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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (328 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821...    36   0.059
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991...    33   0.42 
11_01_0783 - 6554140-6554400,6554742-6556491,6556531-6556844           32   0.73 
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365...    31   0.96 
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672...    31   1.3  
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875...    29   5.1  
03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426...    29   5.1  

>01_06_1363 -
           36681605-36681789,36681875-36681908,36682017-36682154,
           36682578-36682724,36682821-36682865,36683043-36683331,
           36683443-36683669,36684109-36684528
          Length = 494

 Score = 35.5 bits (78), Expect = 0.059
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)

Query: 211 SERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILLRIXXXX 270
           +ER+  +GI  A   L   +GL LS I+ S  G    FV      +FGF+++L+ I    
Sbjct: 221 TERSSAVGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPFV---IFGLFGFLWVLVWISAIS 277

Query: 271 XXTVDGTKLECVSLFSLS---DLVATVKVGFKAREG 303
               +  ++    L  ++    LV T   G + R+G
Sbjct: 278 GTPGENAQISAHELDYITRGQKLVKTQSGGERLRKG 313


>01_01_1227 +
           9912646-9913056,9913306-9913413,9913517-9913672,
           9914110-9914325,9914436-9914645,9914722-9914859,
           9915076-9915177,9915508-9915603
          Length = 478

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 194 VAMTMAVYSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACF 253
           VAM  A+ + +S     SER+  + +V + + L    GLA S ++  NFG+ +VF +   
Sbjct: 227 VAMP-AMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGS 285

Query: 254 IYMFGF 259
           + +F F
Sbjct: 286 LGVFWF 291


>11_01_0783 - 6554140-6554400,6554742-6556491,6556531-6556844
          Length = 774

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 11/103 (10%)

Query: 37  DLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAVQNMCLEKSCLVNLQYD--EETCRH 94
           +LKE  +K+  +R ++T+   VI  +  S L G+ V+N   E   L     D  ++   H
Sbjct: 34  NLKEMPEKVEEIRKQLTIMNSVILQIGTSYLTGIVVKNWIAEVRKLAYHVEDVMDKYSYH 93

Query: 95  IMQGRTQNYTEQ---------EKKVQRMVTTMSSWSSPLQTAP 128
            +Q   + + +          EK++Q+++     W  P Q  P
Sbjct: 94  AIQLEEEGFLKNDIAEEVVKLEKQIQQVIKLKEQWLHPSQLNP 136


>03_05_0432 -
           24231984-24233048,24233391-24235160,24235261-24236582,
           24236668-24237013
          Length = 1500

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 12/107 (11%)

Query: 21  NKQYSKEINTENKLSRDLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAVQNMCLEKS 80
           N++  KE+ + ++ ++DLK  +  +     K  +E  V+C     +   LA QN   EK 
Sbjct: 120 NERLQKELESLSEENKDLKSRISSLLEQTNKAELE--VVC-----LKEALAQQN--TEKE 170

Query: 81  CLVNLQYDEETCRHIMQGRTQNYTEQEKKVQRMVTTMSSWSSPLQTA 127
            +V LQ  + T R  +Q         ++K  R+   M S   P  TA
Sbjct: 171 AIV-LQCQQSTAR--LQNLKSEILHTQEKFNRLKEEMQSGFQPFTTA 214


>09_06_0351 +
           22466160-22466217,22466514-22467052,22467186-22467293,
           22467391-22467546,22467916-22468131,22468639-22468776,
           22468880-22468981,22469089-22469146,22469346-22469408,
           22469543-22469640
          Length = 511

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 194 VAMTMAVYSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVF 248
           VAM  A+ + +S     SER+  + +V + + L    GLA S ++ S FG+ +VF
Sbjct: 289 VAMP-AMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVF 342


>04_04_1099 -
           30886361-30886591,30886739-30886941,30887030-30887555,
           30887751-30887988,30888592-30888695,30888784-30889059,
           30889216-30889218
          Length = 526

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 134 LFIGAWSDRTGNRKAFMIVPILGKLISAIGVML-SAVFFRQVGMNETXXXXXXXXXXXXX 192
           +FI ++++  G+  + MIV  +G+ +S   ++  S VF   +  + T             
Sbjct: 376 VFISSFAEIPGSFLSAMIVDRIGRKLSMASMLFTSCVFLFPLIFSRTDILTRVSLFGARL 435

Query: 193 RVAMTMA-VYSYISDITSESERTFRIGIVTAV 223
            ++ +   VY Y  +I   S RT  IG+ ++V
Sbjct: 436 CISASFTIVYIYAPEIYPTSVRTTGIGVASSV 467


>03_01_0577 +
           4261249-4262055,4262149-4262203,4262293-4262468,
           4262554-4262718,4262811-4263178,4263225-4263861,
           4263952-4265844,4266325-4266672
          Length = 1482

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 13  VSVEPCKCNKQYSKEINTENKLSRDLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAV 72
           VSV   +   Q  +E   E K S+D K  + +IWRL+ +    P +I   L  + AG   
Sbjct: 870 VSVSKSRYGFQTIRE-EEEKKDSQDAKVRVSEIWRLQRR--EGPLLILGFLMGIHAGAVF 926

Query: 73  QNMCLEKSCLVNLQYDEETCR 93
               L     V + +D +T R
Sbjct: 927 SVFPLLLGQAVEVYFDADTAR 947


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.325    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,704,943
Number of Sequences: 37544
Number of extensions: 267651
Number of successful extensions: 791
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 8
length of query: 328
length of database: 14,793,348
effective HSP length: 82
effective length of query: 246
effective length of database: 11,714,740
effective search space: 2881826040
effective search space used: 2881826040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)

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