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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (328 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ...    29   0.91 
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce...    29   0.91 
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p...    28   1.6  
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc...    28   2.1  
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ...    27   3.7  
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch...    27   3.7  
SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces pombe...    26   6.4  
SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces pombe...    26   6.4  
SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces pombe...    26   6.4  
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|...    26   6.4  
SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces pombe...    26   6.4  
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c...    26   8.5  
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ...    26   8.5  
SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pomb...    26   8.5  

>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 557

 Score = 29.1 bits (62), Expect = 0.91
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 201 YSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFI 260
           Y+ ++D  S S    R G++T ++ +    G  +S   T   G +   +  C IY+ G I
Sbjct: 44  YNPVTDTYSYSSA--RQGLITGMVNVGSFFGCLISSPTTDRIGKRNSIIGFCVIYLIGVI 101


>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 462

 Score = 29.1 bits (62), Expect = 0.91
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 3/108 (2%)

Query: 157 KLISAIGVMLSAVFFRQVGMNETXXXXXXXXXXXXXRVAMTMAVYS-YISDITSESERTF 215
           +++  +G ++  VF    G+  T               A  M + S  ISD+ +  ER  
Sbjct: 112 RMLLQVGNVIFIVFNMACGLARTKAQMYIFRFLAGFGSATPMGLGSGTISDLFTPDERGK 171

Query: 216 RIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFIYIL 263
            + +++    L   +G  +SG +     YK +F +       GFI+ L
Sbjct: 172 AVAVMSLAPLLGPTIGPVVSGFIAEYTTYKWIFWSTTI--FSGFIFAL 217


>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 531

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 201 YSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFI 260
           Y  I+D  S S    R G++T ++ +    G  +S  +   FG +   +  C +Y+ G I
Sbjct: 48  YDPITDQYSLSSA--RQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGII 105


>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5
          |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 630

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 25 SKEINTENKLSRDLKESLKKIWRLRTKI 52
          S  ++ + KL  DLK  +KK+ RLR +I
Sbjct: 24 SNSVSQKEKLEGDLKTQIKKLQRLRDQI 51


>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
            Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1894

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 47   RLRTKITVEPFVICYVLPSVLAGLAVQNMCLEKSCLVNLQYDEETCRHIMQGRTQNYTE 105
            RLR KI      + ++L      L +  + + K  L N + D      +MQ R  N+TE
Sbjct: 1826 RLRKKIVQRYGTMFFLLLIAFLALIIIPLVVAKDLLANFEMDILRTYGLMQPRDTNWTE 1884


>SPAC26H5.04 |||vacuolar import and degradation protein
           Vid28|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 729

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)

Query: 281 CVSLFSLSDLVATVKVGFKAREGTHRVQVILILICYML 318
           C+ L S+S LV   K G  ++  T  +Q+I+  I   L
Sbjct: 302 CIRLLSISCLVTLYKAGILSKNQTKEIQMIVTPILIRL 339


>SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 230 VGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
           +G  LS  +  NF + A ++  C   MFGF  + L
Sbjct: 21  MGTGLSANVLHNFPFAARWLRICSYIMFGFALVCL 55


>SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 230 VGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
           +G  LS  +  NF + A ++  C   MFGF  + L
Sbjct: 21  MGTGLSANVLHNFPFAARWLRICSYIMFGFALVCL 55


>SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 230 VGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
           +G  LS  +  NF + A ++  C   MFGF  + L
Sbjct: 21  MGTGLSANVLHNFPFAARWLRICSYIMFGFALVCL 55


>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
           Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1328

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 59  ICYVLPSVLAGLAVQNMCLEKSCLVNLQYDE 89
           +CY LP+V+ G A + + L  S L++L  D+
Sbjct: 549 LCYQLPAVIEGGASRGVTLVISPLLSLMQDQ 579


>SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 230 VGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
           +G  LS  +  NF + A ++  C   MFGF  + L
Sbjct: 21  MGTGLSANVLHNFPFAARWLRICSYIMFGFALVCL 55


>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 519

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 204 ISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAV 247
           +SD   +  +     +V+ V+  S  +GL ++G + ++  +K V
Sbjct: 423 LSDFVPKQHQGIAASLVSTVVNYSISIGLGIAGTVETHLNHKGV 466


>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 547

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 201 YSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFI 260
           Y+ ++D  S S    R G++T ++ +    G  LS  +    G +   +    +Y+ G I
Sbjct: 44  YNPVTDTYSYSSA--RQGLITGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGII 101


>SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 983

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 16/101 (15%)

Query: 16  EPCKCNKQYSKEINTENKLSR------DLKESLKKIWRLRTKITVEP----FVICYVLPS 65
           EP    K YS  ++ +N +S        L+ S+  IWR  TK+++ P    F+ C  L  
Sbjct: 34  EPGFFGKLYSIFLDKQNDMSLRWIAIIQLRNSIDIIWRKNTKMSLLPEERDFIRCNALLG 93

Query: 66  VLAG---LAVQNMCLEKSCLVNLQYDEE--TCRHIMQGRTQ 101
            +     L++QN  L  S +  L Y  E  +  H + G+ Q
Sbjct: 94  SIKSENLLSIQN-ALVVSRIARLDYPTEWPSLFHDLLGKLQ 133


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.325    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,248,997
Number of Sequences: 5004
Number of extensions: 45000
Number of successful extensions: 180
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 168
Number of HSP's gapped (non-prelim): 14
length of query: 328
length of database: 2,362,478
effective HSP length: 73
effective length of query: 255
effective length of database: 1,997,186
effective search space: 509282430
effective search space used: 509282430
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 54 (25.8 bits)

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