GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001916-TA|BGIBMGA001916-PA|undefined
         (269 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    23   2.4  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   3.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.6  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    21   7.4  

>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 243 IMLAVVMVIFISKCSAYLDF 262
           + L VV++ F+  C+A L+F
Sbjct: 4   MFLIVVLIAFVGVCTAQLNF 23


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
          protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 40 DGNWRLKKYVESLSSMITELKT 61
          D +  + +YVESL+S+I E  T
Sbjct: 53 DNDPHVNEYVESLASIIDEAAT 74


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 40  DGNWRLKKYVESLSSMITELKT 61
           D +  + +YVESL+S+I E  T
Sbjct: 367 DNDPHVNEYVESLASIIDEAAT 388


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 40  DGNWRLKKYVESLSSMITELKT 61
           D +  + +YVESL+S+I E  T
Sbjct: 600 DNDPHVNEYVESLASIIDEAAT 621


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 40  DGNWRLKKYVESLSSMITELKT 61
           D +  + +YVESL+S+I E  T
Sbjct: 600 DNDPHVNEYVESLASIIDEAAT 621


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 64  DKPSKDILSEYSKRAAFLKGVVQTATLST 92
           D+P +    E+  R A  +G++  A + T
Sbjct: 256 DRPPRHFHEEHDTRRASSRGIIPRAKIKT 284


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/20 (30%), Positives = 14/20 (70%)

Query: 243 IMLAVVMVIFISKCSAYLDF 262
           ++L V+++  +  C+A L+F
Sbjct: 4   VLLTVLLITIVGLCAAQLNF 23


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.126    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,312
Number of Sequences: 317
Number of extensions: 1821
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 269
length of database: 114,650
effective HSP length: 56
effective length of query: 213
effective length of database: 96,898
effective search space: 20639274
effective search space used: 20639274
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 42 (21.0 bits)