Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
(328 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical ... 56 5e-08
AF077539-1|AAK84580.2| 550|Caenorhabditis elegans Hypothetical ... 38 0.007
Z68317-5|CAA92689.2| 165|Caenorhabditis elegans Hypothetical pr... 33 0.37
AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical ... 32 0.49
AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm rece... 31 1.5
AC006769-6|AAF60582.1| 274|Caenorhabditis elegans Hypothetical ... 31 1.5
Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical p... 30 2.6
Z79694-7|CAB01964.1| 396|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical ... 29 4.5
>AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical
protein Y4C6B.5 protein.
Length = 469
Score = 55.6 bits (128), Expect = 5e-08
Identities = 55/253 (21%), Positives = 99/253 (39%), Gaps = 9/253 (3%)
Query: 61 YVLPSVLAGLAVQNMCLEKSCLVNLQYDEETCRHIMQGRTQNYTEQEKKVQRMVTTMSSW 120
Y+L S L QN+ EK CL+ Q +E CR++ Y + +K +Q
Sbjct: 17 YMLGSYLNYPVFQNLIYEKECLIKYQQNETFCRNVSA-----YYD-DKDIQAAANHFYFI 70
Query: 121 SSPLQTAPPGILALFIGAWSDRTGNRKAFMIVPILGKLISAIGVMLSAVFFRQVGMNETX 180
SS P + L +GA +D + K +I+P +G ++ I + + F
Sbjct: 71 SSLTLLCPSLVTTLLLGAATDYW-SIKIPLIIPYIGCILGTINYVFQSYFIHTSVYFLLI 129
Query: 181 XXXXXXXXXXXXRVAMTMAVYSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTS 240
+ T Y + + R++RI V + L VG ALSG +
Sbjct: 130 SDALFGLCGGFIAIISTTLTYGVKTSMLRY--RSYRIAGVEGAIGLGGTVGFALSGTIRE 187
Query: 241 NFGYKAVFVTACFIYMFGFIYILLRIXXXXXXTVDGTKLECVSLFSLSDLVATVKVGFKA 300
GY F+ + + +Y+L V + + + LVA ++ ++
Sbjct: 188 ACGYAVTFLIILGLQLLALLYLLGLAKETKFEPVRPDEHTSLISTTGKQLVAVIREFYRV 247
Query: 301 REGTHRVQVILIL 313
+ + +++LIL
Sbjct: 248 ITKSRQFRLLLIL 260
>AF077539-1|AAK84580.2| 550|Caenorhabditis elegans Hypothetical
protein T25D3.4 protein.
Length = 550
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 200 VYSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGF 259
+ +Y++DIT +SER+ G+V+A S AL ++ +G V + A + +
Sbjct: 181 ILAYVADITDKSERSSAYGLVSATFAASLVTSPALGAYISEVYGDSLVVLLATIVSVADV 240
Query: 260 IYILL 264
I+I+L
Sbjct: 241 IFIVL 245
>Z68317-5|CAA92689.2| 165|Caenorhabditis elegans Hypothetical
protein T01H3.5 protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 86 QYDEETCRHIMQGRTQNYTEQEKKVQRMVTTMSSWSSPLQTAPPGILALFI 136
++D T R I +N + EKK++ + T S WS P QT + +++
Sbjct: 80 EFDAMTERKIENFYFRNVEQAEKKMKHLTTLKSKWSEPWQTGEEIVAKVYL 130
>AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical
protein Y43F8A.5 protein.
Length = 475
Score = 32.3 bits (70), Expect = 0.49
Identities = 42/209 (20%), Positives = 81/209 (38%), Gaps = 12/209 (5%)
Query: 58 VICYVLPSVLAGLAVQNMCLEKSCLVNLQYDEETCRHIMQGRTQNYTEQEKKVQRMVTTM 117
+ Y L S + Q++ K+C+ T I + Y ++ V M + +
Sbjct: 7 IFLYALTSSVFFPVFQSLIFYKACIT---LSNSTEPEIACKSKETYA-RDNSVHSMSSVI 62
Query: 118 SSWSSPLQTAPPGILALFIGAWSDRTGNRKAFMIVPILGKLISAIGVMLSAVFFRQVGMN 177
SS + ++G SD + AF+ +P +G IS +++ ++ R
Sbjct: 63 LMASSTGLCVSAFFTSRWVGHLSDVKSRKLAFL-IPFIGLFISDFTILIQVLYPRL--SP 119
Query: 178 ETXXXXXXXXXXXXXRVAMTMAVYSYISDITSES-ERTFRIGIVTAVLTLSKPVGLALSG 236
+++T +S +S + S+ ER I + ++L VG +S
Sbjct: 120 YYFIVSEVIYGFFGGYMSITSGAFSIVSTMHSDQRERAKGIARLEGTISLGSTVGFLISS 179
Query: 237 IMTSNFGY---KAVFVTACFIYMFGFIYI 262
NFGY + F+ A FI +++
Sbjct: 180 -QLKNFGYLGAASFFLVAHFIAFMSAVFM 207
>AF125954-5|AAD14708.2| 338|Caenorhabditis elegans Seven tm
receptor protein 120 protein.
Length = 338
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 150 MIVPILGKLISAIGVMLSAVF-FRQVGMNETXXXXXXXXXXXX-XRVAMTMAVYSYISDI 207
M +P+ ++I IG +LS VF F + + T ++ +Y+ + +
Sbjct: 1 MCIPLEFQIIQVIGFILSEVFHFTLLFLIHTRATRHFGSYKLLMASFSIFSILYALVEVL 60
Query: 208 TSESERTFRIGIV----TAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFI 260
T G++ T L +SK G ++ S FG +F++A F Y + +
Sbjct: 61 TQPIMHISGTGLMLYVGTTFLPISKEFGHFIAAFYCSTFGICVLFLSAHFFYRYSAV 117
>AC006769-6|AAF60582.1| 274|Caenorhabditis elegans Hypothetical
protein Y45G12C.6 protein.
Length = 274
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 150 MIVPILGKLISAIGVMLSAVF-FRQVGMNETXXXXXXXXXXXX-XRVAMTMAVYSYISDI 207
M +P+ ++I IG +LS VF F + + T ++ +Y+ + +
Sbjct: 1 MCIPLEFQIIQVIGFILSEVFHFTLLFLIHTRATRHFGSYKLLMASFSIFSILYALVEVL 60
Query: 208 TSESERTFRIGIV----TAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFI 260
T G++ T L +SK G ++ S FG +F++A F Y + +
Sbjct: 61 TQPIMHISGTGLMLYVGTTFLPISKEFGHFIAAFYCSTFGICVLFLSAHFFYRYSAV 117
>Z92804-1|CAB07252.1| 338|Caenorhabditis elegans Hypothetical
protein K05D4.2 protein.
Length = 338
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 211 SERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMF 257
+ER+F I V V LSKPV +M ++FG +T F Y +
Sbjct: 71 TERSFVIFSVLRVTKLSKPVAEVGLSLMCASFGILLALLTIHFYYRY 117
>Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical
protein F40F9.5 protein.
Length = 585
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 100 TQNYTEQEKKVQRMVTTMSSWSSPLQTAPPGILALFIGAWSDRTGNRKAFMIVPILGKLI 159
+ N T Q+ V++ + + + T P I++ IG WSDR G RK+ ++ + G I
Sbjct: 112 SSNGTLQDD-VEKDIANTKIYLQIMGTIPTLIVSPLIGNWSDRNG-RKSPLLFSLFGLFI 169
Query: 160 SAIGVMLSAVFFRQVGM 176
+ ++ + + + V +
Sbjct: 170 NNFILLCATLTYETVNV 186
>Z79694-7|CAB01964.1| 396|Caenorhabditis elegans Hypothetical
protein C15A11.7 protein.
Length = 396
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 196 MTMAVYSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIY 255
+TM V + IS +T+E ++T VL L+ + + +M + G A FV C I+
Sbjct: 89 VTMVVGALISGMTAEGAGAVAFPVMTLVLHLAPSIARDFA-LMIQSIGMMAAFV--CVIF 145
Query: 256 M 256
M
Sbjct: 146 M 146
>AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical
protein ZK1240.3 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 10 EKVVSVEPCKCNKQYSKEINTENKLSRDLKESLKKIWRLRTKITV 54
E ++ +K Y + ENKL + +E KK+ R++T+I +
Sbjct: 202 EAIIEKLELSSSKTYELNLEKENKLLQSQEELAKKMERMKTRINL 246
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.137 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,785,367
Number of Sequences: 27539
Number of extensions: 248320
Number of successful extensions: 938
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 932
Number of HSP's gapped (non-prelim): 10
length of query: 328
length of database: 12,573,161
effective HSP length: 82
effective length of query: 246
effective length of database: 10,314,963
effective search space: 2537480898
effective search space used: 2537480898
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -