BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001918-TA|BGIBMGA001918-PA|IPR001096|Peptidase C13, legumain (264 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual 271 6e-74 SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D |Schi... 29 0.52 SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosacch... 27 2.1 SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 27 2.1 SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 27 2.8 SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 27 3.7 SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 26 4.9 SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po... 26 4.9 SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 25 8.5 SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyc... 25 8.5 >SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual Length = 380 Score = 271 bits (665), Expect = 6e-74 Identities = 130/229 (56%), Positives = 170/229 (74%), Gaps = 1/229 (0%) Query: 2 ACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQLL 61 ACN RN P T+F++A +++YG+++E+DY+GYEV+VE FIRLLT RVP +TP SK+LL Sbjct: 72 ACNSRNLFPGTVFDNADRALDLYGEEIEIDYKGYEVTVEAFIRLLTERVPENTPASKRLL 131 Query: 62 TDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASS 121 T+E SNILIY+TGHGGDGF+KFQD+EE++S++LADA+EQ+ Q KRYNEI F++DTCQA+S Sbjct: 132 TNERSNILIYMTGHGGDGFIKFQDAEELSSEDLADAIEQIHQHKRYNEILFMVDTCQANS 191 Query: 122 MYEKFYSPNILATASSLVGEDSLSHHVDSAIGVYIIDRYTYYVLEFLEN-VHPNSKRTMS 180 +Y K YSPN+LA SS VG S SHH D IGV +IDR+T+ LEFLEN V SK TM Sbjct: 192 LYTKIYSPNVLAIGSSEVGTSSYSHHADIDIGVAVIDRFTFSNLEFLENRVDSKSKLTMQ 251 Query: 181 EFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFFGSVRPVILTTDPIN 229 + + ST GV+ R P + ITDFFG+VR + L ++ IN Sbjct: 252 DLINSYNPYEIHSTPGVQPINLRRSPDDILITDFFGNVRDIELHSEKIN 300 >SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D |Schizosaccharomyces pombe|chr 2|||Manual Length = 1107 Score = 29.5 bits (63), Expect = 0.52 Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 178 TMSEFLAVCPKSACLSTVGVRKDLFN 203 ++S FL +CP++ CL TV V N Sbjct: 222 SLSSFLKICPRNDCLQTVDVAFQFLN 247 >SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 1294 Score = 27.5 bits (58), Expect = 2.1 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 101 MWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATASSLVGEDSLS 145 +WQ K IF + A ++ YS I+ + LVG DSL+ Sbjct: 1128 VWQSKTIEMIFRYVSD-PAEALESSLYSSLIIIGSDDLVGPDSLN 1171 >SPBC3B9.03 |||signal recognition particle receptor alpha subunit Srp101|Schizosaccharomyces pombe|chr 2|||Manual Length = 547 Score = 27.5 bits (58), Expect = 2.1 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Query: 58 KQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTC 117 K L + +GS+I ++ G+G D +++ E Q D + +R+N+ ++ + Sbjct: 394 KNLQSLKGSSIELFAQGYGKDSSFVVKNAVEYAKQNSFDVILIDTAGRRHND-QRLMGSL 452 Query: 118 QASSMYEKFYSPNILATASSLVGEDSLS 145 + + K I A +LVG DSL+ Sbjct: 453 EKFTKATKL--DKIFQVAEALVGTDSLA 478 >SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizosaccharomyces pombe|chr 1|||Manual Length = 2073 Score = 27.1 bits (57), Expect = 2.8 Identities = 10/23 (43%), Positives = 14/23 (60%) Query: 199 KDLFNRDPSKVPITDFFGSVRPV 221 K + D K+PI ++FG V PV Sbjct: 1089 KKFYAGDEKKIPIVEYFGGVPPV 1111 >SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 589 Score = 26.6 bits (56), Expect = 3.7 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 117 CQASSMYEKFYSPNI-LATASSLVGEDSLSHHVDSAIGVYIIDRYTYYVLEFLENV 171 C A + +FY+ + T S+ S V S + YI+ TYY+ + +N+ Sbjct: 325 CIAGFVVNEFYTTRTRIITPSAFKTLSLTSVMVTSFLHYYIVSTITYYIPVYFQNI 380 >SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr 2|||Manual Length = 519 Score = 26.2 bits (55), Expect = 4.9 Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 160 YTYYVLEFLENVHPNSKRTMSEFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFFG-SV 218 + YY+ +FLEN+ + ++ L S C + + L P+K+ + +V Sbjct: 324 WMYYLWQFLENLRFATPLLVTAQLTPVGISGCAAALTTGYLLKRLKPTKIMVVSMIAFTV 383 Query: 219 RPVILTTDPIN 229 +++ T PI+ Sbjct: 384 GTILIATAPIH 394 >SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces pombe|chr 1|||Manual Length = 365 Score = 26.2 bits (55), Expect = 4.9 Identities = 12/45 (26%), Positives = 22/45 (48%) Query: 44 RLLTGRVPPDTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEE 88 RL GR+PP R + +G ++ G GF++ +D+ + Sbjct: 5 RLFVGRIPPQATREDMMDFFKGYGQILDCKLMNGFGFVEVEDARD 49 >SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 1261 Score = 25.4 bits (53), Expect = 8.5 Identities = 11/30 (36%), Positives = 16/30 (53%) Query: 167 FLENVHPNSKRTMSEFLAVCPKSACLSTVG 196 F++N++PNS + L S C ST G Sbjct: 99 FVDNLNPNSSHFSASLLPASLSSLCDSTCG 128 >SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyces pombe|chr 1|||Manual Length = 490 Score = 25.4 bits (53), Expect = 8.5 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 171 VHPNSKRTMSEFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFFGSVRPVILTTDPINI 230 V NS R + ++ CPK ++ +++ +DP+ +PI FG + P +P ++ Sbjct: 302 VFANSSRNLENLIS-CPKMETPTSSVYVVNVYYKDPNVLPIRG-FGLLIPSCTPNNPNHV 359 Query: 231 V 231 + Sbjct: 360 L 360 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.320 0.137 0.405 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,197,032 Number of Sequences: 5004 Number of extensions: 49568 Number of successful extensions: 109 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 103 Number of HSP's gapped (non-prelim): 10 length of query: 264 length of database: 2,362,478 effective HSP length: 71 effective length of query: 193 effective length of database: 2,007,194 effective search space: 387388442 effective search space used: 387388442 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 53 (25.4 bits)
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