Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001916-TA|BGIBMGA001916-PA|undefined
(269 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr 1|||Ma... 46 6e-06
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 35 0.014
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 33 0.033
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 33 0.043
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 31 0.23
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 30 0.30
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 30 0.30
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 30 0.40
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 29 0.53
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.53
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 29 0.70
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 29 0.93
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 28 1.2
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 28 1.6
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 27 2.1
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 2.1
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 27 2.1
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.1
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 27 2.8
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 27 2.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.8
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac... 27 2.8
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 26 5.0
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 26 6.6
SPBC24C6.07 |cdc14||SIN component Cdc14|Schizosaccharomyces pomb... 26 6.6
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 8.7
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 8.7
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 8.7
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.7
>SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 46.0 bits (104), Expect = 6e-06
Identities = 20/87 (22%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 168 ILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESE 227
+L ++MQ +++E+++ L LKE + + + D + ++++ L D+N SL+ +
Sbjct: 122 LLTNQRSMQTEISESLLHLASVLKENALSFTNALVTDNQVVERTGSLLDKNAHSLRHANH 181
Query: 228 RLQEHSRSAWKCWLWIMLAVVMVIFIS 254
+Q +S+S + W+ L +++ + +S
Sbjct: 182 GVQSYSKSK-RLSFWLQLGMIIAVVVS 207
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 34.7 bits (76), Expect = 0.014
Identities = 46/242 (19%), Positives = 111/242 (45%), Gaps = 14/242 (5%)
Query: 6 PKLSTVPVPKKSRLEMNVRQLLSKCELIAKEESID--GNWRLKKYVESLSSMITELKTG- 62
P L +V S L+ +V+++ + E+I+ + + N +LK+ VES + +I +L+ G
Sbjct: 1151 PDLDSVMKLGLSDLQNHVKRISKEMEIISCQRQLLFLENKKLKRTVESSNRVIADLQRGI 1210
Query: 63 PDKPSKDILSEYSKRAAFLKGVV----QTATLSTPIEK-LEAVQQLSHGAATMSVD-ATQ 116
+K +R+ +L V +L +E+ E + +L T+ D A
Sbjct: 1211 TEKDVSSTSESVGERSNYLNMVALLNESNKSLRENLERNEEVITELREKIETLKTDLANF 1270
Query: 117 EIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQ 176
++++ + ++ + L+++++ ++ N + S+T++ D S LK +
Sbjct: 1271 RLNKEQLESQLQTEKAAVKKLENSNEEYKRHNQEILLSLNSSTSTSSDA-SRLKNELVSK 1329
Query: 177 EKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQEHSRSA 236
E + E + +LK + + +K+ +E L+ + L++++ +L R+
Sbjct: 1330 ENLIEELNQEIGHLKSELE----TVKSKSEDLENERAQNQSKIEQLELKNTKLAAAWRTK 1385
Query: 237 WK 238
++
Sbjct: 1386 YE 1387
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 33.5 bits (73), Expect = 0.033
Identities = 25/122 (20%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 150 IKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKAD-TEAL 208
+K+ + T + ++ +++ + N+ + + ++ TKN++ ++A T + +
Sbjct: 3750 LKSISRTQVDLTNDEFLNLMNFVLNLFDSLLSSIETATKNMRTFKELAETSSFIEMSSCF 3809
Query: 209 KKSSDLTDRNLSSLKVES--ERLQEHSRSAWKCWLWIMLAVVMVIFISKCSAYLDFFA-I 265
K + S+K+ S E+L+ S C L ++ V FI+ + LD+F +
Sbjct: 3810 SKVLRAFNLKFQSMKLSSLKEKLRSSSVDKMSCQLLMLFLPVCEQFINLAESVLDYFINV 3869
Query: 266 HN 267
HN
Sbjct: 3870 HN 3871
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.1 bits (72), Expect = 0.043
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 88 ATLSTPIEKL-EAVQQLSHGAATMSV---DATQEIHQKTVAKYGVELRSELFGLDDNDDS 143
++L T +KL E+ Q+L + T++ D + ++ Q + + E + D+N+D
Sbjct: 605 SSLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLS-DENND- 662
Query: 144 LRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTI--I 201
LR + + + S QED+DS+ K Q ++E + ++ L + E + I +
Sbjct: 663 LRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNL 722
Query: 202 KADTEALKKSSDLTDRNLSSLK 223
K E L+ + +LS K
Sbjct: 723 KGKHETLEAQRNDLHSSLSDAK 744
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 30.7 bits (66), Expect = 0.23
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 139 DNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQ-NMQEKVAENMVMLTKNLKEQSQIA 197
DN DS +I P QE D +LK ++ ++ K + + +N ++ ++A
Sbjct: 48 DNQDS-NAEILIDVPKEERQKRKQELKDQLLKENEGSISSKKKKRLDKYIENKLKKEEVA 106
Query: 198 STIIKADTEALKKSSDLTDRNLSSLKVESERLQE 231
S I K E + S + +NL E+L++
Sbjct: 107 SLIAKLAEERIDTSLLSSSKNLGKQATAKEKLKK 140
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 30.3 bits (65), Expect = 0.30
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 15 KKSRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITE-LKTGPDKPSKDILSE 73
+K L + + SK EL+AKEE I +W + K+ E+L + E +K D+ ++ + +E
Sbjct: 635 RKMMLNLEPKLAKSKPELLAKEEGITDSW-IVKHHETLYELEKEKIKKKFDRENEKLAAE 693
Query: 74 YSK 76
K
Sbjct: 694 DPK 696
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 30.3 bits (65), Expect = 0.30
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQ 173
+T+E Q+ + +E +S++ ND +K+ T S ED++ K H
Sbjct: 259 STEEYEQQMITIRHLESQSDIINTTIND--------LKS-QMTITDESSEDLE---KLHS 306
Query: 174 NMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE 231
N EKV E L K+L+++ +++K+ E L+K LT +L ++ E E L++
Sbjct: 307 NFAEKVKEEQ-ELYKSLEKKRSDLESLLKSRRELLEK---LTG-DLGKIQGEIESLEK 359
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 29.9 bits (64), Expect = 0.40
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 112 VDATQEIHQKTVA--KYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSIL 169
V++ QE+ QK V K V++ +F L + L ++N + + + +T D + I
Sbjct: 44 VESIQELFQKCVIEEKLPVDIFFSIFSLAF--ERLEEKNTLAS--YVIDTLWLFDTEWIK 99
Query: 170 KYHQNMQEKVAENMVMLTKNLKE 192
+H+ +K + +V + K LKE
Sbjct: 100 NFHEGSHDKAEKRLVSIGKGLKE 122
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 29.5 bits (63), Expect = 0.53
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 18 RLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGP--DKPSKDILSEYS 75
+ E + QL S+ A + + +LK+ +E + L +K +KD+L Y
Sbjct: 1023 KFEYDTEQLPSRVLFYAMDRYFSIHKKLKQLLELVGVENASLLPNEVVNKQTKDLL--YE 1080
Query: 76 KRAAFLKGVVQTATLST 92
KR FLK + Q T+S+
Sbjct: 1081 KRVVFLKQIKQALTVSS 1097
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.5 bits (63), Expect = 0.53
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 113 DATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSN----TTSQEDIDSI 168
+A I QK + +Y R +L N + N +K+ S+ +TS + SI
Sbjct: 1066 EAELVIFQKEITEY----RDQLHKAFQNPEKTHNINDVKSGPLNSDENIYSTSSTTL-SI 1120
Query: 169 LKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTD 216
LK Q ++ + L++ +KE S++ I + + +K+S+L D
Sbjct: 1121 LKDVQELKSLHTKEANQLSERIKEISEMLEQSIATEEKLRRKNSELCD 1168
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 29.1 bits (62), Expect = 0.70
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 125 KYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMV 184
+Y + L+SE LD + + +R R+ +F + S ++ H+NM + + +
Sbjct: 879 EYDILLKSE-HELDSSLEEMRNRHKSLNEHFIMLSDSMANLQV---EHENMSALLLKEKM 934
Query: 185 MLTKNLKEQSQIASTIIKADTEALKKSSDL 214
L EQ+ + S I +++ K+ S++
Sbjct: 935 YLKNQTVEQASLKSEIASLNSQLAKQKSEI 964
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.93
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 6 PKLSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDK 65
P+L+T+PV N QLL K I K E + N ++ + + L ++T+ +
Sbjct: 275 PELNTIPVASTDEQLFNAHQLLEKKFEILKRERNECNAKIDELQDKL-ELLTDAYNREKR 333
Query: 66 PSKDILSEYSK 76
++ + SK
Sbjct: 334 RARSLEERMSK 344
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 28.3 bits (60), Expect = 1.2
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 33 IAKEESIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLST 92
+ KE S+ R K +ES S T+L + PD +LSE+SK K + T
Sbjct: 769 VLKEASMIYMLRNGKIIESGS--FTQLSSSPDSQLFQLLSEFSK-----KDTASSTGADT 821
Query: 93 PIEKLEAVQQLS---HGAATMSVDATQEIHQKTVAKYGVELRSELFGLDD 139
P+ + ++V S +A+ S D + T+ G +R L D+
Sbjct: 822 PLSRSQSVITSSTDVTSSASRSSDTVSNYPKATIKGTG-RIRKRLTDEDN 870
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 27.9 bits (59), Expect = 1.6
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 33 IAKEESIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLST 92
I + I+ N R YVE+L + TE P P K LSE KR A+L Q S
Sbjct: 59 IVLDSEIEFN-RTIVYVENLQTT-TEANI-PPIPRKSKLSETGKRPAYLLKPFQPPFHSA 115
Query: 93 PIEKLEAVQQLSHGAATMSVDATQEIH-QKTVAKYGVELRSELFGLDDND-DSLR 145
+ V S+GA + ++ T H T + + +G+DD+D SLR
Sbjct: 116 NSD----VSNNSNGALSSNMLKTHAHHTNSTKSTIFRNANLQSYGVDDSDIGSLR 166
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 49 VESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPI 94
VE LS+ + + D P LSE F+K ++TA+ STPI
Sbjct: 15 VEKLSAQLEKTTLLQDIPPGS-LSENDNSTTFIKPPLETASSSTPI 59
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 161 SQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDL---TDR 217
++E +D +K +EK+ E++ NL+EQ+Q+A + + +K DL D
Sbjct: 618 TKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDY 677
Query: 218 NLSSLKVESERLQ 230
S+ K E +Q
Sbjct: 678 TKSNCKQMEEEMQ 690
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 27.5 bits (58), Expect = 2.1
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 85 VQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSL 144
++ T S+P KLE V + S+GA + + ++TVA ++ LD ++D +
Sbjct: 1 MENNTASSPYTKLELVGRGSYGAVYRGI---CNLTKETVA-------IKILNLDTDEDEV 50
Query: 145 RKRNIIKTPNFTSNTTSQEDIDSILKYH 172
+ I+ + Q D+++I+KYH
Sbjct: 51 ---SDIQKEVAVLSELKQSDVENIIKYH 75
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 27.5 bits (58), Expect = 2.1
Identities = 46/226 (20%), Positives = 94/226 (41%), Gaps = 22/226 (9%)
Query: 16 KSRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYS 75
K E +++L K + KEE I N +L + L S ELK +K + S +
Sbjct: 26 KEETENQLKELEKKRSQLHKEEQI--NLQLVYAINDLRSKTKELKAENEKEDTFLNSFNA 83
Query: 76 KRAAFLKGVVQTATLSTPIEKL-----EAVQQLS--HGAATMSVDATQEIHQKTVAKYGV 128
+Q S +E+ + V+++ H +A+ ++ + Q+ V
Sbjct: 84 SGDLTANKKIQLREQSRKLEESLLSYHKKVKEMEKQHRSASSKLELAKLSAQQLQTNVNV 143
Query: 129 -------ELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAE 181
E+ ++ + SL ++++ + ++ Q D D I K H ++ +
Sbjct: 144 LRSQNNPEILQDMISETKDCRSLIAEQLLQSASLLNDF--QNDSDRIAKNHSSLIDTSRA 201
Query: 182 NMVMLTKNLKEQSQIASTII---KADTEALKKSSD-LTDRNLSSLK 223
+ V LT K + I +++ + D+E + S + LT + +S L+
Sbjct: 202 HRVSLTNATKNYTHIFDSLLTFTRHDSEDVSTSVEKLTSKKISELE 247
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 194 SQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQEHSRSAWKCWLW 242
SQ+A I+ + S+ + D S LKV+ ++QE ++ WLW
Sbjct: 115 SQVAHNILVWLENLIPLSNGMDDTPKSHLKVKILKVQETLSNSNDSWLW 163
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 27.1 bits (57), Expect = 2.8
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 42 NWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPI-EKLEA- 99
N +L E S++ +ELK P + S + EY + +K V T S I E EA
Sbjct: 570 NTKLNPKEEDKSTVESELKAPPKEKSSETSKEYLNEPSVVKDFVVERTPSDKISESKEAF 629
Query: 100 ---VQQLSHGAATMSVDATQEIHQKTVAKYGVELRSE----LFGLDDNDDSLRKRNIIKT 152
V+++S A E+ +K + G ++ E + LD+N + K + T
Sbjct: 630 DAKVEEISDQRAIS--QRYYELRKKMIDNTGEYIKDEEEQAVIPLDENGNEKPKMSRFMT 687
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.1 bits (57), Expect = 2.8
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Query: 144 LRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKA 203
L +N T N Q++I+S+ + +QE + + +TK EQ
Sbjct: 1439 LTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQITKEQFEQ---------- 1488
Query: 204 DTEALKKSSDLTDRNLSSLKVESERLQEHSRSA 236
LK + T++ L+ K E E LQ + A
Sbjct: 1489 ----LKSEKERTEKELADSKNELEHLQSEAVDA 1517
>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
Vps23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 487
Score = 27.1 bits (57), Expect = 2.8
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 11/186 (5%)
Query: 53 SSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATL---STPIEKLEAVQQLSHGAAT 109
SS I K P KP ++ + +K LK L + K + VQQ+S +
Sbjct: 246 SSNIPAQKPIPPKPEQNEII-ITKDTPSLKDKYSKPALLPQKPKVSKGQIVQQVSVFSTG 304
Query: 110 MSVDATQEIHQ-KTVAKYGVELRSELFGLDD---NDDSLRKRNIIKTPN--FTSNTTSQE 163
+++ ++ T + ++ SEL +D N D ++ + I+ N SQ
Sbjct: 305 KKIESQSLLNLIDTDIETPLKGSSELLYSEDFKPNVDPVKIQQILHKQNKIIEEKWISQI 364
Query: 164 DIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSL- 222
I L+ Q + ++ + L KN++ I + EAL+K +L D ++ L
Sbjct: 365 RISKNLEVKQRLLDQERHALETLAKNIENNRFILGKRRRKAREALQKLDNLKDLSVQELF 424
Query: 223 KVESER 228
+ SER
Sbjct: 425 IIPSER 430
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 149 IIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLK 191
++ TP+F ++ + D IL+Y ++ + V E + +N +
Sbjct: 116 VLDTPHFGEAIDNENNFDIILQYIESQYDNVLEEESRIKRNAR 158
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 50 ESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIE 95
E L++ T+ +TG D+P++ + R F+ ++AT +TP+E
Sbjct: 201 EELNNANTDGRTGVDEPARQLHRIAFNRIRFILAPNRSAT-NTPVE 245
>SPBC24C6.07 |cdc14||SIN component Cdc14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 240
Score = 25.8 bits (54), Expect = 6.6
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 140 NDDSLRKRNIIK---TPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQI 196
+DD + + +K +P + S T +DS+L+Y QN +E +N + K + + +
Sbjct: 39 HDDKIPREIFLKLQDSPLYNSTTPCIYALDSLLEYQQN-EEAYEKNFQFIQKLIDDLLHV 97
Query: 197 ASTII 201
++
Sbjct: 98 IEGLV 102
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.4 bits (53), Expect = 8.7
Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 13/201 (6%)
Query: 24 RQLLSKCELIAKE-ESID-GNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFL 81
R L +K + KE E+I+ N L +++L I E+ + K + + ++ F+
Sbjct: 892 RNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEIGGIRYRIQKSKVDDLHEQLKFV 951
Query: 82 KGVVQTATLSTPIEKLEAVQ-QLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDN 140
K + + + + Q+ T D T E ++A EL+S +D++
Sbjct: 952 KDKLNKMSFKKKKNEQRSQSFQVELSNLTSEYDTTTE----SIATLKTELQSLNKYVDEH 1007
Query: 141 DDSLRK-RNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIAST 199
LR+ N + N +S +++ +++ V + L ++EQ S
Sbjct: 1008 KSRLREFENALWDIN-----SSIDELVKFIEFESKQMNSVKAERIELENQIQEQRTALSE 1062
Query: 200 IIKADTEALKKSSDLTDRNLS 220
+ + + LK S+L NL+
Sbjct: 1063 VGNNENKYLKLMSNLKLHNLT 1083
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 174 NMQEKVAENMVMLTKNLKEQSQIASTI-------IKADTEALKKSSDLTDRNLSSLKVES 226
+++ VAEN+ M +++EQ+ +S + IK + E + K + L + S + ES
Sbjct: 421 SIRADVAENIEMGINSIREQAAASSEVALAACSGIKHNAEQVNKLNALIQKVYSYITAES 480
Query: 227 ERL 229
E++
Sbjct: 481 EKV 483
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 186 LTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQEHSRSAWKCWLW 242
L + L +Q +A + +K ++E K++S+ + +L +LQ + LW
Sbjct: 345 LVEELTKQLHVAESTLKENSEKFKQNSESLKSRVDNLNDYITKLQNEIDECRRNLLW 401
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 163 EDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSL 222
++ D I+K +E AE + + K K +S + ++ +S+ + +SSL
Sbjct: 5 QENDPIIKSADESKESPAETLSSIFKRPKIKSSSLNKAYLGKAGSVNGASNTSTNQISSL 64
Query: 223 KVE 225
KV+
Sbjct: 65 KVD 67
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.126 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,109,955
Number of Sequences: 5004
Number of extensions: 42231
Number of successful extensions: 190
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 174
Number of HSP's gapped (non-prelim): 32
length of query: 269
length of database: 2,362,478
effective HSP length: 72
effective length of query: 197
effective length of database: 2,002,190
effective search space: 394431430
effective search space used: 394431430
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 53 (25.4 bits)
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