BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001917-TA|BGIBMGA001917-PA|IPR013017|NHL, IPR011044|Quinoprotein amine dehydrogenase, beta chain-like, IPR001258|NHL repeat (492 letters) Database: mosquito 2123 sequences; 516,269 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 28 0.65 AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 27 1.5 >AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. Length = 1187 Score = 27.9 bits (59), Expect = 0.65 Identities = 15/71 (21%), Positives = 32/71 (45%) Query: 28 QLDSATNRLNHKIEHFKDRCERITEQINKTAEDKINAIIDSKNNMLIEAVSLQKSGDMSA 87 QL + LN+++ + K R + + Q K +++N I++ ++EA Q Sbjct: 712 QLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKV 771 Query: 88 LALKTSLEEAK 98 L+ + + K Sbjct: 772 KDLQAKIADGK 782 >AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. Length = 1376 Score = 26.6 bits (56), Expect = 1.5 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 39 KIEHFKDRCERITEQINKTAEDKINAIIDSKNNMLIEAVSLQKSGDMSALALKTSLEEAK 98 K + + +R TEQIN+ K+ ++ +K N L + + + S ++S L ++ E Sbjct: 872 KADAMQKNVDRYTEQINEITNSKVK-VLQTKINGLGKQID-KLSANISKLTVEIKTSERN 929 Query: 99 TVASK 103 SK Sbjct: 930 VQKSK 934 Database: mosquito Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 516,269 Number of sequences in database: 2123 Lambda K H 0.318 0.135 0.400 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 503,338 Number of Sequences: 2123 Number of extensions: 21386 Number of successful extensions: 24 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 21 Number of HSP's gapped (non-prelim): 3 length of query: 492 length of database: 516,269 effective HSP length: 67 effective length of query: 425 effective length of database: 374,028 effective search space: 158961900 effective search space used: 158961900 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 50 (24.2 bits)
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