GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001914-TA|BGIBMGA001914-PA|IPR004877|Cytochrome b561,
IPR006593|Cytochrome b561 / ferric reductase transmembrane
         (237 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   0.90 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.8  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 65  TNNLKQHIYLCVTGYVILMSQAILTFSPNNGWTNSLKYPN 104
           TNN     Y+C T  VI+    +  +S  N W     Y N
Sbjct: 33  TNNEVPRWYICYTIGVIITIGCLCIWSIFNKWNQFRSYSN 72


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 63  HGTNNLKQHIYLCVTGYVILMSQAILTFSPNNGWT 97
           H  N + +     V   + L+SQA+ TF+   GWT
Sbjct: 180 HQKNFINESNVETVKFNLFLLSQAVETFNDIFGWT 214


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 52 ALSAFIFANVFHGTNNLKQHIYLCVT 77
          A + F+   +F+    +KQHIY  ++
Sbjct: 10 AAAVFLLFYLFYCYKTIKQHIYSLIS 35


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
          monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 52 ALSAFIFANVFHGTNNLKQHIYLCVT 77
          A + F+   +F+    +KQHIY  ++
Sbjct: 10 AAAVFLLFYLFYCYKTIKQHIYSLIS 35


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.137    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,156
Number of Sequences: 317
Number of extensions: 1208
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 237
length of database: 114,650
effective HSP length: 55
effective length of query: 182
effective length of database: 97,215
effective search space: 17693130
effective search space used: 17693130
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 42 (21.0 bits)