GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001918-TA|BGIBMGA001918-PA|IPR001096|Peptidase C13,
legumain
         (264 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   1.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   7.2  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 35  YEVSVENFIRLLTGRVPPDTPRSKQLLTDEGSNILIYLTGHG 76
           Y+V+    ++LLT  + PD     ++L  + SN  I  +  G
Sbjct: 318 YQVTTNLVLKLLTSPLLPDIKEQVEILAVQVSNKKIKFSSFG 359


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 168 LENVHPNSKRTMSEFLAV 185
           +  V PN K+ +SEF+ V
Sbjct: 288 IRQVFPNEKKNISEFINV 305


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 65  GSNILIYLTGHGGDGFLKFQDSEEVTSQE 93
           G ++++++   G  GF+++   E V SQE
Sbjct: 95  GYSVVVFVVVMGYIGFIEWDKVEIVRSQE 123


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.137    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,077
Number of Sequences: 317
Number of extensions: 2487
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 264
length of database: 114,650
effective HSP length: 56
effective length of query: 208
effective length of database: 96,898
effective search space: 20154784
effective search space used: 20154784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)