BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001916-TA|BGIBMGA001916-PA|undefined (269 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g55600.1 68416.m06175 expressed protein predicted proteins, A... 49 3e-06 At1g54110.1 68414.m06168 cation exchanger, putative (CAX10) Ca2+... 42 6e-04 At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 36 0.029 At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 33 0.27 At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 33 0.27 At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) iden... 31 0.62 At4g36550.1 68417.m05190 U-box domain-containing protein low sim... 31 0.62 At5g54480.1 68418.m06784 hypothetical protein 31 0.81 At1g03760.1 68414.m00356 prefoldin subunit family protein contai... 31 1.1 At2g43640.1 68415.m05424 signal recognition particle 14 kDa fami... 30 1.4 At5g48660.1 68418.m06022 expressed protein ; expression supporte... 30 1.9 At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family pr... 30 1.9 At3g45680.1 68416.m04937 proton-dependent oligopeptide transport... 30 1.9 At2g28620.1 68415.m03479 kinesin motor protein-related 29 2.5 At2g28150.1 68415.m03419 expressed protein 29 2.5 At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.5 At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 29 3.3 At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 3.3 At3g52300.1 68416.m05748 ATP synthase D chain-related contains w... 29 3.3 At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 29 3.3 At2g29040.1 68415.m03530 exostosin family protein contains Pfam ... 29 3.3 At2g22795.1 68415.m02704 expressed protein 29 3.3 At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative ... 29 3.3 At5g38840.1 68418.m04698 forkhead-associated domain-containing p... 29 4.3 At5g28800.1 68418.m03541 hypothetical protein predicted protein,... 29 4.3 At5g23880.1 68418.m02805 cleavage and polyadenylation specificit... 29 4.3 At4g30993.2 68417.m04400 expressed protein 29 4.3 At4g30993.1 68417.m04399 expressed protein 29 4.3 At3g62940.2 68416.m07071 OTU-like cysteine protease family prote... 29 4.3 At3g62940.1 68416.m07070 OTU-like cysteine protease family prote... 29 4.3 At3g27350.1 68416.m03420 expressed protein 29 4.3 At1g68670.1 68414.m07846 myb family transcription factor contain... 29 4.3 At5g32605.1 68418.m03879 hypothetical protein 28 5.7 At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR... 28 5.7 At3g12060.1 68416.m01500 expressed protein similar to hypothetic... 28 5.7 At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 28 5.7 At2g25680.1 68415.m03078 expressed protein ; expression supporte... 28 5.7 At2g06140.1 68415.m00675 hypothetical protein 28 5.7 At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:71... 28 5.7 At5g13460.1 68418.m01549 calmodulin-binding family protein low s... 28 7.6 At5g01840.1 68418.m00103 ovate family protein 59% similar to ova... 28 7.6 At4g24950.1 68417.m03574 hypothetical protein 28 7.6 At3g13870.2 68416.m01752 root hair defective 3 (RHD3) identical ... 28 7.6 At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical ... 28 7.6 At3g05900.1 68416.m00664 neurofilament protein-related similar t... 28 7.6 At3g05380.1 68416.m00588 myb family transcription factor contain... 28 7.6 At1g77500.1 68414.m09025 expressed protein contains Pfam domains... 28 7.6 At1g03830.1 68414.m00364 guanylate-binding family protein contai... 28 7.6 >At3g55600.1 68416.m06175 expressed protein predicted proteins, Arabidopsis thaliana Length = 240 Score = 49.2 bits (112), Expect = 3e-06 Identities = 50/244 (20%), Positives = 111/244 (45%), Gaps = 24/244 (9%) Query: 17 SRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITEL---KT--GPDKPSKDIL 71 S+ E+N+R+LLS + +L YV +L + +L KT G + +K + Sbjct: 5 SKTEINLRRLLSAAPNQQNQS------KLMHYVATLREQLEQLSEEKTPEGLPRVTKAKV 58 Query: 72 SEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELR 131 +EY ++ + + + T + + + G++ +I + + +LR Sbjct: 59 NEYYEKIEAVASKIASQEPETEVSDEPFAKDSTSGSSP-------KIEDEPRSPTSPQLR 111 Query: 132 SELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLK 191 + + S + + +T +Q ID H+ +QE + + MV+L + LK Sbjct: 112 RRIVPASSKEQSFDAADADSSKPIKLDTAAQAHIDK----HRKLQEDLTDEMVVLARQLK 167 Query: 192 EQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE-HSRSA-WKCWLWIMLAVVM 249 E+SQ S ++ + L + + +++L+S + R + +S+S+ C+ W+++ ++ Sbjct: 168 ERSQAISQSVQNTEKILDSTEEAIEQSLASTGHATTRATKIYSQSSKTSCFQWLLIFAMI 227 Query: 250 VIFI 253 +FI Sbjct: 228 CVFI 231 >At1g54110.1 68414.m06168 cation exchanger, putative (CAX10) Ca2+:Cation Antiporter (CaCA) Family member PMID:11500563 Length = 236 Score = 41.5 bits (93), Expect = 6e-04 Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 4/84 (4%) Query: 173 QNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSS---LKVESERL 229 + +QE + + MV+L + LKE+SQ+ S ++ + L + + +++L+S V + ++ Sbjct: 145 RKLQEDLTDEMVVLARQLKERSQMISQSVQNTEKILDSTEEAIEQSLASTGHATVRATKI 204 Query: 230 QEHSRSAWKCWLWIMLAVVMVIFI 253 S S C+ W+++ + +FI Sbjct: 205 YSES-SKTSCFQWLLILAMTCVFI 227 >At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO, N-terminus; similar to cytosolic factor (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PCTP) (SP:P24280) [Saccharomyces cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700 come from this gene Length = 540 Score = 35.9 bits (79), Expect = 0.029 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 11/193 (5%) Query: 4 EKPKLSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGP 63 EK LS + + + N K E +E + + + VE E K Sbjct: 68 EKKALSDLKSKLEEAIVDNTLLKTKKKESSPMKEKKEEVVKPEAEVEKKKEEAAEEKVEE 127 Query: 64 DKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 123 +K S+ +++E + +A ++ VV + P E++ V + + T+E +KT Sbjct: 128 EKKSEAVVTEEAPKAETVEAVVTEEII--PKEEVTTVVEKVE-------EETKEEEKKTE 178 Query: 124 AKYGVELRSELFGLDDNDDSLRKR-NIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAEN 182 E+++E ++D D+S+ K + P S D+ +LK+ + KV E Sbjct: 179 DVVTEEVKAETIEVEDEDESVDKDIELWGVPLLPSKGAESTDV-ILLKFLRARDFKVNEA 237 Query: 183 MVMLTKNLKEQSQ 195 ML K LK + Q Sbjct: 238 FEMLKKTLKWRKQ 250 >At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a 'Morpheus molecule') [Arabidopsis thaliana] gi|8132770|gb|AAF73381.1| Length = 2001 Score = 32.7 bits (71), Expect = 0.27 Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Query: 57 TELKTGPDKPSKDILSEYSKRAAFLKGVVQT---ATLSTPIEKLEAVQQLSHGAATMSVD 113 T L G D P K + +E K +V+T + + +P E LE Q+L G S Sbjct: 198 TSLDKGTDFPLKSV-TETEKIVLDASPIVETGDDSVIGSPSENLET-QKLQDGKTDCSPP 255 Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILK 170 A E V + +E DDN D L N T+ ++D D LK Sbjct: 256 ANAESKTLPVGETSLEKEYPQKFQDDNTDCLPPANAESKRLPVGETSLEKDTDFPLK 312 >At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a 'Morpheus molecule') [Arabidopsis thaliana] gi|8132770|gb|AAF73381.1| Length = 2001 Score = 32.7 bits (71), Expect = 0.27 Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Query: 57 TELKTGPDKPSKDILSEYSKRAAFLKGVVQT---ATLSTPIEKLEAVQQLSHGAATMSVD 113 T L G D P K + +E K +V+T + + +P E LE Q+L G S Sbjct: 198 TSLDKGTDFPLKSV-TETEKIVLDASPIVETGDDSVIGSPSENLET-QKLQDGKTDCSPP 255 Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILK 170 A E V + +E DDN D L N T+ ++D D LK Sbjct: 256 ANAESKTLPVGETSLEKEYPQKFQDDNTDCLPPANAESKRLPVGETSLEKDTDFPLK 312 >At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) identical to peroxisomal ABC transporter PXA1 GI:15320529 from [Arabidopsis thaliana]; contains Pfam profile PF00005: ABC transporter; Length = 1337 Score = 31.5 bits (68), Expect = 0.62 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 38 SIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLST 92 SID + RL + +E L++ ++ L TG KPS DIL ++ R L G A L T Sbjct: 859 SIDADQRLTRDLEKLTADLSGLLTGMVKPSVDIL-WFTWRMKLLTGQRGVAILYT 912 >At4g36550.1 68417.m05190 U-box domain-containing protein low similarity to immediate-early fungal elicitor protein CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam profile PF04564: U-box domain Length = 577 Score = 31.5 bits (68), Expect = 0.62 Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 5/92 (5%) Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKT-PNFTSNTTSQEDIDSILKYH 172 A + + ++ + V L SE+ +++L ++ P+ S TS + S+LK Sbjct: 316 AIESLEEEVFKMFSVFLESEVVA----EEALNILEVLSNHPHGPSKITSSGSLSSLLKIV 371 Query: 173 QNMQEKVAENMVMLTKNLKEQSQIASTIIKAD 204 ++ E + E ++ KNL +I ++ D Sbjct: 372 ESQAEHLQEQAMITLKNLSSSMEICLEMVSLD 403 >At5g54480.1 68418.m06784 hypothetical protein Length = 720 Score = 31.1 bits (67), Expect = 0.81 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%) Query: 133 ELFGLDDNDDSLRKRNI--IKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNL 190 E+ LD DD + I+ + + D +S+++ ++ +K + KN+ Sbjct: 182 EIIELDHRDDEVESDGFREIREREGIPDLEPESDYNSLIRKNKKKNKKKKKK-----KNV 236 Query: 191 KEQSQIASTIIKADTEALK---KSSDLTDRNLSSLKVESERLQE 231 +E S +AS I K D EA + +D TD + + E+E E Sbjct: 237 RESSSVASEIDKRDVEANTCNGQVADETDNSNEACAQETENTPE 280 >At1g03760.1 68414.m00356 prefoldin subunit family protein contains similarity to Swiss-Prot:O94763 RNA polymerase II subunit 5-mediating protein (RPB5-mediating protein) [Homo sapiens]; contains Pfam profile PF02996: Prefoldin subunit Length = 391 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 20 EMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAA 79 E +VR+ S E E+ ++ N RL++YV+ ++I +K PD+ +++ + K A Sbjct: 16 EEDVRKAASYMEEKIGEKRVEMN-RLQQYVDENDNLINLVKKLPDQLHHNVMVPFGKMAF 74 Query: 80 FLKGVVQT 87 F ++ T Sbjct: 75 FPGRLIHT 82 >At2g43640.1 68415.m05424 signal recognition particle 14 kDa family protein / SRP14 family protein similar to SP|P16254 Signal recognition particle 14 kDa protein (SRP14) {Mus musculus}; contains Pfam profile: PF02290 signal recognition particle 14kD protein Length = 121 Score = 30.3 bits (65), Expect = 1.4 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Query: 76 KRAAFLKGVVQTATLSTPIEKLE--AVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSE 133 KR++ LK VQ LS+ E +E + + + G T+S + HQ+ A Y L++ Sbjct: 31 KRSS-LKSKVQKRKLSSVGESIEYRCLIRATDGKKTVSTSVGAKDHQRFQASYATILKAH 89 Query: 134 LFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDI 165 + L + RK++ +++TT + + Sbjct: 90 MTALKKRERKDRKKSTEAEKKESTSTTKSKKL 121 >At5g48660.1 68418.m06022 expressed protein ; expression supported by MPSS Length = 219 Score = 29.9 bits (64), Expect = 1.9 Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 4/88 (4%) Query: 151 KTPNFTSNT-TSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALK 209 K N SN +S+E+++ + K ++EK + + + + S I + KA+TE+ + Sbjct: 114 KLINLRSNVGSSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKE 173 Query: 210 KSSDL--TDRNLSSLKVES-ERLQEHSR 234 K L + ++++L+ +S E L E+ R Sbjct: 174 KEKKLETAETHVTALQKQSAELLLEYDR 201 >At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family protein similar to CoA-thioester hydrolase CHY1 (beta-hydroxyisobutyryl-CoA hydrolase) [Arabidopsis thaliana] GI:8572760; contains Pfam profile PF00378: enoyl-CoA hydratase/isomerase family protein Length = 381 Score = 29.9 bits (64), Expect = 1.9 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%) Query: 85 VQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSL 144 V T P EKL ++++ +A +S D Q+I Q T++KY SE + SL Sbjct: 188 VGLGTHYVPSEKLASLKEAIL-SANLSEDPNQDI-QATLSKYSSNPESEA-----HLKSL 240 Query: 145 RKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAE 181 I++ F+SN + +E I+ + KY Q+ + V E Sbjct: 241 LPH--IESA-FSSNKSIKETIEELKKYQQSTESSVVE 274 >At3g45680.1 68416.m04937 proton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family Length = 558 Score = 29.9 bits (64), Expect = 1.9 Identities = 15/43 (34%), Positives = 25/43 (58%) Query: 3 IEKPKLSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRL 45 +EK ++ +P KS +N L++K +L KE S++ WRL Sbjct: 269 LEKEVKTSAAMPSKSFRFLNRAALMTKDDLNQKEGSVNNIWRL 311 >At2g28620.1 68415.m03479 kinesin motor protein-related Length = 1076 Score = 29.5 bits (63), Expect = 2.5 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 17/191 (8%) Query: 49 VESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAA 108 ++SL + L D+ SE +K + L+ + + T S LE +Q H Sbjct: 636 IKSLDDIAGNLDKDSQSTLNDLNSEVTKHSCALEDMFKGFT-SEAYTLLEGLQGSLHNQE 694 Query: 109 TMSVDATQE---IHQKTV--AKYGVELRSELFG-LDDNDDSLRK----RNIIKTPNFTSN 158 TQ+ +H +++ AK + + F LD + + L K + ++ Sbjct: 695 EKLSAFTQQQRDLHSRSMDSAKSVSTVMLDFFKTLDTHANKLTKLAEDAQNVNEQKLSAF 754 Query: 159 TTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIK----ADTEALKKSSDL 214 T E+ SI + M EKVAE + KE QIA I+ + T AL++ Sbjct: 755 TKKFEE--SIANEEKQMLEKVAELLASSNARKKELVQIAVQDIRQGSSSQTGALQQEMSA 812 Query: 215 TDRNLSSLKVE 225 + SS+KV+ Sbjct: 813 MQDSASSIKVQ 823 >At2g28150.1 68415.m03419 expressed protein Length = 540 Score = 29.5 bits (63), Expect = 2.5 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 10/115 (8%) Query: 121 KTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNM-QEKV 179 K + Y + S G+ +N DS P+ + N S SIL Q + EK Sbjct: 423 KRSSSYNGDRASNQMGVAENGDS--------KPDSSKNNPSSRKASSILGKQQPLVSEKR 474 Query: 180 AENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQEHSR 234 ++ TKN+ ++ K TE+L+K + +K++ ERL +R Sbjct: 475 RDSSEDTTKNIPCTTKTHDACSKRITESLRKPDSFREDEERVIKID-ERLASGAR 528 >At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612: reticulocyte binding protein; similar to Myosin heavy chain, non-muscle (Zipper protein) (Myosin II) (SP:Q99323) {Drosophila melanogaster} similar to EST gb|T76116 Length = 1730 Score = 29.5 bits (63), Expect = 2.5 Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 2/80 (2%) Query: 159 TTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTI--IKADTEALKKSSDLTD 216 +T++++I + + ++N+Q + L K + + S +AS + + A L+ + + Sbjct: 888 STAEDNISRLTEENRNVQAAKENAELELQKAVADASSVASELDEVLATKSTLEAALMQAE 947 Query: 217 RNLSSLKVESERLQEHSRSA 236 RN+S + E E Q + +A Sbjct: 948 RNISDIISEKEEAQGRTATA 967 >At5g17890.1 68418.m02098 LIM domain-containing protein / disease resistance protein-related low similarity to disease resistance protein RPP4 [Arabidopsis thaliana] GI:20270890; contains Pfam profiles PF00412: LIM domain, PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat Length = 1613 Score = 29.1 bits (62), Expect = 3.3 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 3/98 (3%) Query: 137 LDDNDDSLRKRNIIKTPNFTSNTTSQE--DIDSILKYHQNMQEKVAENMVMLTKNLKEQS 194 +D+ D L R +T S++ Q+ S ++ N+ K + KNL+ +S Sbjct: 1054 IDEEDTPLLSRKPEETNRSRSSSELQKLSSTSSKVRSKGNVFWKWLGCFPLQPKNLRSRS 1113 Query: 195 QIASTIIKADTEALKKSSDLTD-RNLSSLKVESERLQE 231 + + + +A EALK+ L D R L +ES+++++ Sbjct: 1114 RRTTALEEALEEALKEREKLEDTRELQIALIESKKIKK 1151 >At4g32190.1 68417.m04581 centromeric protein-related low similarity to SP|Q02224 Centromeric protein E (CENP-E protein) {Homo sapiens} Length = 783 Score = 29.1 bits (62), Expect = 3.3 Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 7/140 (5%) Query: 99 AVQQLSHGAATMS-VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTS 157 A ++L T+S E Q+ + + VEL S+ +++ LR+R+ + +S Sbjct: 145 AKEELEKREKTISEASLKHESLQEELKRANVELASQAREIEELKHKLRERDEERAALQSS 204 Query: 158 NTTSQEDIDSILKYHQNMQEKVA------ENMVMLTKNLKEQSQIASTIIKADTEALKKS 211 T +E+++ + + N ++V+ E+ L E + I A AL++ Sbjct: 205 LTLKEEELEKMRQEIANRSKEVSMAISEFESKSQLLSKANEVVKRQEGEIYALQRALEEK 264 Query: 212 SDLTDRNLSSLKVESERLQE 231 + + + ++ K+E E+L+E Sbjct: 265 EEELEISKATKKLEQEKLRE 284 >At3g52300.1 68416.m05748 ATP synthase D chain-related contains weak similarity to ATP synthase D chain, mitochondrial (EC 3.6.3.14) (Swiss-Prot:P31399) [Rattus norvegicus] Length = 168 Score = 29.1 bits (62), Expect = 3.3 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 4/92 (4%) Query: 47 KYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATL-STPIEK-LEAVQQLS 104 KY E+ S+ E+ DK + + ++ LK Q + S +EK + VQ++S Sbjct: 78 KYKEAYDSI--EIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKESERLEKEIADVQEIS 135 Query: 105 HGAATMSVDATQEIHQKTVAKYGVELRSELFG 136 +TM+ D E H + K+ E+R++ +G Sbjct: 136 KKLSTMTADEYFEKHPELKKKFDDEIRNDNWG 167 >At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc dependent protease VAR2 GI:7650138 from [Arabidopsis thaliana] Length = 695 Score = 29.1 bits (62), Expect = 3.3 Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 158 NTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQS-QIASTIIKADTEALKK 210 ++++Q D+ + +M EK+AE++ K L + + +IA + IK + EA+ K Sbjct: 593 DSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDK 646 >At2g29040.1 68415.m03530 exostosin family protein contains Pfam profile: PF03016 exostosin family Length = 720 Score = 29.1 bits (62), Expect = 3.3 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Query: 124 AKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILK 170 AK VE + L +DDNDD L + + PN +S+ ++D D L+ Sbjct: 186 AKKDVEPKKAL--VDDNDDDLETKRGKELPNDSSSNVVEDDNDDDLE 230 >At2g22795.1 68415.m02704 expressed protein Length = 734 Score = 29.1 bits (62), Expect = 3.3 Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 15/204 (7%) Query: 29 KCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTA 88 K E ++EE++D K+ VES S E DK ++ I S + + + + Sbjct: 457 KEESSSQEETMDKETEAKEKVESSSQEKNE-----DKETEKIESSFLEETKEKEDETKEK 511 Query: 89 TLSTPIEKLEAVQ-QLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKR 147 S+ EK E + + + S + T++ + + K + E +N+ ++ Sbjct: 512 EESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEES---KENETETKE- 567 Query: 148 NIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEA 207 K + + T +++ + I K QE+ E K KE+S + +TE Sbjct: 568 ---KEESSSQEETKEKENEKIEKEESAPQEETKEKEN--EKIEKEESASQEETKEKETET 622 Query: 208 LKKSSDLTDRNLSSLKVESERLQE 231 +K ++ + ++ ESE+ ++ Sbjct: 623 KEKEESSSNESQENVNTESEKKEQ 646 >At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative similar to GI:11322965; Except for first 55 amino acids, 52% identical to Prenyl transferase (Cyanophora paradoxa) (gi 99282). Location of est 120E9T7 (gb|T43950) Length = 417 Score = 29.1 bits (62), Expect = 3.3 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 10/105 (9%) Query: 121 KTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVA 180 K A ++ S LF D D ++ KT + + +T I S ++ KVA Sbjct: 238 KDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFS------KVESKVA 291 Query: 181 ENMVMLTKNLKEQSQIASTII--KADTEALKK--SSDLTDRNLSS 221 E M KNL Q+ I+ TE L K ++DL N+++ Sbjct: 292 EQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITA 336 >At5g38840.1 68418.m04698 forkhead-associated domain-containing protein / FHA domain-containing protein related to adaptor protein kanadaptin [Homo sapiens] gi|13562130|gb|AAK29177 Length = 735 Score = 28.7 bits (61), Expect = 4.3 Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 94 IEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTP 153 +E+LE +++ + + S+ A K G+ E D++D R + T Sbjct: 330 LEELENLEETLNDSIRESLGAKTGRKPTHGKKKGIVEDEEDLSSDEDDFYDRTQKKPSTK 389 Query: 154 NFTSNTTSQEDIDSILKYHQNMQEKV-AENMVMLTKNLKEQSQIASTIIKADT 205 + N T E +DS++ N+ +++ A+N +LT+ K +++ + + D+ Sbjct: 390 KGSENQTV-ETVDSLVDKRDNVLKEIEAKNEQLLTEKSKMETENVTEVTSGDS 441 >At5g28800.1 68418.m03541 hypothetical protein predicted protein, Arabidopsis thaliana Length = 118 Score = 28.7 bits (61), Expect = 4.3 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Query: 175 MQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVE 225 M+EK+ + M+ +TK K+++ I ++KA SS + DRN S +E Sbjct: 1 MEEKMRKKMMKMTKKRKKKNIIKKRMVKA---LHVSSSPIFDRNSSKPVIE 48 >At5g23880.1 68418.m02805 cleavage and polyadenylation specificity factor identical to cleavage and polyadenylation specificity factor [Arabidopsis thaliana] SWISS-PROT:Q9LKF9 Length = 739 Score = 28.7 bits (61), Expect = 4.3 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Query: 8 LSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPS 67 L + P PK ++ M+ R L+ ELIA EE + RLK+ +S++ E +T S Sbjct: 366 LQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQN---RLKREEALRASLVKEEETKASHGS 422 Query: 68 KDILSE 73 D SE Sbjct: 423 DDNSSE 428 >At4g30993.2 68417.m04400 expressed protein Length = 285 Score = 28.7 bits (61), Expect = 4.3 Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 234 RSAWKCWLWIMLAVVMVIFISKCSAYLDFFA 264 +S+W C ++I L++ ++I++S S + FF+ Sbjct: 3 QSSWGCTIFIQLSLCLIIYVSLHSGHPFFFS 33 >At4g30993.1 68417.m04399 expressed protein Length = 209 Score = 28.7 bits (61), Expect = 4.3 Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 234 RSAWKCWLWIMLAVVMVIFISKCSAYLDFFA 264 +S+W C ++I L++ ++I++S S + FF+ Sbjct: 3 QSSWGCTIFIQLSLCLIIYVSLHSGHPFFFS 33 >At3g62940.2 68416.m07071 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease Length = 332 Score = 28.7 bits (61), Expect = 4.3 Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 7/123 (5%) Query: 112 VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKY 171 +DA+QE +TV + R E+ L + + ++K K ++ D I K Sbjct: 17 MDASQEQQHETVEEMLARHRQEIKQLQNKETEMKKA-AAKGSKAEQKAKKKQVEDDISKL 75 Query: 172 HQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE 231 +++K + + ++ S ++ I K +T K D R ++ + V ++ QE Sbjct: 76 STKLKDKQLKELA--SQGFSSSS--SNNIAKDETTEKKGDIDTLVRAIAGVSVTAQ--QE 129 Query: 232 HSR 234 HS+ Sbjct: 130 HSK 132 >At3g62940.1 68416.m07070 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease Length = 316 Score = 28.7 bits (61), Expect = 4.3 Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 7/123 (5%) Query: 112 VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKY 171 +DA+QE +TV + R E+ L + + ++K K ++ D I K Sbjct: 1 MDASQEQQHETVEEMLARHRQEIKQLQNKETEMKKA-AAKGSKAEQKAKKKQVEDDISKL 59 Query: 172 HQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE 231 +++K + + ++ S ++ I K +T K D R ++ + V ++ QE Sbjct: 60 STKLKDKQLKELA--SQGFSSSS--SNNIAKDETTEKKGDIDTLVRAIAGVSVTAQ--QE 113 Query: 232 HSR 234 HS+ Sbjct: 114 HSK 116 >At3g27350.1 68416.m03420 expressed protein Length = 274 Score = 28.7 bits (61), Expect = 4.3 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 123 VAKYGVELRSE-LFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAE 181 V KYG E R F +DD+D + N++ ++ ++ + +LK ++ EK + Sbjct: 121 VLKYGEEGRERNSFQIDDHDVTDELENVMFGGDYVKEEEEKKVEEELLKEDWSVGEKEKQ 180 Query: 182 NMVMLTKN 189 + +TKN Sbjct: 181 HRKSVTKN 188 >At1g68670.1 68414.m07846 myb family transcription factor contains Pfam domain, PF00249: Myb-like DNA-binding domain Length = 354 Score = 28.7 bits (61), Expect = 4.3 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 173 QNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQEH 232 Q Q++V E L +K S + +T + TE SDL ++E ++ Q H Sbjct: 154 QPFQKRVLETD--LQPAVKVASSMPATTTSSTTETCGGKSDLIKAGDEERRIEQQQSQSH 211 Query: 233 S-RSAWKCW 240 + R +CW Sbjct: 212 THRKQRRCW 220 >At5g32605.1 68418.m03879 hypothetical protein Length = 365 Score = 28.3 bits (60), Expect = 5.7 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Query: 176 QEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESE 227 Q KV EN V KN+ +QS+I +++ + ++ +K +L DR L K E Sbjct: 264 QGKVEENQV---KNIDDQSKIWASLRRVTMDSSRKYVELLDRILDLDKKSKE 312 >At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. A false intron was added between exons 2 and 3 to circumvent a frameshift caused by a sequencing error, as per Blake Meyers (bcmeyers@vegmail.ucdavis.edu) Length = 1308 Score = 28.3 bits (60), Expect = 5.7 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 4/125 (3%) Query: 132 SELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLK 191 SE FG+ ++ R + + + T +++ + H N+ + ++K L Sbjct: 544 SEAFGIKPEENPFRSQAVTSYLKAARDMTREKECILVFSCHDNLDVDETSFIEAISKELH 603 Query: 192 EQSQIASTIIKADTEALKK----SSDLTDRNLSSLKVESERLQEHSRSAWKCWLWIMLAV 247 +Q I T E L + S + LSS V S + +H + + W L + Sbjct: 604 KQGFIPLTYNLLGRENLDEEMLYGSRVGIMILSSSYVSSRQSLDHLVAVMEHWKTTDLVI 663 Query: 248 VMVIF 252 + + F Sbjct: 664 IPIYF 668 >At3g12060.1 68416.m01500 expressed protein similar to hypothetical protein GB:CAB82953 GI:7340710 from [Arabidopsis thaliana] Length = 556 Score = 28.3 bits (60), Expect = 5.7 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 153 PNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIA--STIIKADTEALKK 210 PN T + +S S+ ++ EN+ +TKNL +S +A +T A T ++ Sbjct: 75 PNITVSNSSNSSPSSLDSNFTTLRTPAPENLTAVTKNLTFESPVANGTTDTNAKTITIQF 134 Query: 211 SSDLTDRNLS 220 + N+S Sbjct: 135 QTGHAKENIS 144 >At2g47470.1 68415.m05925 thioredoxin family protein similar to protein disulfide isomerase [Dictyostelium discoideum] GI:2627440; contains Pfam profile: PF00085 Thioredoxin Length = 361 Score = 28.3 bits (60), Expect = 5.7 Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 49 VESLSSMITELKTGPDKPSKDILSEYSKRAAFLKG 83 VESL +++ EL + K +LS + A+ LKG Sbjct: 266 VESLDALVKELVAASEDEKKAVLSRIEEEASTLKG 300 >At2g25680.1 68415.m03078 expressed protein ; expression supported by MPSS Length = 456 Score = 28.3 bits (60), Expect = 5.7 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 54 SMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSH 105 S++ ++K GP K +S + R FLKG V LS + + AV +LS+ Sbjct: 249 SIVHDIKFGPSKMKIVRISRKAWRNGFLKGTVPQLPLSV-LNSVVAVCKLSY 299 >At2g06140.1 68415.m00675 hypothetical protein Length = 633 Score = 28.3 bits (60), Expect = 5.7 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Query: 176 QEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNL 219 Q +V EN V KN+ +QS+I +++ K E+ +K+ + DR L Sbjct: 554 QGEVEENQV---KNVDDQSKIRASLTKVTIESSRKNVESLDRIL 594 >At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:719291) [Arabidopsis thaliana] Length = 2603 Score = 28.3 bits (60), Expect = 5.7 Identities = 15/57 (26%), Positives = 27/57 (47%) Query: 140 NDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQI 196 NDDS++K N+I + T + + S +N+ E +A +V+ + S I Sbjct: 2282 NDDSVQKSNVICLRSSTGASAQELRRTSSFDREENVAEPIANELVLQAHSCNVSSSI 2338 >At5g13460.1 68418.m01549 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif Length = 443 Score = 27.9 bits (59), Expect = 7.6 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 11/80 (13%) Query: 166 DSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVE 225 D+ILK N Q++ +++ LTK KE ++ + EA + + + ++ K Sbjct: 192 DNILKVDTNGQKRWDDSL--LTKEEKE------AVVMSKKEASLRRERIKEYAVTHRK-S 242 Query: 226 SERLQEHSRSAWKCWL--WI 243 +E Q+ S + WK WL W+ Sbjct: 243 AESYQKRSNTKWKYWLDEWV 262 >At5g01840.1 68418.m00103 ovate family protein 59% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 Length = 270 Score = 27.9 bits (59), Expect = 7.6 Identities = 11/36 (30%), Positives = 21/36 (58%) Query: 157 SNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKE 192 S + +D + ++M+E +AEN + TK+L+E Sbjct: 199 SRAVVKASVDPKRDFKESMEEMIAENKIRATKDLEE 234 >At4g24950.1 68417.m03574 hypothetical protein Length = 157 Score = 27.9 bits (59), Expect = 7.6 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 130 LRSELFGLDDNDDSLRKRNIIKTPN-FTSNTTSQEDIDSILKYHQNMQEKVAENMVML 186 LR +LF D+DD +K ++ + ++SN TS D K ++ V+ MV+L Sbjct: 74 LRRKLFHDSDDDDQTKKTTLLSHSSCWSSNVTSSSDTTK-AKKKTTIRRFVSVTMVLL 130 >At3g13870.2 68416.m01752 root hair defective 3 (RHD3) identical to root hair defective 3 (RHD3) GI:1839188 from [Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811) Length = 738 Score = 27.9 bits (59), Expect = 7.6 Identities = 15/51 (29%), Positives = 24/51 (47%) Query: 137 LDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLT 187 LDD D++ K + N T N + + I +I + EKVA ++T Sbjct: 527 LDDELDNIEKTLTLALFNSTGNNATSKSISTIDSLASSTWEKVAPEKTLIT 577 >At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical to root hair defective 3 (RHD3) GI:1839188 from [Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811) Length = 802 Score = 27.9 bits (59), Expect = 7.6 Identities = 15/51 (29%), Positives = 24/51 (47%) Query: 137 LDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLT 187 LDD D++ K + N T N + + I +I + EKVA ++T Sbjct: 591 LDDELDNIEKTLTLALFNSTGNNATSKSISTIDSLASSTWEKVAPEKTLIT 641 >At3g05900.1 68416.m00664 neurofilament protein-related similar to NF-180 (GI:632549) [Petromyzon marinus] similar to Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H) (Swiss-Prot:P12036) [Homo sapiens] Length = 673 Score = 27.9 bits (59), Expect = 7.6 Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 15/169 (8%) Query: 52 LSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMS 111 + ITE K D+PSKD + S A + V T K E + +S A + Sbjct: 403 IEKAITEEKYVVDEPSKDETTSESGSALCPEKAVPTNQDLDTEPKKETEEDVSSPADIIE 462 Query: 112 VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKY 171 T+E K+ VE S+ ++ +L ++ T N S+T +++ + + Sbjct: 463 KAITEE-------KHVVEEPSKDEKTSESGSALSPEKVVPT-NQDSDTEPKKETEGDVPS 514 Query: 172 HQNMQEK-VAENMVMLTKNLKEQSQIAS------TIIKADTEALKKSSD 213 ++ EK + + ++ + LK++ + S T + A+ E +KK +D Sbjct: 515 PADVIEKAITDEKHVVEEPLKDEQENVSEAKDVVTKLAAEDENIKKDTD 563 >At3g05380.1 68416.m00588 myb family transcription factor contains Pfam profile:PF00249 Myb-like DNA-binding domain Length = 1055 Score = 27.9 bits (59), Expect = 7.6 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 13 VPKKSRLEMNV-RQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTG 62 +P+ +RLE +V + L + ++ + +LK+Y ES+ TEL+TG Sbjct: 665 IPRLTRLEWSVIKSSLGRPRRFSERFLHEEREKLKQYRESVRKHYTELRTG 715 >At1g77500.1 68414.m09025 expressed protein contains Pfam domains, PF04782: Protein of unknown function (DUF632) and PF04783: Protein of unknown function (DUF630) Length = 879 Score = 27.9 bits (59), Expect = 7.6 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Query: 95 EKLEAVQQL-SHGAATMSVDATQEIHQKTVAKYGVELRS 132 EK ++++ SHGA ++ +DAT+ +K + K V +RS Sbjct: 572 EKCRRLKKMDSHGAESIKIDATRAAIRKLLTKIDVCIRS 610 >At1g03830.1 68414.m00364 guanylate-binding family protein contains Pfam domains PF02263: Guanylate-binding protein, N-terminal domain and PF02841: Guanylate-binding protein, C-terminal domain Length = 991 Score = 27.9 bits (59), Expect = 7.6 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%) Query: 107 AATMSVDATQE-IHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSN--TTSQE 163 A T + A +E + Q + + G LR+E + D + + K +T E Sbjct: 535 AVTEKIAAMEEKLKQASTTEDG--LRAEFSRVLDEKEKIITEKAAKLATLEQQLASTRAE 592 Query: 164 DIDSILKYHQNMQEKVAENMVMLTKNLKEQS-QIASTIIKADTEALKKSSDLTDRNLSSL 222 S LK + E + M N K +S + AS +++ +TE LK+ D D+ Sbjct: 593 LKKSALKVDECSSEAKDVRLQMSLLNEKYESVKSASELLETETETLKREKDELDKKCHIH 652 Query: 223 KVESERL 229 E E+L Sbjct: 653 LEELEKL 659 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.313 0.126 0.345 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,557,491 Number of Sequences: 28952 Number of extensions: 205363 Number of successful extensions: 814 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 35 Number of HSP's that attempted gapping in prelim test: 796 Number of HSP's gapped (non-prelim): 54 length of query: 269 length of database: 12,070,560 effective HSP length: 80 effective length of query: 189 effective length of database: 9,754,400 effective search space: 1843581600 effective search space used: 1843581600 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits) S2: 59 (27.9 bits)
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