Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
(328 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 29 0.91
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 29 0.91
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 28 1.6
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 28 2.1
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 27 3.7
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 27 3.7
SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces pombe... 26 6.4
SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces pombe... 26 6.4
SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces pombe... 26 6.4
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 26 6.4
SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces pombe... 26 6.4
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 26 8.5
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 26 8.5
SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pomb... 26 8.5
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 201 YSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFI 260
Y+ ++D S S R G++T ++ + G +S T G + + C IY+ G I
Sbjct: 44 YNPVTDTYSYSSA--RQGLITGMVNVGSFFGCLISSPTTDRIGKRNSIIGFCVIYLIGVI 101
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 29.1 bits (62), Expect = 0.91
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 157 KLISAIGVMLSAVFFRQVGMNETXXXXXXXXXXXXXRVAMTMAVYS-YISDITSESERTF 215
+++ +G ++ VF G+ T A M + S ISD+ + ER
Sbjct: 112 RMLLQVGNVIFIVFNMACGLARTKAQMYIFRFLAGFGSATPMGLGSGTISDLFTPDERGK 171
Query: 216 RIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFIYIL 263
+ +++ L +G +SG + YK +F + GFI+ L
Sbjct: 172 AVAVMSLAPLLGPTIGPVVSGFIAEYTTYKWIFWSTTI--FSGFIFAL 217
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 201 YSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFI 260
Y I+D S S R G++T ++ + G +S + FG + + C +Y+ G I
Sbjct: 48 YDPITDQYSLSSA--RQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGII 105
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 25 SKEINTENKLSRDLKESLKKIWRLRTKI 52
S ++ + KL DLK +KK+ RLR +I
Sbjct: 24 SNSVSQKEKLEGDLKTQIKKLQRLRDQI 51
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 47 RLRTKITVEPFVICYVLPSVLAGLAVQNMCLEKSCLVNLQYDEETCRHIMQGRTQNYTE 105
RLR KI + ++L L + + + K L N + D +MQ R N+TE
Sbjct: 1826 RLRKKIVQRYGTMFFLLLIAFLALIIIPLVVAKDLLANFEMDILRTYGLMQPRDTNWTE 1884
>SPAC26H5.04 |||vacuolar import and degradation protein
Vid28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 729
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 281 CVSLFSLSDLVATVKVGFKAREGTHRVQVILILICYML 318
C+ L S+S LV K G ++ T +Q+I+ I L
Sbjct: 302 CIRLLSISCLVTLYKAGILSKNQTKEIQMIVTPILIRL 339
>SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 230 VGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
+G LS + NF + A ++ C MFGF + L
Sbjct: 21 MGTGLSANVLHNFPFAARWLRICSYIMFGFALVCL 55
>SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 230 VGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
+G LS + NF + A ++ C MFGF + L
Sbjct: 21 MGTGLSANVLHNFPFAARWLRICSYIMFGFALVCL 55
>SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 230 VGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
+G LS + NF + A ++ C MFGF + L
Sbjct: 21 MGTGLSANVLHNFPFAARWLRICSYIMFGFALVCL 55
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 59 ICYVLPSVLAGLAVQNMCLEKSCLVNLQYDE 89
+CY LP+V+ G A + + L S L++L D+
Sbjct: 549 LCYQLPAVIEGGASRGVTLVISPLLSLMQDQ 579
>SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 230 VGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
+G LS + NF + A ++ C MFGF + L
Sbjct: 21 MGTGLSANVLHNFPFAARWLRICSYIMFGFALVCL 55
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 204 ISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAV 247
+SD + + +V+ V+ S +GL ++G + ++ +K V
Sbjct: 423 LSDFVPKQHQGIAASLVSTVVNYSISIGLGIAGTVETHLNHKGV 466
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 201 YSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFI 260
Y+ ++D S S R G++T ++ + G LS + G + + +Y+ G I
Sbjct: 44 YNPVTDTYSYSSA--RQGLITGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGII 101
>SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 983
Score = 25.8 bits (54), Expect = 8.5
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 16 EPCKCNKQYSKEINTENKLSR------DLKESLKKIWRLRTKITVEP----FVICYVLPS 65
EP K YS ++ +N +S L+ S+ IWR TK+++ P F+ C L
Sbjct: 34 EPGFFGKLYSIFLDKQNDMSLRWIAIIQLRNSIDIIWRKNTKMSLLPEERDFIRCNALLG 93
Query: 66 VLAG---LAVQNMCLEKSCLVNLQYDEE--TCRHIMQGRTQ 101
+ L++QN L S + L Y E + H + G+ Q
Sbjct: 94 SIKSENLLSIQN-ALVVSRIARLDYPTEWPSLFHDLLGKLQ 133
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.325 0.137 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,248,997
Number of Sequences: 5004
Number of extensions: 45000
Number of successful extensions: 180
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 168
Number of HSP's gapped (non-prelim): 14
length of query: 328
length of database: 2,362,478
effective HSP length: 73
effective length of query: 255
effective length of database: 1,997,186
effective search space: 509282430
effective search space used: 509282430
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 54 (25.8 bits)
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