BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001915-TA|BGIBMGA001915-PA|IPR000243|Peptidase T1A, proteasome beta-subunit, IPR006593|Cytochrome b561 / ferric reductase transmembrane, IPR001353|20S proteasome, A and B subunits (424 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (... 213 1e-55 At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) ... 116 4e-26 At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) ... 114 1e-25 At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2) ... 106 2e-23 At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1) 105 6e-23 At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putativ... 101 7e-22 At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (... 101 1e-21 At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 90 2e-18 At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 90 2e-18 At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 87 2e-17 At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) ... 82 8e-16 At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) ... 80 3e-15 At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 73 3e-13 At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1) (P... 47 2e-05 At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 33 0.36 At4g14800.1 68417.m02275 20S proteasome beta subunit D2 (PBD2) (... 33 0.48 At5g67280.1 68418.m08483 leucine-rich repeat transmembrane prote... 32 0.63 At1g04650.1 68414.m00462 hypothetical protein 32 0.63 At1g72480.1 68414.m08381 expressed protein 31 1.9 At5g23540.1 68418.m02763 26S proteasome regulatory subunit, puta... 30 3.4 At3g22630.1 68416.m02857 20S proteasome beta subunit D (PBD1) (P... 30 3.4 At5g47470.1 68418.m05862 nodulin MtN21 family protein integral m... 29 5.9 At4g26090.1 68417.m03756 disease resistance protein RPS2 (CC-NBS... 29 7.8 >At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (PRC9) identical to GB:AAC32057 from [Arabidopsis thaliana] (Genetics (1998) 149 (2), 677-692); identical to cDNA proteasome subunit prc9 GI:2511583 Length = 250 Score = 213 bits (521), Expect = 1e-55 Identities = 108/209 (51%), Positives = 144/209 (68%), Gaps = 20/209 (9%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 GRLYQVEYAMEAI +AG+++GIL+ DG++L E++ T+KLL +EK+YK++D + C+ Sbjct: 16 GRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACA 75 Query: 265 VAGITSDANVLTNELRLIAQRYLLQYGESIPCK-------------------RPFGVSIL 305 VAGI SDAN+L N R+ AQRY Y E +P + RPFGVS L Sbjct: 76 VAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFL 135 Query: 306 YMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIK 365 + GWDKH+G+QLY SDPSGNYGGWKA +G N+ AA S LKQ+YK+ + T EA LA+K Sbjct: 136 FAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKD-DATREEAVELALK 194 Query: 366 VLSKTLDMTKLTPEKVEMATLTRKDNKTI 394 VL+KT+D T LT EK+E+A + +KT+ Sbjct: 195 VLTKTMDSTSLTSEKLELAEVYLTPSKTV 223 >At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) identical to 20S proteasome subunit PAE2 GB:AAC32061 from [Arabidopsis thaliana] Length = 237 Score = 116 bits (278), Expect = 4e-26 Identities = 72/202 (35%), Positives = 116/202 (57%), Gaps = 26/202 (12%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 GRL+QVEYA+EAI T++G+ +G++LA E+R T+ LL E EKI +++D + C+ Sbjct: 19 GRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLL-EPSSVEKIMEIDDHIGCA 77 Query: 265 VAGITSDANVLTNELRLIAQRYLLQYGESIP--------C--------------KRPFGV 302 ++G+ +DA L R+ Q + YGE + C RPFGV Sbjct: 78 MSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGV 137 Query: 303 SILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQAL 362 S+L G D++ G LY +DPSG + A IG+ S A SSL++++ + + TL EA+ + Sbjct: 138 SLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNK-DITLQEAETI 195 Query: 363 AIKVLSKTLDMTKLTPEKVEMA 384 A+ +L + ++ K+TP V++A Sbjct: 196 AVSILKQVME-EKVTPNNVDIA 216 >At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) identical to 20S proteasome subunit PAE1 GI:3421087 from [Arabidopsis thaliana] Length = 237 Score = 114 bits (274), Expect = 1e-25 Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 26/202 (12%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 GRL+QVEYA+EAI T++G+ +G++LA E+R T+ LL E EKI +++D + C+ Sbjct: 19 GRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLL-EPSSVEKIMEIDDHIGCA 77 Query: 265 VAGITSDANVLTNELRLIAQRYLLQYGESIP--------C--------------KRPFGV 302 ++G+ +DA L R+ Q + YGE + C RPFGV Sbjct: 78 MSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGV 137 Query: 303 SILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQAL 362 S+L G D++ G LY +DPSG + A IG+ S A SSL++++ + + +L EA+ + Sbjct: 138 SLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNK-DLSLQEAETI 195 Query: 363 AIKVLSKTLDMTKLTPEKVEMA 384 A+ +L + ++ K+TP V++A Sbjct: 196 AVSILKQVME-EKVTPNNVDIA 216 >At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2) (PRS1) (PRC6) identical to SP|O24616 Proteasome subunit alpha type 7-2 (EC 3.4.25.1) (20S proteasome alpha subunit D2) {Arabidopsis thaliana} Length = 250 Score = 106 bits (255), Expect = 2e-23 Identities = 73/220 (33%), Positives = 119/220 (54%), Gaps = 28/220 (12%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 G L+QVEYA+EA+ ++G+ TD ++LA E+++T KL D + KI L++ + + Sbjct: 15 GHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRS-ARKIVSLDNHIALA 73 Query: 265 VAGITSDANVLTNELRLIAQ------------RYLLQYGESIPCK-------RPFGVSIL 305 AG+ +DA VL N+ R+ Q Y+ +Y + K RPFG+S L Sbjct: 74 CAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTL 133 Query: 306 YMGWDKHYGY-QLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAI 364 +G+D + LYQ+DPSG + WKA G NS + L++ YKE+ E LAI Sbjct: 134 IVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESSG--QETIKLAI 191 Query: 365 KVLSKTLDMTKLTPEKVEMATLTRKDNKTIIRILTNTEVE 404 + L L++ + + +E+A +TR++ T +R L E++ Sbjct: 192 RAL---LEVVESGGKNIEVAVMTREE--TGLRQLEEAEID 226 >At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1) Length = 250 Score = 105 bits (252), Expect = 6e-23 Identities = 71/220 (32%), Positives = 119/220 (54%), Gaps = 28/220 (12%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 G L+QVEYA+EA+ ++G+ TD ++LA E+++T KL D + KI L++ + + Sbjct: 15 GHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRS-ARKIVSLDNHIALA 73 Query: 265 VAGITSDANVLTNELRLIAQ------------RYLLQYGESIPCK-------RPFGVSIL 305 AG+ +DA VL N+ R+ Q Y+ +Y + K RPFG+S L Sbjct: 74 CAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTL 133 Query: 306 YMGWDKHYGYQ-LYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAI 364 +G+D + LYQ+DPSG + WKA G NS + L++ YKE+ E LAI Sbjct: 134 IVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAG--QETVKLAI 191 Query: 365 KVLSKTLDMTKLTPEKVEMATLTRKDNKTIIRILTNTEVE 404 + L L++ + + +E+A +TR++ +++ L E++ Sbjct: 192 RAL---LEVVESGGKNIEVAVMTREEG--VLKQLEEEEID 226 >At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putative nearly identical to SP|O23708 Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) {Arabidopsis thaliana} and to At1g16470 Length = 235 Score = 101 bits (243), Expect = 7e-22 Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 26/222 (11%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 G+L Q+E+A+ A+ TSLGI A++G+++A E++ + L+DE +KI L ++ Sbjct: 17 GKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASV-QKIQHLTPNIGTV 75 Query: 265 VAGITSDANVLTNELRLIAQRYLLQYGESIPCK-------------------RPFGVSIL 305 +G+ D VL + R A++YL Y E IP RPFGVS+L Sbjct: 76 YSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLL 135 Query: 306 YMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIK 365 G+D G QLYQ DPSG+Y WKA+ +G N + A + L++ Y E + L +A AI Sbjct: 136 VAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTE-DMELDDAIHTAIL 193 Query: 366 VLSKTLDMTKLTPEKVEMATLTRKDNKTIIRILTNTEVENSL 407 L + + +++ + +E+ + + R+LT E+++ L Sbjct: 194 TLKEGFE-GEISSKNIEIGKI---GTDKVFRVLTPAEIDDYL 231 >At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (PRC3) identical to proteasome subunit alpha type 2 SP:O23708, GI:6093778; identical to cDNA proteasome subunit prc3 GI:2511573 Length = 235 Score = 101 bits (241), Expect = 1e-21 Identities = 72/222 (32%), Positives = 119/222 (53%), Gaps = 26/222 (11%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 G+L Q+E+A+ A+ TSLGI A++G+++A E++ + L+DE +KI L ++ Sbjct: 17 GKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASV-QKIQHLTPNIGVV 75 Query: 265 VAGITSDANVLTNELRLIAQRYLLQYGESIPCK-------------------RPFGVSIL 305 +G+ D VL + R A++YL Y E IP RPFGVS+L Sbjct: 76 YSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLL 135 Query: 306 YMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIK 365 G+D G QLYQ DPSG+Y WKA+ +G N + A + L++ Y E + L +A AI Sbjct: 136 VAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTE-DMELDDAIHTAIL 193 Query: 366 VLSKTLDMTKLTPEKVEMATLTRKDNKTIIRILTNTEVENSL 407 L + + +++ + +E+ + + R+LT E+++ L Sbjct: 194 TLKEGFE-GEISSKNIEIGKI---GADKVFRVLTPAEIDDYL 231 >At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) (PRC1) identical to proteasome subunit alpha type 6-1 SP:O81146 GI:12643647 from [Arabidopsis thaliana]; identical to cDNA proteasome subunit prc1 GI:2511587 Length = 246 Score = 90.2 bits (214), Expect = 2e-18 Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 25/224 (11%) Query: 205 GRLYQVEYAMEAISHAG-TSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVC 263 GRL+QVEYA +A+ AG TS+G+ D + + +++ +KLLD+ + ++ + + Sbjct: 20 GRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTH-LFPITKYIGL 78 Query: 264 SVAGITSDANVLTNELRLIAQRYLLQYGESIPCK-------------------RPFGVSI 304 GIT+DA L + R A + YG +P RP GV Sbjct: 79 VATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVA 138 Query: 305 LYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENET-TLAEAQALA 363 + MG D+ G LY+ DP+G++ G KAT G AV+ L+++ KEN + T E A Sbjct: 139 MVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTA 198 Query: 364 IKVLSKTLDMTKLTPEKVEMATLTRKDNKTIIRILTNTEVENSL 407 I L L ++E+ + R +N R LT E+E L Sbjct: 199 ISALQSVL-QEDFKATEIEVG-VVRAENPE-FRALTTEEIEEHL 239 >At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein Lycopersicon esculentum, proline-rich cell wall protein [Medicago sativa] GI:3818416; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family Length = 428 Score = 90.2 bits (214), Expect = 2e-18 Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 5/121 (4%) Query: 253 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIP--CKRPFGVSILYMGWD 310 K +L +V + + D VL E ++ ++ LLQ S+ K V+ GWD Sbjct: 305 KFLQLLAMLVLPLEFLAKDGVVLVGEKKVTSK--LLQTSSSMEKMYKIDDHVACAVAGWD 362 Query: 311 KHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIKVLSKT 370 +++G+QLY SDPSGNYGGW+A +G N+ AA S LKQ+YK+ + T E LAIKVLSKT Sbjct: 363 RNHGFQLYMSDPSGNYGGWQAAAVGANNQAAQSILKQDYKD-DATREEVVQLAIKVLSKT 421 Query: 371 L 371 + Sbjct: 422 M 422 Score = 45.2 bits (102), Expect = 8e-05 Identities = 20/44 (45%), Positives = 30/44 (68%) Query: 224 LGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCSVAG 267 L LA DG++L E++ T+KLL EK+YK++D + C+VAG Sbjct: 317 LEFLAKDGVVLVGEKKVTSKLLQTSSSMEKMYKIDDHVACAVAG 360 >At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) identical to GB:AF043519 Length = 246 Score = 87.0 bits (206), Expect = 2e-17 Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 25/224 (11%) Query: 205 GRLYQVEYAMEAISHAG-TSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVC 263 GRL+QVEYA +A+ AG TS+G+ D + + +++ +KLLD+ S ++ + + Sbjct: 20 GRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSH-LFPVTKYLGL 78 Query: 264 SVAGITSDANVLTNELRLIAQRYLLQYGESIPC-------------------KRPFGVSI 304 G+T+D+ L + R A + QYG +P RP GV Sbjct: 79 LATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVA 138 Query: 305 LYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENET-TLAEAQALA 363 + +G D+ G LY+ DP+G++ G KAT G AV+ L+++ KEN T E A Sbjct: 139 MVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTA 198 Query: 364 IKVLSKTLDMTKLTPEKVEMATLTRKDNKTIIRILTNTEVENSL 407 I L L ++E+ + D + R L E++ L Sbjct: 199 ISALQSVL-QEDFKATEIEVGVVRADD--PLFRSLRTEEIDEHL 239 >At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) (PRC2B) (PRS1) identical to GB:AAC32063 from [Arabidopsis thaliana] (Genetics 149 (2), 677-692 (1998)); identical to cDNA proteasome subunit prc2b GI:2511585 Length = 277 Score = 81.8 bits (193), Expect = 8e-16 Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 24/187 (12%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 GRL+QVEYAMEA+ ++G+ + ++LA + ++L KI+K++D + + Sbjct: 17 GRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSH---QRKIFKVDDHIGVA 73 Query: 265 VAGITSDANVLTNELRLIAQRYLLQYGESIP--------------C-----KRPFGVSIL 305 +AG+T+D VL+ +R + + Y +P C KRP+GV +L Sbjct: 74 IAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLL 133 Query: 306 YMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKE-NETTLAEAQALAI 364 G D+ G LY + PSGNY ++A IG+ S AA + L+++++ E++ + AI Sbjct: 134 VGGLDES-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQESSKEDLIKDAI 192 Query: 365 KVLSKTL 371 + +TL Sbjct: 193 MAIRETL 199 >At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) (gb|AAC32062.1) Length = 278 Score = 79.8 bits (188), Expect = 3e-15 Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 23/165 (13%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 GRL+QVEYAMEA+ ++G+ + ++LA + ++L KI+K++D + + Sbjct: 17 GRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSH---QRKIFKVDDHIGVA 73 Query: 265 VAGITSDANVLTNELRLIAQRYLLQYGESIP--------------C-----KRPFGVSIL 305 +AG+T+D VL+ +R + + Y +P C KRP+GV +L Sbjct: 74 IAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLL 133 Query: 306 YMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 350 G D+ G LY + PSGNY ++A IG+ S AA + L++ ++ Sbjct: 134 VGGLDES-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 177 >At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (PRC8) identical to proteasome subunit alpha type 3 SP:O23715, GI:12644056 from [Arabidopsis thaliana]; identical to cDNA proteasome subunit prc8 GI:2511591 Length = 249 Score = 73.3 bits (172), Expect = 3e-13 Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 22/207 (10%) Query: 205 GRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCS 264 GR++Q+EYA +A+ ++GT +GI DGI++ E+ +K++ + +I+ ++ + Sbjct: 19 GRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMM-LPGSNRRIHSVHRHAGMA 77 Query: 265 VAGITSDANVLTNELRLIAQRYLLQYGESIPCK-------------------RPFGVSIL 305 VAG+ +D + + A+ Y YG+++P K RPFG ++ Sbjct: 78 VAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVI 137 Query: 306 YMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIK 365 G+D+ G QLY +PSG + IG AA + + ++ +E T E K Sbjct: 138 LGGYDRD-GPQLYMIEPSGISYRYFGAAIGKGKQAAKTEI-EKLNLSEMTCKEGVIEVAK 195 Query: 366 VLSKTLDMTKLTPEKVEMATLTRKDNK 392 ++ K D K ++EM+ + + + Sbjct: 196 IIYKLHDEAKDKAFELEMSWICEESKR 222 >At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1) (PRCD) identical to cDNA proteasome subunit prcd GI:2511593 Length = 233 Score = 47.2 bits (107), Expect = 2e-05 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 15/161 (9%) Query: 222 TSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCSVAGITSDANVLTNELRL 281 T +G+ G++L A+ R + + S+KI +L D++ +G +D+ V+++ +R Sbjct: 14 TIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRY 73 Query: 282 IAQRYLLQYGESIPC--------------KRPFGVSILYMGWDKHYGYQLYQSDPSGNYG 327 ++ +Q+G+ K ++ GWDK+ G ++Y G Sbjct: 74 FLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVV 133 Query: 328 GWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIKVLS 368 G+ S+ Q +K+N T EA+ L +K +S Sbjct: 134 EQPFAIGGSGSSYLYGFFDQAWKDN-MTKEEAEQLVVKAVS 173 >At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) family protein low similarity to polycomb-M33 interacting protein Ring1B [Mus musculus] GI:2239142; contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger) Length = 427 Score = 33.1 bits (72), Expect = 0.36 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 7/93 (7%) Query: 327 GGWKA-TCIGNNSAAAVSSLKQEYKENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMAT 385 GG ++ T GNN+ A+S K L + +++ +++ L KL E+VE+ Sbjct: 318 GGTRSNTRQGNNNQGAISKRNARLKRLVEYLGSLEGNSVEYVARHL---KLKAEEVEL-- 372 Query: 386 LTRKDNKTIIRILTNTEVENSLPNSKR-PKLKL 417 L KD T+I T+TE SL + + KLK+ Sbjct: 373 LVSKDGDTVIGNKTSTEKMQSLQDDETVAKLKV 405 >At4g14800.1 68417.m02275 20S proteasome beta subunit D2 (PBD2) (PRCGA) identical to SP|O24633 Proteasome subunit beta type 2-2 (EC 3.4.25.1) (20S proteasome alpha subunit D2) {Arabidopsis thaliana}, cDNA proteasome subunit prcga GI:2511571 Length = 199 Score = 32.7 bits (71), Expect = 0.48 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Query: 297 KRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTL 356 K P+ V+IL G+DK G LY D G S ++S++ + Y+ ++ ++ Sbjct: 94 KNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYR-SDMSV 152 Query: 357 AEAQALAIKVLSKTLDMTKLTP 378 EA L K + + + P Sbjct: 153 EEAIELVDKCILEIRSRLVIAP 174 >At5g67280.1 68418.m08483 leucine-rich repeat transmembrane protein kinase, putative Length = 751 Score = 32.3 bits (70), Expect = 0.63 Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 4/52 (7%) Query: 222 TSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCSVAGITSDAN 273 TSL L TDG+LL + R + ++D+ + + ++ +D+ CS G+T DA+ Sbjct: 27 TSLA-LTTDGVLLLSFRYS---IVDDPLYVFRSWRFDDETPCSWRGVTCDAS 74 >At1g04650.1 68414.m00462 hypothetical protein Length = 936 Score = 32.3 bits (70), Expect = 0.63 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 367 LSKTLDMTKLTPEKVEMATLTRKDN--KTIIRILTNTEVENSLPNSKRPKLKLKLPETAC 424 L K + +TP + E+ L+++ K ++ L + S+ KRP K KLPE C Sbjct: 821 LEKEQALLSITPSEEELELLSKEGTEVKATVQKLLEGRSQRSMEVEKRPNKKRKLPEGIC 880 >At1g72480.1 68414.m08381 expressed protein Length = 509 Score = 30.7 bits (66), Expect = 1.9 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Query: 39 ESGDLYNSSWDSAWRSICQLFNLLQHMQVAIVVFSLW 75 +S D+YN W +AW I F L + IV+ SLW Sbjct: 407 KSKDVYNEHWQNAW--IIPAFWQLLSFSLLIVICSLW 441 >At5g23540.1 68418.m02763 26S proteasome regulatory subunit, putative similar to 26S proteasome-associated pad1 homolog [Homo sapiens] GI:1923256, 26S proteasome, non-ATPase subunit [Mus musculus] GI:2505940; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family Length = 308 Score = 29.9 bits (64), Expect = 3.4 Identities = 15/43 (34%), Positives = 24/43 (55%) Query: 350 KENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMATLTRKDNK 392 K NE T+ E +LA K + +L+PEK+ + + R+D K Sbjct: 238 KTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAK 280 >At3g22630.1 68416.m02857 20S proteasome beta subunit D (PBD1) (PRGB) identical to GB:CAA74026 from [Arabidopsis thaliana] ( FEBS Lett. (1997) 416 (3), 281-285); identical to cDNA proteasome subunit prgb GI:2511589 Length = 204 Score = 29.9 bits (64), Expect = 3.4 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 297 KRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTL 356 K P+ V+IL G+D G LY D G S ++S++ + Y+ ++ ++ Sbjct: 94 KNPYSVNILMAGYDDESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYR-SDMSV 152 Query: 357 AEAQALAIKVL 367 EA L K + Sbjct: 153 EEAIELVDKCI 163 >At5g47470.1 68418.m05862 nodulin MtN21 family protein integral membrane protein domain (PF00892); similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula] Length = 364 Score = 29.1 bits (62), Expect = 5.9 Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Query: 125 DSKRIIHGCLQLIGALFVLAGTFLALAEVNMQINTAHGICGVIALAFTLVSFISGIIALF 184 D +++ GC+ L+GA+FVL+ + A + + + AL L++ + ++ L Sbjct: 193 DRDKVV-GCIYLLGAVFVLSTNVVLQASTLAEFPAPISLSAITALLGVLITTV--VLLLQ 249 Query: 185 SSKVRLMVKS 194 + K +++ S Sbjct: 250 NRKTKVLASS 259 >At4g26090.1 68417.m03756 disease resistance protein RPS2 (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. identical to RPS2 (gi:13661831) Length = 909 Score = 28.7 bits (61), Expect = 7.8 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 325 NYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIKVLSKTL 371 +Y GW+ G + A + EY EN TTL L+++ L KTL Sbjct: 639 SYAGWELQSFGEDEAEELGFADLEYLENLTTLG-ITVLSLETL-KTL 683 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.319 0.132 0.384 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,413,786 Number of Sequences: 28952 Number of extensions: 370696 Number of successful extensions: 994 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 940 Number of HSP's gapped (non-prelim): 37 length of query: 424 length of database: 12,070,560 effective HSP length: 83 effective length of query: 341 effective length of database: 9,667,544 effective search space: 3296632504 effective search space used: 3296632504 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 61 (28.7 bits)
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