GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (328 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   4.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   4.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   4.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   7.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.4  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 223 VLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
           ++ LSK +G+A      SN  Y  + +     Y   FI + +
Sbjct: 13  IILLSKILGIAPISYKNSNVNYSKIGIVQTVAYFVIFIILTI 54


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 95  IMQGRTQNYTEQEKKVQRMVTTMSSWSSPLQTAPP 129
           + +  T  Y E  + +  +    S W+ P   APP
Sbjct: 27  LQEKTTYEYYENNQALPPITYPPSDWNCPQYNAPP 61


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 220 VTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFI 254
           V  V  LS+ +G  + G+    FG+  VF+T  F+
Sbjct: 215 VIEVRKLSRLLG-EMVGLFNDIFGWPLVFITGRFV 248


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 95  IMQGRTQNYTEQEKKVQRMVTTMSSWSSPLQTAPP 129
           + +  T  Y E  + +  +    S W+ P   APP
Sbjct: 18  LQEKTTYEYYENNQALPPITYPPSDWNCPQYNAPP 52


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 247 VFVTACFIYMFGFIYILLRI 266
           VF+T  F+ + G +Y+ L I
Sbjct: 219 VFITINFVVLLGDLYVTLYI 238


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 39  KESLKKIWRLRTKITVEPFV 58
           K+ ++   RLR +I V+PF+
Sbjct: 168 KKDIESALRLREEIKVDPFM 187


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,730
Number of Sequences: 317
Number of extensions: 2278
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 6
length of query: 328
length of database: 114,650
effective HSP length: 57
effective length of query: 271
effective length of database: 96,581
effective search space: 26173451
effective search space used: 26173451
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 43 (21.4 bits)