Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
(328 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 36 0.059
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 33 0.42
11_01_0783 - 6554140-6554400,6554742-6556491,6556531-6556844 32 0.73
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 31 0.96
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 31 1.3
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 29 5.1
03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426... 29 5.1
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 35.5 bits (78), Expect = 0.059
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 211 SERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILLRIXXXX 270
+ER+ +GI A L +GL LS I+ S G FV +FGF+++L+ I
Sbjct: 221 TERSSAVGIAMAGFQLGNTIGLLLSPIIMSRAGIFGPFV---IFGLFGFLWVLVWISAIS 277
Query: 271 XXTVDGTKLECVSLFSLS---DLVATVKVGFKAREG 303
+ ++ L ++ LV T G + R+G
Sbjct: 278 GTPGENAQISAHELDYITRGQKLVKTQSGGERLRKG 313
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 194 VAMTMAVYSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACF 253
VAM A+ + +S SER+ + +V + + L GLA S ++ NFG+ +VF +
Sbjct: 227 VAMP-AMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGWPSVFYSFGS 285
Query: 254 IYMFGF 259
+ +F F
Sbjct: 286 LGVFWF 291
>11_01_0783 - 6554140-6554400,6554742-6556491,6556531-6556844
Length = 774
Score = 31.9 bits (69), Expect = 0.73
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 37 DLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAVQNMCLEKSCLVNLQYD--EETCRH 94
+LKE +K+ +R ++T+ VI + S L G+ V+N E L D ++ H
Sbjct: 34 NLKEMPEKVEEIRKQLTIMNSVILQIGTSYLTGIVVKNWIAEVRKLAYHVEDVMDKYSYH 93
Query: 95 IMQGRTQNYTEQ---------EKKVQRMVTTMSSWSSPLQTAP 128
+Q + + + EK++Q+++ W P Q P
Sbjct: 94 AIQLEEEGFLKNDIAEEVVKLEKQIQQVIKLKEQWLHPSQLNP 136
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 31.5 bits (68), Expect = 0.96
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 21 NKQYSKEINTENKLSRDLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAVQNMCLEKS 80
N++ KE+ + ++ ++DLK + + K +E V+C + LA QN EK
Sbjct: 120 NERLQKELESLSEENKDLKSRISSLLEQTNKAELE--VVC-----LKEALAQQN--TEKE 170
Query: 81 CLVNLQYDEETCRHIMQGRTQNYTEQEKKVQRMVTTMSSWSSPLQTA 127
+V LQ + T R +Q ++K R+ M S P TA
Sbjct: 171 AIV-LQCQQSTAR--LQNLKSEILHTQEKFNRLKEEMQSGFQPFTTA 214
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 194 VAMTMAVYSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVF 248
VAM A+ + +S SER+ + +V + + L GLA S ++ S FG+ +VF
Sbjct: 289 VAMP-AMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLISRFGWPSVF 342
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 134 LFIGAWSDRTGNRKAFMIVPILGKLISAIGVML-SAVFFRQVGMNETXXXXXXXXXXXXX 192
+FI ++++ G+ + MIV +G+ +S ++ S VF + + T
Sbjct: 376 VFISSFAEIPGSFLSAMIVDRIGRKLSMASMLFTSCVFLFPLIFSRTDILTRVSLFGARL 435
Query: 193 RVAMTMA-VYSYISDITSESERTFRIGIVTAV 223
++ + VY Y +I S RT IG+ ++V
Sbjct: 436 CISASFTIVYIYAPEIYPTSVRTTGIGVASSV 467
>03_01_0577 +
4261249-4262055,4262149-4262203,4262293-4262468,
4262554-4262718,4262811-4263178,4263225-4263861,
4263952-4265844,4266325-4266672
Length = 1482
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 13 VSVEPCKCNKQYSKEINTENKLSRDLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAV 72
VSV + Q +E E K S+D K + +IWRL+ + P +I L + AG
Sbjct: 870 VSVSKSRYGFQTIRE-EEEKKDSQDAKVRVSEIWRLQRR--EGPLLILGFLMGIHAGAVF 926
Query: 73 QNMCLEKSCLVNLQYDEETCR 93
L V + +D +T R
Sbjct: 927 SVFPLLLGQAVEVYFDADTAR 947
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.325 0.137 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,704,943
Number of Sequences: 37544
Number of extensions: 267651
Number of successful extensions: 791
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 8
length of query: 328
length of database: 14,793,348
effective HSP length: 82
effective length of query: 246
effective length of database: 11,714,740
effective search space: 2881826040
effective search space used: 2881826040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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