Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001912-TA|BGIBMGA001912-PA|undefined
(104 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 28 0.26
SPAC688.08 |srb8|med12|mediator complex subunit Srb8 |Schizosacc... 26 1.4
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 25 2.4
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 25 3.2
SPBC13A2.03 |||phosphatidate cytidylyltransferase|Schizosaccharo... 25 3.2
SPAC20H4.02 |||conserved fungal protein|Schizosaccharomyces pomb... 24 4.3
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 24 4.3
SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 24 4.3
SPAC19D5.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 5.6
SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces pomb... 24 5.6
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 23 7.4
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 23 9.8
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 23 9.8
SPAPB1A10.07c |||sphingolipid biosynthesis protein|Schizosacchar... 23 9.8
SPAC27F1.08 |pdt1||Nramp family manganese ion transporter|Schizo... 23 9.8
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 28.3 bits (60), Expect = 0.26
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 15 YSLFLAYSVFVGIIGSFITIYLFSKRWKFEDSMIGVIACFSRILASIVYAVAPNRTV 71
YS+F A SVF ++G FI ++ + KFE + + + I + V P T+
Sbjct: 187 YSVFYA-SVFYILLGVFIRVFYLVNKEKFEKKELAFLFSSIVVACLIQFNVLPLGTI 242
>SPAC688.08 |srb8|med12|mediator complex subunit Srb8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1233
Score = 25.8 bits (54), Expect = 1.4
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 23 VFVGIIGSFITIYLFSKRWKFEDSMIGVIACFSRILASIVYAVAPNRTVYFLGPVLDMFS 82
V G + SFI+ +L + + F D ++ F R+LA + V+P +FL L + S
Sbjct: 212 VAAGFLISFISSFLNADIYSFADDYTYLLKLFGRLLAEEL--VSPK---HFL---LRIVS 263
Query: 83 SAGATSLRSLA 93
+G +SL+S +
Sbjct: 264 FSGDSSLKSFS 274
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 25.0 bits (52), Expect = 2.4
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 42 KFEDSMIGVIACFSRILASIVYAVAPNRTVYFLGPVLDMFSSAGATSLRSLASKLVDSDE 101
KFE+ + IA F +I + + + N+T L ++ S+ + S L S SD
Sbjct: 26 KFEELLDARIAAFQQIESPVTGTLNSNKTTEGEEAKLSIYDSSHSISKSQLESVKKISDI 85
Query: 102 VGF 104
G+
Sbjct: 86 TGY 88
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 24.6 bits (51), Expect = 3.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 9 KFTDIDYSLFLAYSVFVGI 27
KFTDIDY +F S +V I
Sbjct: 463 KFTDIDYFVFSDASKYVSI 481
>SPBC13A2.03 |||phosphatidate
cytidylyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 24.6 bits (51), Expect = 3.2
Identities = 11/45 (24%), Positives = 26/45 (57%)
Query: 57 ILASIVYAVAPNRTVYFLGPVLDMFSSAGATSLRSLASKLVDSDE 101
+L + VY++ + V + + + S G TS++++ SKL+ + +
Sbjct: 395 LLDTAVYSLTTTQQVQLVEDLQNYLISHGKTSVQAICSKLLQNSK 439
>SPAC20H4.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 250
Score = 24.2 bits (50), Expect = 4.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 15 YSLFLAYSVFVGIIGSFITIYLFSKRW 41
+SL + S+ VGII +F L S RW
Sbjct: 224 FSLRMQLSILVGIICNFAYGLLHSYRW 250
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 24.2 bits (50), Expect = 4.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 15 YSLFLAYSVFVGIIGSFITIY 35
YS FL + F+ I+G+FI ++
Sbjct: 189 YSPFLWFYFFITIVGNFIPLF 209
>SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 546
Score = 24.2 bits (50), Expect = 4.3
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 2 LFTRYKHKFTDIDYSLFLAYSVFVG-IIGSFITIYLFSKRWKFEDSMIGVIA 52
LFT + + + F +G IIG FIT RW F +MI A
Sbjct: 223 LFTPVQRTYVLPGFCTFPYLGPIIGPIIGDFITQSYLEWRWTFWINMIWAAA 274
>SPAC19D5.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 87
Score = 23.8 bits (49), Expect = 5.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Query: 15 YSLFLAYSVFVGIIGSFITIYLFSKRWKFEDSMIGVIACFSRIL 58
YS+ L YSV I+GS T ++ DS IGV + +SR L
Sbjct: 25 YSIALCYSVQGRILGSSTTNFV-------HDSTIGVKSSWSRHL 61
>SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 162
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 19 LAYSVFVGIIGSFITIYLFSKRWKFEDSMIGVIACFSRILASIVY 63
L VF G+ F+ +L + + D + ++ C +L +I+Y
Sbjct: 73 LVCGVFGGLGSEFVQSFLTYRTFDLFDIVANLLGCSLALLLNILY 117
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 23.4 bits (48), Expect = 7.4
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 9 KFTDIDYSLFLAYSVFVGIIGSFITIYLFSKRWKFEDSMIGVIACFSRILASIVY 63
+F + + ++L Y + ++ S + + S+ + M V ACF L +VY
Sbjct: 124 RFGKLGHCVYLFYCISTNVLVSSLLLLGGSQGFSSTTGMNTVAACFLLPLGVMVY 178
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 23.0 bits (47), Expect = 9.8
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 68 NRTVYFLGPVLDMFSSAGATSLRSLASK 95
N + +GP++D++ A L +L K
Sbjct: 1463 NAQLITIGPIIDLYGKFAAEKLNALMKK 1490
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 23.0 bits (47), Expect = 9.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 63 YAVAPNRTVYFLGPV 77
Y PNRT+Y L PV
Sbjct: 202 YQDNPNRTIYSLSPV 216
>SPAPB1A10.07c |||sphingolipid biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 23.0 bits (47), Expect = 9.8
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 6 YKHKFTDIDYSLFLAYSVFVGIIGSFITIYLFSKRWKFEDSMIGVIACFSRILASIVYAV 65
++ FT + + LFLA+ + + S + I + + W F+ + V+ FS +
Sbjct: 95 HRLSFTLVMFHLFLAFILSLCNTRSRVAIKIQNGLWPFKIVLWFVLGIFSFFI------- 147
Query: 66 APNRTVYFLGPVLDMFSSA 84
P + + F G ++ + SA
Sbjct: 148 -PTKFLSFWGNIISVMGSA 165
>SPAC27F1.08 |pdt1||Nramp family manganese ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 521
Score = 23.0 bits (47), Expect = 9.8
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 11 TDIDYSLFLAYSVFVGIIGSFITIYLFSKRWKFEDSMIGVIACFSRILASIVYAVA 66
T + + + + G++ + + + L W+ E SM+ V F +A +V VA
Sbjct: 169 TAVALKILMHIPLVAGVVITILDVLLVLIAWRPEGSMLSV-RIFETAVALLVLVVA 223
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.330 0.142 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,536
Number of Sequences: 5004
Number of extensions: 16384
Number of successful extensions: 60
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 16
length of query: 104
length of database: 2,362,478
effective HSP length: 63
effective length of query: 41
effective length of database: 2,047,226
effective search space: 83936266
effective search space used: 83936266
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 47 (23.0 bits)
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