SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001916-TA|BGIBMGA001916-PA|undefined
         (269 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g55600.1 68416.m06175 expressed protein predicted proteins, A...    49   3e-06
At1g54110.1 68414.m06168 cation exchanger, putative (CAX10) Ca2+...    42   6e-04
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /...    36   0.029
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '...    33   0.27 
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '...    33   0.27 
At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) iden...    31   0.62 
At4g36550.1 68417.m05190 U-box domain-containing protein low sim...    31   0.62 
At5g54480.1 68418.m06784 hypothetical protein                          31   0.81 
At1g03760.1 68414.m00356 prefoldin subunit family protein contai...    31   1.1  
At2g43640.1 68415.m05424 signal recognition particle 14 kDa fami...    30   1.4  
At5g48660.1 68418.m06022 expressed protein ; expression supporte...    30   1.9  
At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family pr...    30   1.9  
At3g45680.1 68416.m04937 proton-dependent oligopeptide transport...    30   1.9  
At2g28620.1 68415.m03479 kinesin motor protein-related                 29   2.5  
At2g28150.1 68415.m03419 expressed protein                             29   2.5  
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016...    29   2.5  
At5g17890.1 68418.m02098 LIM domain-containing protein / disease...    29   3.3  
At4g32190.1 68417.m04581 centromeric protein-related low similar...    29   3.3  
At3g52300.1 68416.m05748 ATP synthase D chain-related contains w...    29   3.3  
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ...    29   3.3  
At2g29040.1 68415.m03530 exostosin family protein contains Pfam ...    29   3.3  
At2g22795.1 68415.m02704 expressed protein                             29   3.3  
At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative ...    29   3.3  
At5g38840.1 68418.m04698 forkhead-associated domain-containing p...    29   4.3  
At5g28800.1 68418.m03541 hypothetical protein predicted protein,...    29   4.3  
At5g23880.1 68418.m02805 cleavage and polyadenylation specificit...    29   4.3  
At4g30993.2 68417.m04400 expressed protein                             29   4.3  
At4g30993.1 68417.m04399 expressed protein                             29   4.3  
At3g62940.2 68416.m07071 OTU-like cysteine protease family prote...    29   4.3  
At3g62940.1 68416.m07070 OTU-like cysteine protease family prote...    29   4.3  
At3g27350.1 68416.m03420 expressed protein                             29   4.3  
At1g68670.1 68414.m07846 myb family transcription factor contain...    29   4.3  
At5g32605.1 68418.m03879 hypothetical protein                          28   5.7  
At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR...    28   5.7  
At3g12060.1 68416.m01500 expressed protein similar to hypothetic...    28   5.7  
At2g47470.1 68415.m05925 thioredoxin family protein similar to p...    28   5.7  
At2g25680.1 68415.m03078 expressed protein ; expression supporte...    28   5.7  
At2g06140.1 68415.m00675 hypothetical protein                          28   5.7  
At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:71...    28   5.7  
At5g13460.1 68418.m01549 calmodulin-binding family protein low s...    28   7.6  
At5g01840.1 68418.m00103 ovate family protein 59% similar to ova...    28   7.6  
At4g24950.1 68417.m03574 hypothetical protein                          28   7.6  
At3g13870.2 68416.m01752 root hair defective 3 (RHD3) identical ...    28   7.6  
At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical ...    28   7.6  
At3g05900.1 68416.m00664 neurofilament protein-related similar t...    28   7.6  
At3g05380.1 68416.m00588 myb family transcription factor contain...    28   7.6  
At1g77500.1 68414.m09025 expressed protein contains Pfam domains...    28   7.6  
At1g03830.1 68414.m00364 guanylate-binding family protein contai...    28   7.6  

>At3g55600.1 68416.m06175 expressed protein predicted proteins,
           Arabidopsis thaliana
          Length = 240

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 50/244 (20%), Positives = 111/244 (45%), Gaps = 24/244 (9%)

Query: 17  SRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITEL---KT--GPDKPSKDIL 71
           S+ E+N+R+LLS       +       +L  YV +L   + +L   KT  G  + +K  +
Sbjct: 5   SKTEINLRRLLSAAPNQQNQS------KLMHYVATLREQLEQLSEEKTPEGLPRVTKAKV 58

Query: 72  SEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELR 131
           +EY ++   +   + +    T +      +  + G++        +I  +  +    +LR
Sbjct: 59  NEYYEKIEAVASKIASQEPETEVSDEPFAKDSTSGSSP-------KIEDEPRSPTSPQLR 111

Query: 132 SELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLK 191
             +      + S    +   +     +T +Q  ID     H+ +QE + + MV+L + LK
Sbjct: 112 RRIVPASSKEQSFDAADADSSKPIKLDTAAQAHIDK----HRKLQEDLTDEMVVLARQLK 167

Query: 192 EQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE-HSRSA-WKCWLWIMLAVVM 249
           E+SQ  S  ++   + L  + +  +++L+S    + R  + +S+S+   C+ W+++  ++
Sbjct: 168 ERSQAISQSVQNTEKILDSTEEAIEQSLASTGHATTRATKIYSQSSKTSCFQWLLIFAMI 227

Query: 250 VIFI 253
            +FI
Sbjct: 228 CVFI 231


>At1g54110.1 68414.m06168 cation exchanger, putative (CAX10)
           Ca2+:Cation Antiporter (CaCA) Family member
           PMID:11500563
          Length = 236

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 173 QNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSS---LKVESERL 229
           + +QE + + MV+L + LKE+SQ+ S  ++   + L  + +  +++L+S     V + ++
Sbjct: 145 RKLQEDLTDEMVVLARQLKERSQMISQSVQNTEKILDSTEEAIEQSLASTGHATVRATKI 204

Query: 230 QEHSRSAWKCWLWIMLAVVMVIFI 253
              S S   C+ W+++  +  +FI
Sbjct: 205 YSES-SKTSCFQWLLILAMTCVFI 227


>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
           phosphoglyceride transfer family protein contains Pfam
           PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
           CRAL/TRIO, N-terminus; similar to cytosolic factor
           (Phosphatidylinositol/phosphatidylcholine transfer
           protein) (PI/PCTP) (SP:P24280) [Saccharomyces
           cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
           come from this gene
          Length = 540

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 11/193 (5%)

Query: 4   EKPKLSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGP 63
           EK  LS +    +  +  N      K E    +E  +   + +  VE       E K   
Sbjct: 68  EKKALSDLKSKLEEAIVDNTLLKTKKKESSPMKEKKEEVVKPEAEVEKKKEEAAEEKVEE 127

Query: 64  DKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 123
           +K S+ +++E + +A  ++ VV    +  P E++  V +          + T+E  +KT 
Sbjct: 128 EKKSEAVVTEEAPKAETVEAVVTEEII--PKEEVTTVVEKVE-------EETKEEEKKTE 178

Query: 124 AKYGVELRSELFGLDDNDDSLRKR-NIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAEN 182
                E+++E   ++D D+S+ K   +   P   S      D+  +LK+ +    KV E 
Sbjct: 179 DVVTEEVKAETIEVEDEDESVDKDIELWGVPLLPSKGAESTDV-ILLKFLRARDFKVNEA 237

Query: 183 MVMLTKNLKEQSQ 195
             ML K LK + Q
Sbjct: 238 FEMLKKTLKWRKQ 250


>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
           'Morpheus molecule') [Arabidopsis thaliana]
           gi|8132770|gb|AAF73381.1|
          Length = 2001

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 57  TELKTGPDKPSKDILSEYSKRAAFLKGVVQT---ATLSTPIEKLEAVQQLSHGAATMSVD 113
           T L  G D P K + +E  K       +V+T   + + +P E LE  Q+L  G    S  
Sbjct: 198 TSLDKGTDFPLKSV-TETEKIVLDASPIVETGDDSVIGSPSENLET-QKLQDGKTDCSPP 255

Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILK 170
           A  E     V +  +E        DDN D L   N          T+ ++D D  LK
Sbjct: 256 ANAESKTLPVGETSLEKEYPQKFQDDNTDCLPPANAESKRLPVGETSLEKDTDFPLK 312


>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
           'Morpheus molecule') [Arabidopsis thaliana]
           gi|8132770|gb|AAF73381.1|
          Length = 2001

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 57  TELKTGPDKPSKDILSEYSKRAAFLKGVVQT---ATLSTPIEKLEAVQQLSHGAATMSVD 113
           T L  G D P K + +E  K       +V+T   + + +P E LE  Q+L  G    S  
Sbjct: 198 TSLDKGTDFPLKSV-TETEKIVLDASPIVETGDDSVIGSPSENLET-QKLQDGKTDCSPP 255

Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILK 170
           A  E     V +  +E        DDN D L   N          T+ ++D D  LK
Sbjct: 256 ANAESKTLPVGETSLEKEYPQKFQDDNTDCLPPANAESKRLPVGETSLEKDTDFPLK 312


>At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1)
           identical to peroxisomal ABC transporter PXA1
           GI:15320529 from [Arabidopsis thaliana]; contains Pfam
           profile PF00005: ABC transporter;
          Length = 1337

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 38  SIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLST 92
           SID + RL + +E L++ ++ L TG  KPS DIL  ++ R   L G    A L T
Sbjct: 859 SIDADQRLTRDLEKLTADLSGLLTGMVKPSVDIL-WFTWRMKLLTGQRGVAILYT 912


>At4g36550.1 68417.m05190 U-box domain-containing protein low
           similarity to immediate-early fungal elicitor protein
           CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
           profile PF04564: U-box domain
          Length = 577

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 5/92 (5%)

Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKT-PNFTSNTTSQEDIDSILKYH 172
           A + + ++    + V L SE+      +++L    ++   P+  S  TS   + S+LK  
Sbjct: 316 AIESLEEEVFKMFSVFLESEVVA----EEALNILEVLSNHPHGPSKITSSGSLSSLLKIV 371

Query: 173 QNMQEKVAENMVMLTKNLKEQSQIASTIIKAD 204
           ++  E + E  ++  KNL    +I   ++  D
Sbjct: 372 ESQAEHLQEQAMITLKNLSSSMEICLEMVSLD 403


>At5g54480.1 68418.m06784 hypothetical protein 
          Length = 720

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)

Query: 133 ELFGLDDNDDSLRKRNI--IKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNL 190
           E+  LD  DD +       I+      +   + D +S+++ ++   +K  +      KN+
Sbjct: 182 EIIELDHRDDEVESDGFREIREREGIPDLEPESDYNSLIRKNKKKNKKKKKK-----KNV 236

Query: 191 KEQSQIASTIIKADTEALK---KSSDLTDRNLSSLKVESERLQE 231
           +E S +AS I K D EA     + +D TD +  +   E+E   E
Sbjct: 237 RESSSVASEIDKRDVEANTCNGQVADETDNSNEACAQETENTPE 280


>At1g03760.1 68414.m00356 prefoldin subunit family protein
          contains similarity to Swiss-Prot:O94763 RNA polymerase
          II subunit 5-mediating protein (RPB5-mediating protein)
          [Homo sapiens]; contains Pfam profile PF02996:
          Prefoldin subunit
          Length = 391

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 20 EMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAA 79
          E +VR+  S  E    E+ ++ N RL++YV+   ++I  +K  PD+   +++  + K A 
Sbjct: 16 EEDVRKAASYMEEKIGEKRVEMN-RLQQYVDENDNLINLVKKLPDQLHHNVMVPFGKMAF 74

Query: 80 FLKGVVQT 87
          F   ++ T
Sbjct: 75 FPGRLIHT 82


>At2g43640.1 68415.m05424 signal recognition particle 14 kDa family
           protein / SRP14 family protein similar to SP|P16254
           Signal recognition particle 14 kDa protein (SRP14) {Mus
           musculus}; contains Pfam profile: PF02290 signal
           recognition particle 14kD protein
          Length = 121

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 76  KRAAFLKGVVQTATLSTPIEKLE--AVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSE 133
           KR++ LK  VQ   LS+  E +E   + + + G  T+S     + HQ+  A Y   L++ 
Sbjct: 31  KRSS-LKSKVQKRKLSSVGESIEYRCLIRATDGKKTVSTSVGAKDHQRFQASYATILKAH 89

Query: 134 LFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDI 165
           +  L   +   RK++       +++TT  + +
Sbjct: 90  MTALKKRERKDRKKSTEAEKKESTSTTKSKKL 121


>At5g48660.1 68418.m06022 expressed protein ; expression supported
           by MPSS
          Length = 219

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 151 KTPNFTSNT-TSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALK 209
           K  N  SN  +S+E+++ + K    ++EK  +    + +   + S I   + KA+TE+ +
Sbjct: 114 KLINLRSNVGSSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKE 173

Query: 210 KSSDL--TDRNLSSLKVES-ERLQEHSR 234
           K   L   + ++++L+ +S E L E+ R
Sbjct: 174 KEKKLETAETHVTALQKQSAELLLEYDR 201


>At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family
           protein similar to CoA-thioester hydrolase CHY1
           (beta-hydroxyisobutyryl-CoA hydrolase) [Arabidopsis
           thaliana] GI:8572760; contains Pfam profile PF00378:
           enoyl-CoA hydratase/isomerase family protein
          Length = 381

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)

Query: 85  VQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSL 144
           V   T   P EKL ++++    +A +S D  Q+I Q T++KY     SE      +  SL
Sbjct: 188 VGLGTHYVPSEKLASLKEAIL-SANLSEDPNQDI-QATLSKYSSNPESEA-----HLKSL 240

Query: 145 RKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAE 181
                I++  F+SN + +E I+ + KY Q+ +  V E
Sbjct: 241 LPH--IESA-FSSNKSIKETIEELKKYQQSTESSVVE 274


>At3g45680.1 68416.m04937 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 558

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 3   IEKPKLSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRL 45
           +EK   ++  +P KS   +N   L++K +L  KE S++  WRL
Sbjct: 269 LEKEVKTSAAMPSKSFRFLNRAALMTKDDLNQKEGSVNNIWRL 311


>At2g28620.1 68415.m03479 kinesin motor protein-related 
          Length = 1076

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 17/191 (8%)

Query: 49  VESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAA 108
           ++SL  +   L         D+ SE +K +  L+ + +  T S     LE +Q   H   
Sbjct: 636 IKSLDDIAGNLDKDSQSTLNDLNSEVTKHSCALEDMFKGFT-SEAYTLLEGLQGSLHNQE 694

Query: 109 TMSVDATQE---IHQKTV--AKYGVELRSELFG-LDDNDDSLRK----RNIIKTPNFTSN 158
                 TQ+   +H +++  AK    +  + F  LD + + L K       +     ++ 
Sbjct: 695 EKLSAFTQQQRDLHSRSMDSAKSVSTVMLDFFKTLDTHANKLTKLAEDAQNVNEQKLSAF 754

Query: 159 TTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIK----ADTEALKKSSDL 214
           T   E+  SI    + M EKVAE +       KE  QIA   I+    + T AL++    
Sbjct: 755 TKKFEE--SIANEEKQMLEKVAELLASSNARKKELVQIAVQDIRQGSSSQTGALQQEMSA 812

Query: 215 TDRNLSSLKVE 225
              + SS+KV+
Sbjct: 813 MQDSASSIKVQ 823


>At2g28150.1 68415.m03419 expressed protein
          Length = 540

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 10/115 (8%)

Query: 121 KTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNM-QEKV 179
           K  + Y  +  S   G+ +N DS         P+ + N  S     SIL   Q +  EK 
Sbjct: 423 KRSSSYNGDRASNQMGVAENGDS--------KPDSSKNNPSSRKASSILGKQQPLVSEKR 474

Query: 180 AENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQEHSR 234
            ++    TKN+   ++      K  TE+L+K     +     +K++ ERL   +R
Sbjct: 475 RDSSEDTTKNIPCTTKTHDACSKRITESLRKPDSFREDEERVIKID-ERLASGAR 528


>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
           reticulocyte binding protein; similar to  Myosin heavy
           chain, non-muscle (Zipper protein) (Myosin II)
           (SP:Q99323) {Drosophila melanogaster} similar to EST
           gb|T76116
          Length = 1730

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 159 TTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTI--IKADTEALKKSSDLTD 216
           +T++++I  + + ++N+Q       + L K + + S +AS +  + A    L+ +    +
Sbjct: 888 STAEDNISRLTEENRNVQAAKENAELELQKAVADASSVASELDEVLATKSTLEAALMQAE 947

Query: 217 RNLSSLKVESERLQEHSRSA 236
           RN+S +  E E  Q  + +A
Sbjct: 948 RNISDIISEKEEAQGRTATA 967


>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
            resistance protein-related low similarity to disease
            resistance protein RPP4 [Arabidopsis thaliana]
            GI:20270890; contains Pfam profiles PF00412: LIM domain,
            PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
          Length = 1613

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 137  LDDNDDSLRKRNIIKTPNFTSNTTSQE--DIDSILKYHQNMQEKVAENMVMLTKNLKEQS 194
            +D+ D  L  R   +T    S++  Q+     S ++   N+  K      +  KNL+ +S
Sbjct: 1054 IDEEDTPLLSRKPEETNRSRSSSELQKLSSTSSKVRSKGNVFWKWLGCFPLQPKNLRSRS 1113

Query: 195  QIASTIIKADTEALKKSSDLTD-RNLSSLKVESERLQE 231
            +  + + +A  EALK+   L D R L    +ES+++++
Sbjct: 1114 RRTTALEEALEEALKEREKLEDTRELQIALIESKKIKK 1151


>At4g32190.1 68417.m04581 centromeric protein-related low similarity
           to SP|Q02224 Centromeric protein E (CENP-E protein)
           {Homo sapiens}
          Length = 783

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 7/140 (5%)

Query: 99  AVQQLSHGAATMS-VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTS 157
           A ++L     T+S      E  Q+ + +  VEL S+   +++    LR+R+  +    +S
Sbjct: 145 AKEELEKREKTISEASLKHESLQEELKRANVELASQAREIEELKHKLRERDEERAALQSS 204

Query: 158 NTTSQEDIDSILKYHQNMQEKVA------ENMVMLTKNLKEQSQIASTIIKADTEALKKS 211
            T  +E+++ + +   N  ++V+      E+   L     E  +     I A   AL++ 
Sbjct: 205 LTLKEEELEKMRQEIANRSKEVSMAISEFESKSQLLSKANEVVKRQEGEIYALQRALEEK 264

Query: 212 SDLTDRNLSSLKVESERLQE 231
            +  + + ++ K+E E+L+E
Sbjct: 265 EEELEISKATKKLEQEKLRE 284


>At3g52300.1 68416.m05748 ATP synthase D chain-related contains weak
           similarity to ATP synthase D chain, mitochondrial (EC
           3.6.3.14) (Swiss-Prot:P31399) [Rattus norvegicus]
          Length = 168

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 47  KYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATL-STPIEK-LEAVQQLS 104
           KY E+  S+  E+    DK + +   ++      LK   Q +   S  +EK +  VQ++S
Sbjct: 78  KYKEAYDSI--EIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKESERLEKEIADVQEIS 135

Query: 105 HGAATMSVDATQEIHQKTVAKYGVELRSELFG 136
              +TM+ D   E H +   K+  E+R++ +G
Sbjct: 136 KKLSTMTADEYFEKHPELKKKFDDEIRNDNWG 167


>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
           dependent protease VAR2 GI:7650138 from [Arabidopsis
           thaliana]
          Length = 695

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 158 NTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQS-QIASTIIKADTEALKK 210
           ++++Q D+   +    +M EK+AE++    K L + + +IA + IK + EA+ K
Sbjct: 593 DSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDK 646


>At2g29040.1 68415.m03530 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 720

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 124 AKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILK 170
           AK  VE +  L  +DDNDD L  +   + PN +S+   ++D D  L+
Sbjct: 186 AKKDVEPKKAL--VDDNDDDLETKRGKELPNDSSSNVVEDDNDDDLE 230


>At2g22795.1 68415.m02704 expressed protein
          Length = 734

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 15/204 (7%)

Query: 29  KCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTA 88
           K E  ++EE++D     K+ VES S    E     DK ++ I S + +     +   +  
Sbjct: 457 KEESSSQEETMDKETEAKEKVESSSQEKNE-----DKETEKIESSFLEETKEKEDETKEK 511

Query: 89  TLSTPIEKLEAVQ-QLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKR 147
             S+  EK E  + +      + S + T++   + + K     + E     +N+   ++ 
Sbjct: 512 EESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEES---KENETETKE- 567

Query: 148 NIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEA 207
              K  + +   T +++ + I K     QE+  E      K  KE+S       + +TE 
Sbjct: 568 ---KEESSSQEETKEKENEKIEKEESAPQEETKEKEN--EKIEKEESASQEETKEKETET 622

Query: 208 LKKSSDLTDRNLSSLKVESERLQE 231
            +K    ++ +  ++  ESE+ ++
Sbjct: 623 KEKEESSSNESQENVNTESEKKEQ 646


>At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative /
           GPPS, putative / dimethylallyltransferase, putative /
           prenyl transferase, putative similar to GI:11322965;
           Except for first 55 amino acids, 52% identical to Prenyl
           transferase (Cyanophora paradoxa) (gi 99282). Location
           of est 120E9T7 (gb|T43950)
          Length = 417

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 10/105 (9%)

Query: 121 KTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVA 180
           K  A   ++  S LF  D   D    ++  KT +  + +T    I S       ++ KVA
Sbjct: 238 KDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFS------KVESKVA 291

Query: 181 ENMVMLTKNLKEQSQIASTII--KADTEALKK--SSDLTDRNLSS 221
           E M    KNL    Q+   I+     TE L K  ++DL   N+++
Sbjct: 292 EQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITA 336


>At5g38840.1 68418.m04698 forkhead-associated domain-containing
           protein / FHA domain-containing protein related to
           adaptor protein kanadaptin [Homo sapiens]
           gi|13562130|gb|AAK29177
          Length = 735

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 94  IEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTP 153
           +E+LE +++  + +   S+ A          K G+    E    D++D   R +    T 
Sbjct: 330 LEELENLEETLNDSIRESLGAKTGRKPTHGKKKGIVEDEEDLSSDEDDFYDRTQKKPSTK 389

Query: 154 NFTSNTTSQEDIDSILKYHQNMQEKV-AENMVMLTKNLKEQSQIASTIIKADT 205
             + N T  E +DS++    N+ +++ A+N  +LT+  K +++  + +   D+
Sbjct: 390 KGSENQTV-ETVDSLVDKRDNVLKEIEAKNEQLLTEKSKMETENVTEVTSGDS 441


>At5g28800.1 68418.m03541 hypothetical protein predicted protein,
           Arabidopsis thaliana
          Length = 118

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 175 MQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVE 225
           M+EK+ + M+ +TK  K+++ I   ++KA       SS + DRN S   +E
Sbjct: 1   MEEKMRKKMMKMTKKRKKKNIIKKRMVKA---LHVSSSPIFDRNSSKPVIE 48


>At5g23880.1 68418.m02805 cleavage and polyadenylation specificity
           factor identical to cleavage and polyadenylation
           specificity factor [Arabidopsis thaliana]
           SWISS-PROT:Q9LKF9
          Length = 739

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 8   LSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPS 67
           L + P PK  ++ M+ R  L+  ELIA EE  +   RLK+     +S++ E +T     S
Sbjct: 366 LQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQN---RLKREEALRASLVKEEETKASHGS 422

Query: 68  KDILSE 73
            D  SE
Sbjct: 423 DDNSSE 428


>At4g30993.2 68417.m04400 expressed protein
          Length = 285

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/31 (32%), Positives = 22/31 (70%)

Query: 234 RSAWKCWLWIMLAVVMVIFISKCSAYLDFFA 264
           +S+W C ++I L++ ++I++S  S +  FF+
Sbjct: 3   QSSWGCTIFIQLSLCLIIYVSLHSGHPFFFS 33


>At4g30993.1 68417.m04399 expressed protein
          Length = 209

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/31 (32%), Positives = 22/31 (70%)

Query: 234 RSAWKCWLWIMLAVVMVIFISKCSAYLDFFA 264
           +S+W C ++I L++ ++I++S  S +  FF+
Sbjct: 3   QSSWGCTIFIQLSLCLIIYVSLHSGHPFFFS 33


>At3g62940.2 68416.m07071 OTU-like cysteine protease family protein
           contains Pfam profile PF02338: OTU-like cysteine
           protease
          Length = 332

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 112 VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKY 171
           +DA+QE   +TV +     R E+  L + +  ++K    K          ++  D I K 
Sbjct: 17  MDASQEQQHETVEEMLARHRQEIKQLQNKETEMKKA-AAKGSKAEQKAKKKQVEDDISKL 75

Query: 172 HQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE 231
              +++K  + +   ++     S  ++ I K +T   K   D   R ++ + V ++  QE
Sbjct: 76  STKLKDKQLKELA--SQGFSSSS--SNNIAKDETTEKKGDIDTLVRAIAGVSVTAQ--QE 129

Query: 232 HSR 234
           HS+
Sbjct: 130 HSK 132


>At3g62940.1 68416.m07070 OTU-like cysteine protease family protein
           contains Pfam profile PF02338: OTU-like cysteine
           protease
          Length = 316

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 112 VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKY 171
           +DA+QE   +TV +     R E+  L + +  ++K    K          ++  D I K 
Sbjct: 1   MDASQEQQHETVEEMLARHRQEIKQLQNKETEMKKA-AAKGSKAEQKAKKKQVEDDISKL 59

Query: 172 HQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE 231
              +++K  + +   ++     S  ++ I K +T   K   D   R ++ + V ++  QE
Sbjct: 60  STKLKDKQLKELA--SQGFSSSS--SNNIAKDETTEKKGDIDTLVRAIAGVSVTAQ--QE 113

Query: 232 HSR 234
           HS+
Sbjct: 114 HSK 116


>At3g27350.1 68416.m03420 expressed protein
          Length = 274

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 123 VAKYGVELRSE-LFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAE 181
           V KYG E R    F +DD+D +    N++   ++      ++  + +LK   ++ EK  +
Sbjct: 121 VLKYGEEGRERNSFQIDDHDVTDELENVMFGGDYVKEEEEKKVEEELLKEDWSVGEKEKQ 180

Query: 182 NMVMLTKN 189
           +   +TKN
Sbjct: 181 HRKSVTKN 188


>At1g68670.1 68414.m07846 myb family transcription factor contains
           Pfam domain, PF00249: Myb-like DNA-binding domain
          Length = 354

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 173 QNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQEH 232
           Q  Q++V E    L   +K  S + +T   + TE     SDL        ++E ++ Q H
Sbjct: 154 QPFQKRVLETD--LQPAVKVASSMPATTTSSTTETCGGKSDLIKAGDEERRIEQQQSQSH 211

Query: 233 S-RSAWKCW 240
           + R   +CW
Sbjct: 212 THRKQRRCW 220


>At5g32605.1 68418.m03879 hypothetical protein
          Length = 365

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 176 QEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESE 227
           Q KV EN V   KN+ +QS+I +++ +   ++ +K  +L DR L   K   E
Sbjct: 264 QGKVEENQV---KNIDDQSKIWASLRRVTMDSSRKYVELLDRILDLDKKSKE 312


>At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein. A false
           intron was added between exons 2 and 3 to circumvent a
           frameshift caused by a sequencing error, as per Blake
           Meyers (bcmeyers@vegmail.ucdavis.edu)
          Length = 1308

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 4/125 (3%)

Query: 132 SELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLK 191
           SE FG+   ++  R + +        + T +++   +   H N+       +  ++K L 
Sbjct: 544 SEAFGIKPEENPFRSQAVTSYLKAARDMTREKECILVFSCHDNLDVDETSFIEAISKELH 603

Query: 192 EQSQIASTIIKADTEALKK----SSDLTDRNLSSLKVESERLQEHSRSAWKCWLWIMLAV 247
           +Q  I  T      E L +     S +    LSS  V S +  +H  +  + W    L +
Sbjct: 604 KQGFIPLTYNLLGRENLDEEMLYGSRVGIMILSSSYVSSRQSLDHLVAVMEHWKTTDLVI 663

Query: 248 VMVIF 252
           + + F
Sbjct: 664 IPIYF 668


>At3g12060.1 68416.m01500 expressed protein similar to hypothetical
           protein GB:CAB82953 GI:7340710 from [Arabidopsis
           thaliana]
          Length = 556

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 153 PNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIA--STIIKADTEALKK 210
           PN T + +S     S+      ++    EN+  +TKNL  +S +A  +T   A T  ++ 
Sbjct: 75  PNITVSNSSNSSPSSLDSNFTTLRTPAPENLTAVTKNLTFESPVANGTTDTNAKTITIQF 134

Query: 211 SSDLTDRNLS 220
            +     N+S
Sbjct: 135 QTGHAKENIS 144


>At2g47470.1 68415.m05925 thioredoxin family protein similar to
           protein disulfide isomerase [Dictyostelium discoideum]
           GI:2627440; contains Pfam profile: PF00085 Thioredoxin
          Length = 361

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 49  VESLSSMITELKTGPDKPSKDILSEYSKRAAFLKG 83
           VESL +++ EL    +   K +LS   + A+ LKG
Sbjct: 266 VESLDALVKELVAASEDEKKAVLSRIEEEASTLKG 300


>At2g25680.1 68415.m03078 expressed protein ; expression supported
           by MPSS
          Length = 456

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 54  SMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSH 105
           S++ ++K GP K     +S  + R  FLKG V    LS  +  + AV +LS+
Sbjct: 249 SIVHDIKFGPSKMKIVRISRKAWRNGFLKGTVPQLPLSV-LNSVVAVCKLSY 299


>At2g06140.1 68415.m00675 hypothetical protein 
          Length = 633

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 176 QEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNL 219
           Q +V EN V   KN+ +QS+I +++ K   E+ +K+ +  DR L
Sbjct: 554 QGEVEENQV---KNVDDQSKIRASLTKVTIESSRKNVESLDRIL 594


>At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:719291)
            [Arabidopsis thaliana]
          Length = 2603

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/57 (26%), Positives = 27/57 (47%)

Query: 140  NDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQI 196
            NDDS++K N+I   + T  +  +    S     +N+ E +A  +V+   +    S I
Sbjct: 2282 NDDSVQKSNVICLRSSTGASAQELRRTSSFDREENVAEPIANELVLQAHSCNVSSSI 2338


>At5g13460.1 68418.m01549 calmodulin-binding family protein low
           similarity to SF16 protein [Helianthus annuus]
           GI:560150; contains Pfam profile PF00612: IQ
           calmodulin-binding motif
          Length = 443

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 166 DSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVE 225
           D+ILK   N Q++  +++  LTK  KE       ++ +  EA  +   + +  ++  K  
Sbjct: 192 DNILKVDTNGQKRWDDSL--LTKEEKE------AVVMSKKEASLRRERIKEYAVTHRK-S 242

Query: 226 SERLQEHSRSAWKCWL--WI 243
           +E  Q+ S + WK WL  W+
Sbjct: 243 AESYQKRSNTKWKYWLDEWV 262


>At5g01840.1 68418.m00103 ovate family protein 59% similar to ovate
           protein (GI:23429649) [Lycopersicon esculentum];
           contains TIGRFAM TIGR01568 : uncharacterized
           plant-specific domain TIGR01568
          Length = 270

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)

Query: 157 SNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKE 192
           S    +  +D    + ++M+E +AEN +  TK+L+E
Sbjct: 199 SRAVVKASVDPKRDFKESMEEMIAENKIRATKDLEE 234


>At4g24950.1 68417.m03574 hypothetical protein
          Length = 157

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 130 LRSELFGLDDNDDSLRKRNIIKTPN-FTSNTTSQEDIDSILKYHQNMQEKVAENMVML 186
           LR +LF   D+DD  +K  ++   + ++SN TS  D     K    ++  V+  MV+L
Sbjct: 74  LRRKLFHDSDDDDQTKKTTLLSHSSCWSSNVTSSSDTTK-AKKKTTIRRFVSVTMVLL 130


>At3g13870.2 68416.m01752 root hair defective 3 (RHD3) identical to
           root hair defective 3 (RHD3) GI:1839188 from
           [Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811)
          Length = 738

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 137 LDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLT 187
           LDD  D++ K   +   N T N  + + I +I     +  EKVA    ++T
Sbjct: 527 LDDELDNIEKTLTLALFNSTGNNATSKSISTIDSLASSTWEKVAPEKTLIT 577


>At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical to
           root hair defective 3 (RHD3) GI:1839188 from
           [Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811)
          Length = 802

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 137 LDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLT 187
           LDD  D++ K   +   N T N  + + I +I     +  EKVA    ++T
Sbjct: 591 LDDELDNIEKTLTLALFNSTGNNATSKSISTIDSLASSTWEKVAPEKTLIT 641


>At3g05900.1 68416.m00664 neurofilament protein-related similar to
           NF-180 (GI:632549) [Petromyzon marinus] similar to
           Neurofilament triplet H protein (200 kDa neurofilament
           protein) (Neurofilament heavy polypeptide) (NF-H)
           (Swiss-Prot:P12036) [Homo sapiens]
          Length = 673

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 15/169 (8%)

Query: 52  LSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMS 111
           +   ITE K   D+PSKD  +  S  A   +  V T        K E  + +S  A  + 
Sbjct: 403 IEKAITEEKYVVDEPSKDETTSESGSALCPEKAVPTNQDLDTEPKKETEEDVSSPADIIE 462

Query: 112 VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKY 171
              T+E       K+ VE  S+     ++  +L    ++ T N  S+T  +++ +  +  
Sbjct: 463 KAITEE-------KHVVEEPSKDEKTSESGSALSPEKVVPT-NQDSDTEPKKETEGDVPS 514

Query: 172 HQNMQEK-VAENMVMLTKNLKEQSQIAS------TIIKADTEALKKSSD 213
             ++ EK + +   ++ + LK++ +  S      T + A+ E +KK +D
Sbjct: 515 PADVIEKAITDEKHVVEEPLKDEQENVSEAKDVVTKLAAEDENIKKDTD 563


>At3g05380.1 68416.m00588 myb family transcription factor contains
           Pfam profile:PF00249 Myb-like DNA-binding domain
          Length = 1055

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 13  VPKKSRLEMNV-RQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTG 62
           +P+ +RLE +V +  L +    ++    +   +LK+Y ES+    TEL+TG
Sbjct: 665 IPRLTRLEWSVIKSSLGRPRRFSERFLHEEREKLKQYRESVRKHYTELRTG 715


>At1g77500.1 68414.m09025 expressed protein contains Pfam domains,
           PF04782: Protein of unknown function (DUF632) and
           PF04783: Protein of unknown function (DUF630)
          Length = 879

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 95  EKLEAVQQL-SHGAATMSVDATQEIHQKTVAKYGVELRS 132
           EK   ++++ SHGA ++ +DAT+   +K + K  V +RS
Sbjct: 572 EKCRRLKKMDSHGAESIKIDATRAAIRKLLTKIDVCIRS 610


>At1g03830.1 68414.m00364 guanylate-binding family protein contains
           Pfam domains PF02263: Guanylate-binding protein,
           N-terminal domain and PF02841: Guanylate-binding
           protein, C-terminal domain
          Length = 991

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)

Query: 107 AATMSVDATQE-IHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSN--TTSQE 163
           A T  + A +E + Q +  + G  LR+E   + D  + +      K         +T  E
Sbjct: 535 AVTEKIAAMEEKLKQASTTEDG--LRAEFSRVLDEKEKIITEKAAKLATLEQQLASTRAE 592

Query: 164 DIDSILKYHQNMQEKVAENMVMLTKNLKEQS-QIASTIIKADTEALKKSSDLTDRNLSSL 222
              S LK  +   E     + M   N K +S + AS +++ +TE LK+  D  D+     
Sbjct: 593 LKKSALKVDECSSEAKDVRLQMSLLNEKYESVKSASELLETETETLKREKDELDKKCHIH 652

Query: 223 KVESERL 229
             E E+L
Sbjct: 653 LEELEKL 659


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.313    0.126    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,557,491
Number of Sequences: 28952
Number of extensions: 205363
Number of successful extensions: 814
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 796
Number of HSP's gapped (non-prelim): 54
length of query: 269
length of database: 12,070,560
effective HSP length: 80
effective length of query: 189
effective length of database: 9,754,400
effective search space: 1843581600
effective search space used: 1843581600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)

- SilkBase 1999-2023 -