GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (328 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    25   1.2  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    25   1.2  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    24   1.6  

>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 20  CNKQYSKEINTENKLSRDLKESLKKIW-RLRTK 51
           CNK   K+ +T NK+   LK    K W RL  K
Sbjct: 72  CNKCNEKQKHTANKVVNYLKTKRPKDWERLSAK 104


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 20  CNKQYSKEINTENKLSRDLKESLKKIW-RLRTK 51
           CNK   K+ +T NK+   LK    K W RL  K
Sbjct: 72  CNKCNEKQKHTANKVVNYLKTKRPKDWERLSAK 104


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 19  KCNKQYSKEINTENKLSRDLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAVQNM 75
           +CN QY+   NTE     ++   L +   L +K T  P  + YV   +  G+ + ++
Sbjct: 107 ECNIQYALNPNTEEYYIIEVNARLSRSSALASKATGYP--LAYVAAKLALGVRLPDI 161


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,734
Number of Sequences: 429
Number of extensions: 2900
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 328
length of database: 140,377
effective HSP length: 58
effective length of query: 270
effective length of database: 115,495
effective search space: 31183650
effective search space used: 31183650
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)