BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001914-TA|BGIBMGA001914-PA|IPR004877|Cytochrome b561, IPR006593|Cytochrome b561 / ferric reductase transmembrane (237 letters) Database: human 224,733 sequences; 73,234,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC047691-1|AAH47691.1| 222|Homo sapiens cytochrome b-561 domain... 39 0.018 AF040704-1|AAC70911.1| 222|Homo sapiens putative tumor suppress... 39 0.018 AC002481-2|AAB67309.1| 222|Homo sapiens WUGSC:H_LUCA12.2 protein. 39 0.018 >BC047691-1|AAH47691.1| 222|Homo sapiens cytochrome b-561 domain containing 2 protein. Length = 222 Score = 38.7 bits (86), Expect = 0.018 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 51 VALSAFIFANVFH--GTNNLKQHIYLCVTGYVILMSQAILTFSPNNGWTNSLKYPNKKMV 108 VAL IF V G++ H L + LM++A+L FSP + +SL + Sbjct: 26 VALGFTIFVAVLARPGSSLFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARC 85 Query: 109 HWVMQV 114 HWV+Q+ Sbjct: 86 HWVLQL 91 >AF040704-1|AAC70911.1| 222|Homo sapiens putative tumor suppressor protein protein. Length = 222 Score = 38.7 bits (86), Expect = 0.018 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 51 VALSAFIFANVFH--GTNNLKQHIYLCVTGYVILMSQAILTFSPNNGWTNSLKYPNKKMV 108 VAL IF V G++ H L + LM++A+L FSP + +SL + Sbjct: 26 VALGFTIFVAVLARPGSSLFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARC 85 Query: 109 HWVMQV 114 HWV+Q+ Sbjct: 86 HWVLQL 91 >AC002481-2|AAB67309.1| 222|Homo sapiens WUGSC:H_LUCA12.2 protein. Length = 222 Score = 38.7 bits (86), Expect = 0.018 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 51 VALSAFIFANVFH--GTNNLKQHIYLCVTGYVILMSQAILTFSPNNGWTNSLKYPNKKMV 108 VAL IF V G++ H L + LM++A+L FSP + +SL + Sbjct: 26 VALGFTIFVAVLARPGSSLFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARC 85 Query: 109 HWVMQV 114 HWV+Q+ Sbjct: 86 HWVLQL 91 Database: human Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 73,234,838 Number of sequences in database: 224,733 Lambda K H 0.328 0.137 0.406 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,869,544 Number of Sequences: 224733 Number of extensions: 657837 Number of successful extensions: 4082 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 4079 Number of HSP's gapped (non-prelim): 3 length of query: 237 length of database: 73,234,838 effective HSP length: 88 effective length of query: 149 effective length of database: 53,458,334 effective search space: 7965291766 effective search space used: 7965291766 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.8 bits) S2: 64 (29.9 bits)
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