Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001917-TA|BGIBMGA001917-PA|IPR013017|NHL,
IPR011044|Quinoprotein amine dehydrogenase, beta chain-like,
IPR001258|NHL repeat
(492 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 35 0.17
12_02_0995 + 25104303-25104486,25105164-25105275,25106466-251065... 34 0.22
04_04_0755 + 27812097-27812144,27812377-27812462,27812976-278130... 33 0.68
06_01_0996 + 7746358-7746493,7747102-7747262,7747586-7747647,774... 32 0.90
08_02_0665 + 19818500-19819013,19819169-19819260,19819435-198200... 32 1.2
02_05_0224 + 26948263-26948520,26948831-26948907,26949597-269496... 32 1.2
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 31 1.6
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 31 1.6
01_01_0536 - 3926450-3928447 31 2.1
08_02_0423 - 16946435-16946542,16946924-16947045,16947442-169475... 30 3.6
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 30 3.6
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 30 4.8
01_06_1735 - 39545146-39545451,39545810-39545945,39546072-395462... 30 4.8
11_04_0268 - 15561250-15561561,15561953-15562103,15562173-155624... 29 6.4
11_02_0006 + 7274148-7274986,7275636-7277586 29 6.4
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 29 6.4
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 29 6.4
05_07_0326 + 29274287-29274428,29274577-29275379 29 8.4
03_02_0783 + 11151007-11151343,11153375-11153530,11153898-11153992 29 8.4
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 29 8.4
>03_02_0774 +
11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 34.7 bits (76), Expect = 0.17
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 240 TRLTCDEMLCPVQIAFMKSQGEIYVTDKWKHCIHVFSKDGLYLRSIG--HKGSRVGMFRS 297
+RL + P ++A ++++D + I V + +G ++ IG +G G F +
Sbjct: 564 SRLLASPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSSEEGLLDGTFDT 623
Query: 298 -----PEGIATDNANNLIYVADTGNDRVQII 323
P+G+A ++ N++YVADT N ++ +
Sbjct: 624 ASFNRPQGLAYNSKKNILYVADTENHALRTL 654
>12_02_0995 +
25104303-25104486,25105164-25105275,25106466-25106554,
25106635-25106703,25106784-25106913,25107073-25107231,
25107364-25107736,25108070-25108182,25108429-25108624,
25108855-25109288,25109360-25109495,25109668-25111086
Length = 1137
Score = 34.3 bits (75), Expect = 0.22
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 31 SATNRLNHKIEHFKDRCERITEQINKTAEDKINAIIDSKNNMLIEAVSLQKSGDMSALAL 90
S++ +N K +D +R+ Q + A + + + SK M +VS K + +
Sbjct: 652 SSSTSVNSKDHQHED--DRVVSQKKQNAHRQTDVMSPSKLRMTESSVSPIKKQHIFSQQP 709
Query: 91 KTSLEEAKTVASKAMTVSDGVNIDGEQQVTT 121
K+SLE A ++S+A S V VTT
Sbjct: 710 KSSLESANNLSSRASEASGAVTASSVMGVTT 740
>04_04_0755 +
27812097-27812144,27812377-27812462,27812976-27813037,
27813256-27813374,27813511-27813678,27813766-27813798
Length = 171
Score = 32.7 bits (71), Expect = 0.68
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 107 VSDGVNIDGEQQVTTFMNLHQNAIQLLTDVIKWDTEGFVFDKENFTLE--VDSTTPVDAE 164
+ D V+++G + L N L D IKW+ F+ DKE ++ +T+P+ E
Sbjct: 102 IFDKVDVNGNNAAPLYKYLKSNKGGLFGDSIKWNFSKFLVDKEGRVVDRYAPTTSPLSIE 161
Query: 165 SE 166
+
Sbjct: 162 KD 163
>06_01_0996 +
7746358-7746493,7747102-7747262,7747586-7747647,
7748142-7748595,7748994-7749134,7749444-7749633,
7749842-7750530,7750605-7750804,7751210-7751375,
7751850-7752046,7752162-7752396
Length = 876
Score = 32.3 bits (70), Expect = 0.90
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 135 DVIKWDTEGFVFDKENFTLEVDSTTPVDAESEDPVSEGSKHNDPLESEE 183
DV D E FV D+E E D T D +S+D EG + +D E EE
Sbjct: 382 DVTSSDDEDFVADEEVEDTEEDEYTDEDGDSDDDEDEG-EEDDNDEGEE 429
>08_02_0665 +
19818500-19819013,19819169-19819260,19819435-19820056,
19820575-19820775,19821327-19821395,19821428-19821522,
19821608-19822153
Length = 712
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 408 FGSTGQRKGQFRQPEVLAVDPMGYILVGDSGNCRVQVFKPTGQLVRVFGGFGTQPGK 464
F R F +P LAVD + V D N V+ P+G + GG PG+
Sbjct: 369 FADGEPRDAAFDRPRSLAVDHADNVYVADRMNGAVRKIAPSGFTTTIAGGRSKGPGR 425
>02_05_0224 +
26948263-26948520,26948831-26948907,26949597-26949658,
26949797-26949915,26950326-26950493,26950587-26950619
Length = 238
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 107 VSDGVNIDGEQQVTTFMNLHQNAIQLLTDVIKWDTEGFVFDKENFTLE--VDSTTPVDAE 164
+ D V+++G+ + L + L D IKW+ F+ DKE +E +T+P+ E
Sbjct: 169 IFDKVDVNGDNTAPIYKFLKSSKGGLFGDNIKWNFSKFLVDKEGRVVERYAPTTSPLSME 228
Query: 165 SE 166
+
Sbjct: 229 KD 230
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 29 LDSATNRLNHKIEHFKDRCERITEQINKTAEDKINAIIDSKNNMLIEAVSLQKS 82
L++A + L ++E+ ++ R +E + + D+IN++ DSKN + E SL+ +
Sbjct: 385 LENAVSELKKEVENLTEQ-NRSSELLIQELRDEINSLKDSKNELQNEIQSLRST 437
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 135 DVIKWDTEGFVFDKENFT-LEVDSTTPVDAESEDPVSEGSKHNDPLESEE 183
DV D E FV D+E E D T D +S+D EG + +D E EE
Sbjct: 520 DVTSSDDEDFVADEEEVEDTEEDEYTDEDGDSDDDEDEGDEDDDD-EGEE 568
>01_01_0536 - 3926450-3928447
Length = 665
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 332 LLQIIQPDGKFVDQIGVYNKLKPTGNTTLWETKEVICTELNTPTAVALTADRIIILDSGN 391
L+ ++ GK + + +K+ N+T+W T C L A+R++ LD N
Sbjct: 436 LIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDN 495
Query: 392 RRVKVYNKN 400
+ N
Sbjct: 496 STAYILLSN 504
>08_02_0423 -
16946435-16946542,16946924-16947045,16947442-16947504,
16949707-16949844,16950062-16950170,16950610-16950934,
16952482-16952645
Length = 342
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 268 WKHCIHVFSKDGLYLRSIGHKGSRVGMFRSPEGIATDNANNLIYVADTGNDRV--QIILK 325
W H + GLY+ SR G+FR P G+A + +Y + ND + +I L+
Sbjct: 197 WTVDAHHEERKGLYIGQGITAMSRSGIFRVPHGVAVEMTER-VYKLPSFNDVLEGEIFLQ 255
Query: 326 PKSGIILLQIIQP 338
++ +++ P
Sbjct: 256 NLPSVVAARVLDP 268
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 29 LDSATNRLNHKIEHFKDRCERITEQINKTAEDKINAIIDSKNNMLIEAVSLQKS 82
L++A + L ++E ++ R +E + + D+IN++ DS+N + E SL+ +
Sbjct: 605 LENAVSELKKEVESLTEQ-NRSSELLIQELRDEINSLTDSRNELQNEIQSLRST 657
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 135 DVIKWDTEGFVFDKENFT-LEVDSTTPVDAESEDPVSEGSKHNDPLESEE 183
DV D E FV D+E + D T D +S+D EG + +D E EE
Sbjct: 218 DVTSSDDEDFVADEEEVEDTKEDEYTDEDGDSDDDEDEGEEDDDD-EGEE 266
>01_06_1735 -
39545146-39545451,39545810-39545945,39546072-39546214,
39546700-39546828,39547198-39547446,39548032-39548403
Length = 444
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 12/65 (18%)
Query: 11 WSQHLDDMRTQIGSILKQLDSATNRLNHKIEHFKDRCERITEQINKTAEDKINAIIDSKN 70
+ H++++ + + Q+D N+L+H E+ D ED IN ++D K
Sbjct: 316 YKPHIEELEMLLEAYFVQIDGTLNKLSHLREYVDD------------TEDYINIMLDDKQ 363
Query: 71 NMLIE 75
N L++
Sbjct: 364 NQLLQ 368
>11_04_0268 -
15561250-15561561,15561953-15562103,15562173-15562404,
15562878-15563091,15563240-15563367,15564347-15564524
Length = 404
Score = 29.5 bits (63), Expect = 6.4
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 91 KTSLEEAKTVASKAMTV--SDGVNIDGEQQVTTFMNL-HQNAIQLL 133
K SL+ KTVA K +TV + D E +V N+ H+N ++LL
Sbjct: 102 KASLKNGKTVAVKRLTVMETSRAKADFESEVKLISNVHHRNLVRLL 147
>11_02_0006 + 7274148-7274986,7275636-7277586
Length = 929
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 119 VTTFMNLHQNAIQLLTDVIKWDTEGFVFDKENFTLE 154
++TF H+ +L V KW EGF+ K+ FTLE
Sbjct: 438 LSTFPEDHEIRKDIL--VWKWIAEGFIITKQGFTLE 471
>10_08_0259 +
16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 29.5 bits (63), Expect = 6.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 11 WSQHLDDMRTQIGSILKQLDSA 32
W LDD+ T I +L+QLD+A
Sbjct: 175 WESELDDLETHIAVLLEQLDAA 196
>09_04_0151 -
15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 29.5 bits (63), Expect = 6.4
Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 84 DMSALALKTSLEEAKTVASKAMTVSDGVNIDGEQQVTTFMNLHQNAIQLLTDVIKWDTEG 143
D +L K L+ K+ + NI E + + ++ + L +V+ +
Sbjct: 762 DEQSLDQKDELQRLKSSLESCEKAMEDCNIQNELEKDSILS---ELLTLQKEVVYLSSSS 818
Query: 144 FVFDKENFTLEVDSTTPVDAESEDPVSEGSKHNDPLESEES 184
+ +KE+ E+D T E+E+ + + LESE++
Sbjct: 819 LMKEKESIRKELDRTKTKLKETENKLKNSIQEKIKLESEKA 859
>05_07_0326 + 29274287-29274428,29274577-29275379
Length = 314
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 146 FDKENFTLEVDSTTPVDAESEDPVSEGSKHN 176
F KE+F ++VD T + + P + GSKHN
Sbjct: 49 FKKEDFRVQVDGTGKLTVRGQRPAA-GSKHN 78
>03_02_0783 + 11151007-11151343,11153375-11153530,11153898-11153992
Length = 195
Score = 29.1 bits (62), Expect = 8.4
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 118 QVTTFMNLHQNAIQLLTDVIKWDTEGFVFDKENFTLEVDSTTPVDAESEDPVS---EGSK 174
QV + Q+ ++L+ +I+WD G D E +E D+ P PV+ E K
Sbjct: 93 QVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVIEDDTLIPKHVPQHRPVALPEEFFK 152
Query: 175 HNDPLESEESL 185
D ++S+ +L
Sbjct: 153 TLDAVKSDPAL 163
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 29.1 bits (62), Expect = 8.4
Identities = 34/173 (19%), Positives = 76/173 (43%), Gaps = 16/173 (9%)
Query: 16 DDMRTQIGSILKQLDSATNRLNHKIEHFKDRCERITEQINKTAEDKINAIIDSKNNMLIE 75
D T + + +Q+D+ ++ ++EHFK +QI + E + I+++ L
Sbjct: 598 DKKMTDLVTKQQQMDAESDHAKSELEHFKVGIASTMKQIG-SLEKALGKKIETRKEELKA 656
Query: 76 AVSLQKSGDMSALALKTSLEEAKTVASKAMTVSDGVNIDGEQQVTTFMNLHQNAIQLLTD 135
+S L +E + V S A + + + + ++Q +N ++++ LT
Sbjct: 657 NLSTN---------LMRRQKEFEAVISSADSKTLSLEAESKEQE---LNSSKSSLDDLTA 704
Query: 136 VIKWDTE---GFVFDKENFTLEVDSTTPVDAESEDPVSEGSKHNDPLESEESL 185
++K + + F E + D+ ++A + V +G+K + L S S+
Sbjct: 705 MLKANVDAINNFTIKIEELKRQRDNLKTLEANLDQTVRDGAKDLEQLMSSRSM 757
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.135 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,137,017
Number of Sequences: 37544
Number of extensions: 603154
Number of successful extensions: 1420
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1405
Number of HSP's gapped (non-prelim): 28
length of query: 492
length of database: 14,793,348
effective HSP length: 85
effective length of query: 407
effective length of database: 11,602,108
effective search space: 4722057956
effective search space used: 4722057956
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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