BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001914-TA|BGIBMGA001914-PA|IPR004877|Cytochrome b561, IPR006593|Cytochrome b561 / ferric reductase transmembrane (237 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0099 - 25816029-25816337,25816825-25817027,25817108-258171... 30 1.9 09_02_0156 + 5070962-5072351,5072466-5073139 28 7.6 02_01_0453 + 3255106-3256062,3256140-3256301,3256394-3256762 28 7.6 >02_05_0099 - 25816029-25816337,25816825-25817027,25817108-25817156, 25818274-25818417 Length = 234 Score = 29.9 bits (64), Expect = 1.9 Identities = 35/143 (24%), Positives = 52/143 (36%), Gaps = 13/143 (9%) Query: 62 FHGTN-NL--KQHIYLCVTGYVILMSQAILTFSPNNGWTNSLKYPNKKMVHWVMQVXXXX 118 F TN NL H L + GY+IL S+AI+ + W K+ K++H ++ Sbjct: 38 FEATNKNLIFNVHPVLMLIGYIILGSEAIMVYKVLPTW----KHDTTKLIHLILHAIALV 93 Query: 119 XXXXXXXXRFTNLNE----HMQXXXXXXXXXXXXXXXXSLIGGVVNLIFPKQTSALILRS 174 F NE ++ I G V FP+ + ++ Sbjct: 94 FGAVGIYCAFKFHNESGIANLYSLHSWLGIGTICLYGIQWIFGFVAFFFPRASPSVRKGV 153 Query: 175 L--HACFGLLTVSVAFICLCLGF 195 L H FGL +A LGF Sbjct: 154 LPWHILFGLFVYILALATAELGF 176 >09_02_0156 + 5070962-5072351,5072466-5073139 Length = 687 Score = 27.9 bits (59), Expect = 7.6 Identities = 13/33 (39%), Positives = 19/33 (57%) Query: 203 MGDVNANLSIAFTVMALIGVLSSAVSNLTRRYM 235 +G N NLS + MA +G S+A + TR Y+ Sbjct: 273 LGSANRNLSSVLSEMAYVGFSSAAGRDNTRHYI 305 >02_01_0453 + 3255106-3256062,3256140-3256301,3256394-3256762 Length = 495 Score = 27.9 bits (59), Expect = 7.6 Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 55 AFIFANVFHGTNNLKQHIYLCVTG 78 AF+ +N+F T + +H+YLC G Sbjct: 265 AFLCSNIFGSTADCVEHLYLCSGG 288 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.328 0.137 0.406 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 4,181,109 Number of Sequences: 37544 Number of extensions: 120728 Number of successful extensions: 322 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 320 Number of HSP's gapped (non-prelim): 3 length of query: 237 length of database: 14,793,348 effective HSP length: 80 effective length of query: 157 effective length of database: 11,789,828 effective search space: 1851002996 effective search space used: 1851002996 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.8 bits) S2: 59 (27.9 bits)
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