADA+EQ+ Q KRYNEI F++DTCQA+S
Sbjct: 132 TNERSNILIYMTGHGGDGFIKFQDAEELSSEDLADAIEQIHQHKRYNEILFMVDTCQANS 191
Query: 122 MYEKFYSPNILATASSLVGEDSLSHHVDSAIGVYIIDRYTYYVLEFLEN-VHPNSKRTMS 180
+Y K YSPN+LA SS VG S SHH D IGV +IDR+T+ LEFLEN V SK TM
Sbjct: 192 LYTKIYSPNVLAIGSSEVGTSSYSHHADIDIGVAVIDRFTFSNLEFLENRVDSKSKLTMQ 251
Query: 181 EFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFFGSVRPVILTTDPIN 229
+ + ST GV+ R P + ITDFFG+VR + L ++ IN
Sbjct: 252 DLINSYNPYEIHSTPGVQPINLRRSPDDILITDFFGNVRDIELHSEKIN 300
>SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1107
Score = 29.5 bits (63), Expect = 0.52
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 178 TMSEFLAVCPKSACLSTVGVRKDLFN 203
++S FL +CP++ CL TV V N
Sbjct: 222 SLSSFLKICPRNDCLQTVDVAFQFLN 247
>SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1294
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 101 MWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATASSLVGEDSLS 145
+WQ K IF + A ++ YS I+ + LVG DSL+
Sbjct: 1128 VWQSKTIEMIFRYVSD-PAEALESSLYSSLIIIGSDDLVGPDSLN 1171
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 27.5 bits (58), Expect = 2.1
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 58 KQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTC 117
K L + +GS+I ++ G+G D +++ E Q D + +R+N+ ++ +
Sbjct: 394 KNLQSLKGSSIELFAQGYGKDSSFVVKNAVEYAKQNSFDVILIDTAGRRHND-QRLMGSL 452
Query: 118 QASSMYEKFYSPNILATASSLVGEDSLS 145
+ + K I A +LVG DSL+
Sbjct: 453 EKFTKATKL--DKIFQVAEALVGTDSLA 478
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 199 KDLFNRDPSKVPITDFFGSVRPV 221
K + D K+PI ++FG V PV
Sbjct: 1089 KKFYAGDEKKIPIVEYFGGVPPV 1111
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 117 CQASSMYEKFYSPNI-LATASSLVGEDSLSHHVDSAIGVYIIDRYTYYVLEFLENV 171
C A + +FY+ + T S+ S V S + YI+ TYY+ + +N+
Sbjct: 325 CIAGFVVNEFYTTRTRIITPSAFKTLSLTSVMVTSFLHYYIVSTITYYIPVYFQNI 380
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 160 YTYYVLEFLENVHPNSKRTMSEFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFFG-SV 218
+ YY+ +FLEN+ + ++ L S C + + L P+K+ + +V
Sbjct: 324 WMYYLWQFLENLRFATPLLVTAQLTPVGISGCAAALTTGYLLKRLKPTKIMVVSMIAFTV 383
Query: 219 RPVILTTDPIN 229
+++ T PI+
Sbjct: 384 GTILIATAPIH 394
>SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 44 RLLTGRVPPDTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEE 88
RL GR+PP R + +G ++ G GF++ +D+ +
Sbjct: 5 RLFVGRIPPQATREDMMDFFKGYGQILDCKLMNGFGFVEVEDARD 49
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 167 FLENVHPNSKRTMSEFLAVCPKSACLSTVG 196
F++N++PNS + L S C ST G
Sbjct: 99 FVDNLNPNSSHFSASLLPASLSSLCDSTCG 128
>SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 25.4 bits (53), Expect = 8.5
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 171 VHPNSKRTMSEFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFFGSVRPVILTTDPINI 230
V NS R + ++ CPK ++ +++ +DP+ +PI FG + P +P ++
Sbjct: 302 VFANSSRNLENLIS-CPKMETPTSSVYVVNVYYKDPNVLPIRG-FGLLIPSCTPNNPNHV 359
Query: 231 V 231
+
Sbjct: 360 L 360
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.137 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,197,032
Number of Sequences: 5004
Number of extensions: 49568
Number of successful extensions: 109
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 103
Number of HSP's gapped (non-prelim): 10
length of query: 264
length of database: 2,362,478
effective HSP length: 71
effective length of query: 193
effective length of database: 2,007,194
effective search space: 387388442
effective search space used: 387388442
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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