GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001915-TA|BGIBMGA001915-PA|IPR000243|Peptidase T1A,
proteasome beta-subunit, IPR006593|Cytochrome b561 / ferric reductase
transmembrane, IPR001353|20S proteasome, A and B subunits
         (424 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.2  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 197 VKILHLAVGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEV 248
           V   HL+  R   V Y ++ +   G  L ILA     L  E  +T KL+ ++
Sbjct: 276 VFFFHLSDVRYVMVVYLLKNVVLYGLELFILAKIVTDLCQEANSTKKLIVKI 327


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 168 ALAFTLVSFISGIIALFSSK 187
           A+    V F+ G++A+FS K
Sbjct: 188 AMLTNAVCFVPGVVAMFSRK 207


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 168 ALAFTLVSFISGIIALFSSK 187
           A+    V F+ G++A+FS K
Sbjct: 188 AMLTNAVCFVPGVVAMFSRK 207


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.132    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,547
Number of Sequences: 317
Number of extensions: 3792
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 424
length of database: 114,650
effective HSP length: 59
effective length of query: 365
effective length of database: 95,947
effective search space: 35020655
effective search space used: 35020655
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)