Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001916-TA|BGIBMGA001916-PA|undefined
(269 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55600.1 68416.m06175 expressed protein predicted proteins, A... 49 3e-06
At1g54110.1 68414.m06168 cation exchanger, putative (CAX10) Ca2+... 42 6e-04
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 36 0.029
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 33 0.27
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 33 0.27
At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1) iden... 31 0.62
At4g36550.1 68417.m05190 U-box domain-containing protein low sim... 31 0.62
At5g54480.1 68418.m06784 hypothetical protein 31 0.81
At1g03760.1 68414.m00356 prefoldin subunit family protein contai... 31 1.1
At2g43640.1 68415.m05424 signal recognition particle 14 kDa fami... 30 1.4
At5g48660.1 68418.m06022 expressed protein ; expression supporte... 30 1.9
At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family pr... 30 1.9
At3g45680.1 68416.m04937 proton-dependent oligopeptide transport... 30 1.9
At2g28620.1 68415.m03479 kinesin motor protein-related 29 2.5
At2g28150.1 68415.m03419 expressed protein 29 2.5
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.5
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 29 3.3
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 3.3
At3g52300.1 68416.m05748 ATP synthase D chain-related contains w... 29 3.3
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 29 3.3
At2g29040.1 68415.m03530 exostosin family protein contains Pfam ... 29 3.3
At2g22795.1 68415.m02704 expressed protein 29 3.3
At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative ... 29 3.3
At5g38840.1 68418.m04698 forkhead-associated domain-containing p... 29 4.3
At5g28800.1 68418.m03541 hypothetical protein predicted protein,... 29 4.3
At5g23880.1 68418.m02805 cleavage and polyadenylation specificit... 29 4.3
At4g30993.2 68417.m04400 expressed protein 29 4.3
At4g30993.1 68417.m04399 expressed protein 29 4.3
At3g62940.2 68416.m07071 OTU-like cysteine protease family prote... 29 4.3
At3g62940.1 68416.m07070 OTU-like cysteine protease family prote... 29 4.3
At3g27350.1 68416.m03420 expressed protein 29 4.3
At1g68670.1 68414.m07846 myb family transcription factor contain... 29 4.3
At5g32605.1 68418.m03879 hypothetical protein 28 5.7
At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR... 28 5.7
At3g12060.1 68416.m01500 expressed protein similar to hypothetic... 28 5.7
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 28 5.7
At2g25680.1 68415.m03078 expressed protein ; expression supporte... 28 5.7
At2g06140.1 68415.m00675 hypothetical protein 28 5.7
At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:71... 28 5.7
At5g13460.1 68418.m01549 calmodulin-binding family protein low s... 28 7.6
At5g01840.1 68418.m00103 ovate family protein 59% similar to ova... 28 7.6
At4g24950.1 68417.m03574 hypothetical protein 28 7.6
At3g13870.2 68416.m01752 root hair defective 3 (RHD3) identical ... 28 7.6
At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical ... 28 7.6
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 28 7.6
At3g05380.1 68416.m00588 myb family transcription factor contain... 28 7.6
At1g77500.1 68414.m09025 expressed protein contains Pfam domains... 28 7.6
At1g03830.1 68414.m00364 guanylate-binding family protein contai... 28 7.6
>At3g55600.1 68416.m06175 expressed protein predicted proteins,
Arabidopsis thaliana
Length = 240
Score = 49.2 bits (112), Expect = 3e-06
Identities = 50/244 (20%), Positives = 111/244 (45%), Gaps = 24/244 (9%)
Query: 17 SRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITEL---KT--GPDKPSKDIL 71
S+ E+N+R+LLS + +L YV +L + +L KT G + +K +
Sbjct: 5 SKTEINLRRLLSAAPNQQNQS------KLMHYVATLREQLEQLSEEKTPEGLPRVTKAKV 58
Query: 72 SEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELR 131
+EY ++ + + + T + + + G++ +I + + +LR
Sbjct: 59 NEYYEKIEAVASKIASQEPETEVSDEPFAKDSTSGSSP-------KIEDEPRSPTSPQLR 111
Query: 132 SELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLK 191
+ + S + + +T +Q ID H+ +QE + + MV+L + LK
Sbjct: 112 RRIVPASSKEQSFDAADADSSKPIKLDTAAQAHIDK----HRKLQEDLTDEMVVLARQLK 167
Query: 192 EQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE-HSRSA-WKCWLWIMLAVVM 249
E+SQ S ++ + L + + +++L+S + R + +S+S+ C+ W+++ ++
Sbjct: 168 ERSQAISQSVQNTEKILDSTEEAIEQSLASTGHATTRATKIYSQSSKTSCFQWLLIFAMI 227
Query: 250 VIFI 253
+FI
Sbjct: 228 CVFI 231
>At1g54110.1 68414.m06168 cation exchanger, putative (CAX10)
Ca2+:Cation Antiporter (CaCA) Family member
PMID:11500563
Length = 236
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 173 QNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSS---LKVESERL 229
+ +QE + + MV+L + LKE+SQ+ S ++ + L + + +++L+S V + ++
Sbjct: 145 RKLQEDLTDEMVVLARQLKERSQMISQSVQNTEKILDSTEEAIEQSLASTGHATVRATKI 204
Query: 230 QEHSRSAWKCWLWIMLAVVMVIFI 253
S S C+ W+++ + +FI
Sbjct: 205 YSES-SKTSCFQWLLILAMTCVFI 227
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 35.9 bits (79), Expect = 0.029
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 11/193 (5%)
Query: 4 EKPKLSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGP 63
EK LS + + + N K E +E + + + VE E K
Sbjct: 68 EKKALSDLKSKLEEAIVDNTLLKTKKKESSPMKEKKEEVVKPEAEVEKKKEEAAEEKVEE 127
Query: 64 DKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 123
+K S+ +++E + +A ++ VV + P E++ V + + T+E +KT
Sbjct: 128 EKKSEAVVTEEAPKAETVEAVVTEEII--PKEEVTTVVEKVE-------EETKEEEKKTE 178
Query: 124 AKYGVELRSELFGLDDNDDSLRKR-NIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAEN 182
E+++E ++D D+S+ K + P S D+ +LK+ + KV E
Sbjct: 179 DVVTEEVKAETIEVEDEDESVDKDIELWGVPLLPSKGAESTDV-ILLKFLRARDFKVNEA 237
Query: 183 MVMLTKNLKEQSQ 195
ML K LK + Q
Sbjct: 238 FEMLKKTLKWRKQ 250
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 32.7 bits (71), Expect = 0.27
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 57 TELKTGPDKPSKDILSEYSKRAAFLKGVVQT---ATLSTPIEKLEAVQQLSHGAATMSVD 113
T L G D P K + +E K +V+T + + +P E LE Q+L G S
Sbjct: 198 TSLDKGTDFPLKSV-TETEKIVLDASPIVETGDDSVIGSPSENLET-QKLQDGKTDCSPP 255
Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILK 170
A E V + +E DDN D L N T+ ++D D LK
Sbjct: 256 ANAESKTLPVGETSLEKEYPQKFQDDNTDCLPPANAESKRLPVGETSLEKDTDFPLK 312
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 32.7 bits (71), Expect = 0.27
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 57 TELKTGPDKPSKDILSEYSKRAAFLKGVVQT---ATLSTPIEKLEAVQQLSHGAATMSVD 113
T L G D P K + +E K +V+T + + +P E LE Q+L G S
Sbjct: 198 TSLDKGTDFPLKSV-TETEKIVLDASPIVETGDDSVIGSPSENLET-QKLQDGKTDCSPP 255
Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILK 170
A E V + +E DDN D L N T+ ++D D LK
Sbjct: 256 ANAESKTLPVGETSLEKEYPQKFQDDNTDCLPPANAESKRLPVGETSLEKDTDFPLK 312
>At4g39850.1 68417.m05646 peroxisomal ABC transporter (PXA1)
identical to peroxisomal ABC transporter PXA1
GI:15320529 from [Arabidopsis thaliana]; contains Pfam
profile PF00005: ABC transporter;
Length = 1337
Score = 31.5 bits (68), Expect = 0.62
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 38 SIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLST 92
SID + RL + +E L++ ++ L TG KPS DIL ++ R L G A L T
Sbjct: 859 SIDADQRLTRDLEKLTADLSGLLTGMVKPSVDIL-WFTWRMKLLTGQRGVAILYT 912
>At4g36550.1 68417.m05190 U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 577
Score = 31.5 bits (68), Expect = 0.62
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 114 ATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKT-PNFTSNTTSQEDIDSILKYH 172
A + + ++ + V L SE+ +++L ++ P+ S TS + S+LK
Sbjct: 316 AIESLEEEVFKMFSVFLESEVVA----EEALNILEVLSNHPHGPSKITSSGSLSSLLKIV 371
Query: 173 QNMQEKVAENMVMLTKNLKEQSQIASTIIKAD 204
++ E + E ++ KNL +I ++ D
Sbjct: 372 ESQAEHLQEQAMITLKNLSSSMEICLEMVSLD 403
>At5g54480.1 68418.m06784 hypothetical protein
Length = 720
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 133 ELFGLDDNDDSLRKRNI--IKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNL 190
E+ LD DD + I+ + + D +S+++ ++ +K + KN+
Sbjct: 182 EIIELDHRDDEVESDGFREIREREGIPDLEPESDYNSLIRKNKKKNKKKKKK-----KNV 236
Query: 191 KEQSQIASTIIKADTEALK---KSSDLTDRNLSSLKVESERLQE 231
+E S +AS I K D EA + +D TD + + E+E E
Sbjct: 237 RESSSVASEIDKRDVEANTCNGQVADETDNSNEACAQETENTPE 280
>At1g03760.1 68414.m00356 prefoldin subunit family protein
contains similarity to Swiss-Prot:O94763 RNA polymerase
II subunit 5-mediating protein (RPB5-mediating protein)
[Homo sapiens]; contains Pfam profile PF02996:
Prefoldin subunit
Length = 391
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 20 EMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAA 79
E +VR+ S E E+ ++ N RL++YV+ ++I +K PD+ +++ + K A
Sbjct: 16 EEDVRKAASYMEEKIGEKRVEMN-RLQQYVDENDNLINLVKKLPDQLHHNVMVPFGKMAF 74
Query: 80 FLKGVVQT 87
F ++ T
Sbjct: 75 FPGRLIHT 82
>At2g43640.1 68415.m05424 signal recognition particle 14 kDa family
protein / SRP14 family protein similar to SP|P16254
Signal recognition particle 14 kDa protein (SRP14) {Mus
musculus}; contains Pfam profile: PF02290 signal
recognition particle 14kD protein
Length = 121
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 76 KRAAFLKGVVQTATLSTPIEKLE--AVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSE 133
KR++ LK VQ LS+ E +E + + + G T+S + HQ+ A Y L++
Sbjct: 31 KRSS-LKSKVQKRKLSSVGESIEYRCLIRATDGKKTVSTSVGAKDHQRFQASYATILKAH 89
Query: 134 LFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDI 165
+ L + RK++ +++TT + +
Sbjct: 90 MTALKKRERKDRKKSTEAEKKESTSTTKSKKL 121
>At5g48660.1 68418.m06022 expressed protein ; expression supported
by MPSS
Length = 219
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 151 KTPNFTSNT-TSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALK 209
K N SN +S+E+++ + K ++EK + + + + S I + KA+TE+ +
Sbjct: 114 KLINLRSNVGSSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKE 173
Query: 210 KSSDL--TDRNLSSLKVES-ERLQEHSR 234
K L + ++++L+ +S E L E+ R
Sbjct: 174 KEKKLETAETHVTALQKQSAELLLEYDR 201
>At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family
protein similar to CoA-thioester hydrolase CHY1
(beta-hydroxyisobutyryl-CoA hydrolase) [Arabidopsis
thaliana] GI:8572760; contains Pfam profile PF00378:
enoyl-CoA hydratase/isomerase family protein
Length = 381
Score = 29.9 bits (64), Expect = 1.9
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 85 VQTATLSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSL 144
V T P EKL ++++ +A +S D Q+I Q T++KY SE + SL
Sbjct: 188 VGLGTHYVPSEKLASLKEAIL-SANLSEDPNQDI-QATLSKYSSNPESEA-----HLKSL 240
Query: 145 RKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAE 181
I++ F+SN + +E I+ + KY Q+ + V E
Sbjct: 241 LPH--IESA-FSSNKSIKETIEELKKYQQSTESSVVE 274
>At3g45680.1 68416.m04937 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 558
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 3 IEKPKLSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRL 45
+EK ++ +P KS +N L++K +L KE S++ WRL
Sbjct: 269 LEKEVKTSAAMPSKSFRFLNRAALMTKDDLNQKEGSVNNIWRL 311
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 29.5 bits (63), Expect = 2.5
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 17/191 (8%)
Query: 49 VESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAA 108
++SL + L D+ SE +K + L+ + + T S LE +Q H
Sbjct: 636 IKSLDDIAGNLDKDSQSTLNDLNSEVTKHSCALEDMFKGFT-SEAYTLLEGLQGSLHNQE 694
Query: 109 TMSVDATQE---IHQKTV--AKYGVELRSELFG-LDDNDDSLRK----RNIIKTPNFTSN 158
TQ+ +H +++ AK + + F LD + + L K + ++
Sbjct: 695 EKLSAFTQQQRDLHSRSMDSAKSVSTVMLDFFKTLDTHANKLTKLAEDAQNVNEQKLSAF 754
Query: 159 TTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIK----ADTEALKKSSDL 214
T E+ SI + M EKVAE + KE QIA I+ + T AL++
Sbjct: 755 TKKFEE--SIANEEKQMLEKVAELLASSNARKKELVQIAVQDIRQGSSSQTGALQQEMSA 812
Query: 215 TDRNLSSLKVE 225
+ SS+KV+
Sbjct: 813 MQDSASSIKVQ 823
>At2g28150.1 68415.m03419 expressed protein
Length = 540
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 121 KTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNM-QEKV 179
K + Y + S G+ +N DS P+ + N S SIL Q + EK
Sbjct: 423 KRSSSYNGDRASNQMGVAENGDS--------KPDSSKNNPSSRKASSILGKQQPLVSEKR 474
Query: 180 AENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQEHSR 234
++ TKN+ ++ K TE+L+K + +K++ ERL +R
Sbjct: 475 RDSSEDTTKNIPCTTKTHDACSKRITESLRKPDSFREDEERVIKID-ERLASGAR 528
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 159 TTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTI--IKADTEALKKSSDLTD 216
+T++++I + + ++N+Q + L K + + S +AS + + A L+ + +
Sbjct: 888 STAEDNISRLTEENRNVQAAKENAELELQKAVADASSVASELDEVLATKSTLEAALMQAE 947
Query: 217 RNLSSLKVESERLQEHSRSA 236
RN+S + E E Q + +A
Sbjct: 948 RNISDIISEKEEAQGRTATA 967
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 137 LDDNDDSLRKRNIIKTPNFTSNTTSQE--DIDSILKYHQNMQEKVAENMVMLTKNLKEQS 194
+D+ D L R +T S++ Q+ S ++ N+ K + KNL+ +S
Sbjct: 1054 IDEEDTPLLSRKPEETNRSRSSSELQKLSSTSSKVRSKGNVFWKWLGCFPLQPKNLRSRS 1113
Query: 195 QIASTIIKADTEALKKSSDLTD-RNLSSLKVESERLQE 231
+ + + +A EALK+ L D R L +ES+++++
Sbjct: 1114 RRTTALEEALEEALKEREKLEDTRELQIALIESKKIKK 1151
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 29.1 bits (62), Expect = 3.3
Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 99 AVQQLSHGAATMS-VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTS 157
A ++L T+S E Q+ + + VEL S+ +++ LR+R+ + +S
Sbjct: 145 AKEELEKREKTISEASLKHESLQEELKRANVELASQAREIEELKHKLRERDEERAALQSS 204
Query: 158 NTTSQEDIDSILKYHQNMQEKVA------ENMVMLTKNLKEQSQIASTIIKADTEALKKS 211
T +E+++ + + N ++V+ E+ L E + I A AL++
Sbjct: 205 LTLKEEELEKMRQEIANRSKEVSMAISEFESKSQLLSKANEVVKRQEGEIYALQRALEEK 264
Query: 212 SDLTDRNLSSLKVESERLQE 231
+ + + ++ K+E E+L+E
Sbjct: 265 EEELEISKATKKLEQEKLRE 284
>At3g52300.1 68416.m05748 ATP synthase D chain-related contains weak
similarity to ATP synthase D chain, mitochondrial (EC
3.6.3.14) (Swiss-Prot:P31399) [Rattus norvegicus]
Length = 168
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 47 KYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATL-STPIEK-LEAVQQLS 104
KY E+ S+ E+ DK + + ++ LK Q + S +EK + VQ++S
Sbjct: 78 KYKEAYDSI--EIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKESERLEKEIADVQEIS 135
Query: 105 HGAATMSVDATQEIHQKTVAKYGVELRSELFG 136
+TM+ D E H + K+ E+R++ +G
Sbjct: 136 KKLSTMTADEYFEKHPELKKKFDDEIRNDNWG 167
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 158 NTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQS-QIASTIIKADTEALKK 210
++++Q D+ + +M EK+AE++ K L + + +IA + IK + EA+ K
Sbjct: 593 DSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDK 646
>At2g29040.1 68415.m03530 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 720
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 124 AKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILK 170
AK VE + L +DDNDD L + + PN +S+ ++D D L+
Sbjct: 186 AKKDVEPKKAL--VDDNDDDLETKRGKELPNDSSSNVVEDDNDDDLE 230
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.1 bits (62), Expect = 3.3
Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 29 KCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTA 88
K E ++EE++D K+ VES S E DK ++ I S + + + +
Sbjct: 457 KEESSSQEETMDKETEAKEKVESSSQEKNE-----DKETEKIESSFLEETKEKEDETKEK 511
Query: 89 TLSTPIEKLEAVQ-QLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKR 147
S+ EK E + + + S + T++ + + K + E +N+ ++
Sbjct: 512 EESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEES---KENETETKE- 567
Query: 148 NIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEA 207
K + + T +++ + I K QE+ E K KE+S + +TE
Sbjct: 568 ---KEESSSQEETKEKENEKIEKEESAPQEETKEKEN--EKIEKEESASQEETKEKETET 622
Query: 208 LKKSSDLTDRNLSSLKVESERLQE 231
+K ++ + ++ ESE+ ++
Sbjct: 623 KEKEESSSNESQENVNTESEKKEQ 646
>At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative /
GPPS, putative / dimethylallyltransferase, putative /
prenyl transferase, putative similar to GI:11322965;
Except for first 55 amino acids, 52% identical to Prenyl
transferase (Cyanophora paradoxa) (gi 99282). Location
of est 120E9T7 (gb|T43950)
Length = 417
Score = 29.1 bits (62), Expect = 3.3
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 121 KTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVA 180
K A ++ S LF D D ++ KT + + +T I S ++ KVA
Sbjct: 238 KDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFS------KVESKVA 291
Query: 181 ENMVMLTKNLKEQSQIASTII--KADTEALKK--SSDLTDRNLSS 221
E M KNL Q+ I+ TE L K ++DL N+++
Sbjct: 292 EQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITA 336
>At5g38840.1 68418.m04698 forkhead-associated domain-containing
protein / FHA domain-containing protein related to
adaptor protein kanadaptin [Homo sapiens]
gi|13562130|gb|AAK29177
Length = 735
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 94 IEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTP 153
+E+LE +++ + + S+ A K G+ E D++D R + T
Sbjct: 330 LEELENLEETLNDSIRESLGAKTGRKPTHGKKKGIVEDEEDLSSDEDDFYDRTQKKPSTK 389
Query: 154 NFTSNTTSQEDIDSILKYHQNMQEKV-AENMVMLTKNLKEQSQIASTIIKADT 205
+ N T E +DS++ N+ +++ A+N +LT+ K +++ + + D+
Sbjct: 390 KGSENQTV-ETVDSLVDKRDNVLKEIEAKNEQLLTEKSKMETENVTEVTSGDS 441
>At5g28800.1 68418.m03541 hypothetical protein predicted protein,
Arabidopsis thaliana
Length = 118
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 175 MQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVE 225
M+EK+ + M+ +TK K+++ I ++KA SS + DRN S +E
Sbjct: 1 MEEKMRKKMMKMTKKRKKKNIIKKRMVKA---LHVSSSPIFDRNSSKPVIE 48
>At5g23880.1 68418.m02805 cleavage and polyadenylation specificity
factor identical to cleavage and polyadenylation
specificity factor [Arabidopsis thaliana]
SWISS-PROT:Q9LKF9
Length = 739
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 8 LSTVPVPKKSRLEMNVRQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTGPDKPS 67
L + P PK ++ M+ R L+ ELIA EE + RLK+ +S++ E +T S
Sbjct: 366 LQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQN---RLKREEALRASLVKEEETKASHGS 422
Query: 68 KDILSE 73
D SE
Sbjct: 423 DDNSSE 428
>At4g30993.2 68417.m04400 expressed protein
Length = 285
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 234 RSAWKCWLWIMLAVVMVIFISKCSAYLDFFA 264
+S+W C ++I L++ ++I++S S + FF+
Sbjct: 3 QSSWGCTIFIQLSLCLIIYVSLHSGHPFFFS 33
>At4g30993.1 68417.m04399 expressed protein
Length = 209
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 234 RSAWKCWLWIMLAVVMVIFISKCSAYLDFFA 264
+S+W C ++I L++ ++I++S S + FF+
Sbjct: 3 QSSWGCTIFIQLSLCLIIYVSLHSGHPFFFS 33
>At3g62940.2 68416.m07071 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 332
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 112 VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKY 171
+DA+QE +TV + R E+ L + + ++K K ++ D I K
Sbjct: 17 MDASQEQQHETVEEMLARHRQEIKQLQNKETEMKKA-AAKGSKAEQKAKKKQVEDDISKL 75
Query: 172 HQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE 231
+++K + + ++ S ++ I K +T K D R ++ + V ++ QE
Sbjct: 76 STKLKDKQLKELA--SQGFSSSS--SNNIAKDETTEKKGDIDTLVRAIAGVSVTAQ--QE 129
Query: 232 HSR 234
HS+
Sbjct: 130 HSK 132
>At3g62940.1 68416.m07070 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 316
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 112 VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKY 171
+DA+QE +TV + R E+ L + + ++K K ++ D I K
Sbjct: 1 MDASQEQQHETVEEMLARHRQEIKQLQNKETEMKKA-AAKGSKAEQKAKKKQVEDDISKL 59
Query: 172 HQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQE 231
+++K + + ++ S ++ I K +T K D R ++ + V ++ QE
Sbjct: 60 STKLKDKQLKELA--SQGFSSSS--SNNIAKDETTEKKGDIDTLVRAIAGVSVTAQ--QE 113
Query: 232 HSR 234
HS+
Sbjct: 114 HSK 116
>At3g27350.1 68416.m03420 expressed protein
Length = 274
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 123 VAKYGVELRSE-LFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAE 181
V KYG E R F +DD+D + N++ ++ ++ + +LK ++ EK +
Sbjct: 121 VLKYGEEGRERNSFQIDDHDVTDELENVMFGGDYVKEEEEKKVEEELLKEDWSVGEKEKQ 180
Query: 182 NMVMLTKN 189
+ +TKN
Sbjct: 181 HRKSVTKN 188
>At1g68670.1 68414.m07846 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 354
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 173 QNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESERLQEH 232
Q Q++V E L +K S + +T + TE SDL ++E ++ Q H
Sbjct: 154 QPFQKRVLETD--LQPAVKVASSMPATTTSSTTETCGGKSDLIKAGDEERRIEQQQSQSH 211
Query: 233 S-RSAWKCW 240
+ R +CW
Sbjct: 212 THRKQRRCW 220
>At5g32605.1 68418.m03879 hypothetical protein
Length = 365
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 176 QEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVESE 227
Q KV EN V KN+ +QS+I +++ + ++ +K +L DR L K E
Sbjct: 264 QGKVEENQV---KNIDDQSKIWASLRRVTMDSSRKYVELLDRILDLDKKSKE 312
>At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein. A false
intron was added between exons 2 and 3 to circumvent a
frameshift caused by a sequencing error, as per Blake
Meyers (bcmeyers@vegmail.ucdavis.edu)
Length = 1308
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 4/125 (3%)
Query: 132 SELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLK 191
SE FG+ ++ R + + + T +++ + H N+ + ++K L
Sbjct: 544 SEAFGIKPEENPFRSQAVTSYLKAARDMTREKECILVFSCHDNLDVDETSFIEAISKELH 603
Query: 192 EQSQIASTIIKADTEALKK----SSDLTDRNLSSLKVESERLQEHSRSAWKCWLWIMLAV 247
+Q I T E L + S + LSS V S + +H + + W L +
Sbjct: 604 KQGFIPLTYNLLGRENLDEEMLYGSRVGIMILSSSYVSSRQSLDHLVAVMEHWKTTDLVI 663
Query: 248 VMVIF 252
+ + F
Sbjct: 664 IPIYF 668
>At3g12060.1 68416.m01500 expressed protein similar to hypothetical
protein GB:CAB82953 GI:7340710 from [Arabidopsis
thaliana]
Length = 556
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 153 PNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIA--STIIKADTEALKK 210
PN T + +S S+ ++ EN+ +TKNL +S +A +T A T ++
Sbjct: 75 PNITVSNSSNSSPSSLDSNFTTLRTPAPENLTAVTKNLTFESPVANGTTDTNAKTITIQF 134
Query: 211 SSDLTDRNLS 220
+ N+S
Sbjct: 135 QTGHAKENIS 144
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 49 VESLSSMITELKTGPDKPSKDILSEYSKRAAFLKG 83
VESL +++ EL + K +LS + A+ LKG
Sbjct: 266 VESLDALVKELVAASEDEKKAVLSRIEEEASTLKG 300
>At2g25680.1 68415.m03078 expressed protein ; expression supported
by MPSS
Length = 456
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 54 SMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSH 105
S++ ++K GP K +S + R FLKG V LS + + AV +LS+
Sbjct: 249 SIVHDIKFGPSKMKIVRISRKAWRNGFLKGTVPQLPLSV-LNSVVAVCKLSY 299
>At2g06140.1 68415.m00675 hypothetical protein
Length = 633
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 176 QEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNL 219
Q +V EN V KN+ +QS+I +++ K E+ +K+ + DR L
Sbjct: 554 QGEVEENQV---KNVDDQSKIRASLTKVTIESSRKNVESLDRIL 594
>At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:719291)
[Arabidopsis thaliana]
Length = 2603
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 140 NDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQI 196
NDDS++K N+I + T + + S +N+ E +A +V+ + S I
Sbjct: 2282 NDDSVQKSNVICLRSSTGASAQELRRTSSFDREENVAEPIANELVLQAHSCNVSSSI 2338
>At5g13460.1 68418.m01549 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 443
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 166 DSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSSLKVE 225
D+ILK N Q++ +++ LTK KE ++ + EA + + + ++ K
Sbjct: 192 DNILKVDTNGQKRWDDSL--LTKEEKE------AVVMSKKEASLRRERIKEYAVTHRK-S 242
Query: 226 SERLQEHSRSAWKCWL--WI 243
+E Q+ S + WK WL W+
Sbjct: 243 AESYQKRSNTKWKYWLDEWV 262
>At5g01840.1 68418.m00103 ovate family protein 59% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 270
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 157 SNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKE 192
S + +D + ++M+E +AEN + TK+L+E
Sbjct: 199 SRAVVKASVDPKRDFKESMEEMIAENKIRATKDLEE 234
>At4g24950.1 68417.m03574 hypothetical protein
Length = 157
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 130 LRSELFGLDDNDDSLRKRNIIKTPN-FTSNTTSQEDIDSILKYHQNMQEKVAENMVML 186
LR +LF D+DD +K ++ + ++SN TS D K ++ V+ MV+L
Sbjct: 74 LRRKLFHDSDDDDQTKKTTLLSHSSCWSSNVTSSSDTTK-AKKKTTIRRFVSVTMVLL 130
>At3g13870.2 68416.m01752 root hair defective 3 (RHD3) identical to
root hair defective 3 (RHD3) GI:1839188 from
[Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811)
Length = 738
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 137 LDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLT 187
LDD D++ K + N T N + + I +I + EKVA ++T
Sbjct: 527 LDDELDNIEKTLTLALFNSTGNNATSKSISTIDSLASSTWEKVAPEKTLIT 577
>At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical to
root hair defective 3 (RHD3) GI:1839188 from
[Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811)
Length = 802
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 137 LDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLT 187
LDD D++ K + N T N + + I +I + EKVA ++T
Sbjct: 591 LDDELDNIEKTLTLALFNSTGNNATSKSISTIDSLASSTWEKVAPEKTLIT 641
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 27.9 bits (59), Expect = 7.6
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 52 LSSMITELKTGPDKPSKDILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMS 111
+ ITE K D+PSKD + S A + V T K E + +S A +
Sbjct: 403 IEKAITEEKYVVDEPSKDETTSESGSALCPEKAVPTNQDLDTEPKKETEEDVSSPADIIE 462
Query: 112 VDATQEIHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSNTTSQEDIDSILKY 171
T+E K+ VE S+ ++ +L ++ T N S+T +++ + +
Sbjct: 463 KAITEE-------KHVVEEPSKDEKTSESGSALSPEKVVPT-NQDSDTEPKKETEGDVPS 514
Query: 172 HQNMQEK-VAENMVMLTKNLKEQSQIAS------TIIKADTEALKKSSD 213
++ EK + + ++ + LK++ + S T + A+ E +KK +D
Sbjct: 515 PADVIEKAITDEKHVVEEPLKDEQENVSEAKDVVTKLAAEDENIKKDTD 563
>At3g05380.1 68416.m00588 myb family transcription factor contains
Pfam profile:PF00249 Myb-like DNA-binding domain
Length = 1055
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 13 VPKKSRLEMNV-RQLLSKCELIAKEESIDGNWRLKKYVESLSSMITELKTG 62
+P+ +RLE +V + L + ++ + +LK+Y ES+ TEL+TG
Sbjct: 665 IPRLTRLEWSVIKSSLGRPRRFSERFLHEEREKLKQYRESVRKHYTELRTG 715
>At1g77500.1 68414.m09025 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 879
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 95 EKLEAVQQL-SHGAATMSVDATQEIHQKTVAKYGVELRS 132
EK ++++ SHGA ++ +DAT+ +K + K V +RS
Sbjct: 572 EKCRRLKKMDSHGAESIKIDATRAAIRKLLTKIDVCIRS 610
>At1g03830.1 68414.m00364 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 991
Score = 27.9 bits (59), Expect = 7.6
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 107 AATMSVDATQE-IHQKTVAKYGVELRSELFGLDDNDDSLRKRNIIKTPNFTSN--TTSQE 163
A T + A +E + Q + + G LR+E + D + + K +T E
Sbjct: 535 AVTEKIAAMEEKLKQASTTEDG--LRAEFSRVLDEKEKIITEKAAKLATLEQQLASTRAE 592
Query: 164 DIDSILKYHQNMQEKVAENMVMLTKNLKEQS-QIASTIIKADTEALKKSSDLTDRNLSSL 222
S LK + E + M N K +S + AS +++ +TE LK+ D D+
Sbjct: 593 LKKSALKVDECSSEAKDVRLQMSLLNEKYESVKSASELLETETETLKREKDELDKKCHIH 652
Query: 223 KVESERL 229
E E+L
Sbjct: 653 LEELEKL 659
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.126 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,557,491
Number of Sequences: 28952
Number of extensions: 205363
Number of successful extensions: 814
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 796
Number of HSP's gapped (non-prelim): 54
length of query: 269
length of database: 12,070,560
effective HSP length: 80
effective length of query: 189
effective length of database: 9,754,400
effective search space: 1843581600
effective search space used: 1843581600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
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