GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001915-TA|BGIBMGA001915-PA|IPR000243|Peptidase T1A,
proteasome beta-subunit, IPR006593|Cytochrome b561 / ferric reductase
transmembrane, IPR001353|20S proteasome, A and B subunits
         (424 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    94   6e-21
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   3.9  

>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 94.3 bits (224), Expect = 6e-21
 Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 22/184 (11%)

Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264
           G+L Q+EYA+ A++    S+GI A +G+++A E +  + L DE     K+  + + +   
Sbjct: 17  GKLVQIEYALAAVAAGAPSVGIKAVNGVVIATENKQKSILYDE-HSVHKVEMVTNHIGMI 75

Query: 265 VAGITSDANVLTNELRLIAQRYLLQYGESIPCK-------------------RPFGVSIL 305
            +G+  D  +L  + R +AQ Y L Y E IP                     RPFGVS+L
Sbjct: 76  YSGMGPDYRLLVKQARKLAQNYYLTYREPIPTSQLVQKVATVMQEYTQSGGVRPFGVSLL 135

Query: 306 YMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIK 365
             GWD    Y L+Q DPSG Y  WKAT +G N+    + L++ Y E +  L +A   AI 
Sbjct: 136 ICGWDDGRPY-LFQCDPSGAYFAWKATAMGKNANNGKTFLEKRYSE-DLELDDAVHTAIL 193

Query: 366 VLSK 369
            L +
Sbjct: 194 TLKE 197


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 114 RHNSWSSQLSKDSKRIIHGCLQLIGALFVLAG 145
           RH  W S  + D    +HG ++ +G + +  G
Sbjct: 138 RHEEWGSPRTCDRGEELHGMVEQLGLIVINQG 169


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.132    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 399,467
Number of Sequences: 2123
Number of extensions: 15076
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 3
length of query: 424
length of database: 516,269
effective HSP length: 66
effective length of query: 358
effective length of database: 376,151
effective search space: 134662058
effective search space used: 134662058
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)