BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator superfamily, IPR011701|Major facilitator superfamily MFS_1 (328 letters) Database: bee 429 sequences; 140,377 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 25 1.2 AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 25 1.2 DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 24 1.6 >DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6 protein. Length = 125 Score = 24.6 bits (51), Expect = 1.2 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 20 CNKQYSKEINTENKLSRDLKESLKKIW-RLRTK 51 CNK K+ +T NK+ LK K W RL K Sbjct: 72 CNKCNEKQKHTANKVVNYLKTKRPKDWERLSAK 104 >AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein protein. Length = 125 Score = 24.6 bits (51), Expect = 1.2 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 20 CNKQYSKEINTENKLSRDLKESLKKIW-RLRTK 51 CNK K+ +T NK+ LK K W RL K Sbjct: 72 CNKCNEKQKHTANKVVNYLKTKRPKDWERLSAK 104 >DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain protein protein. Length = 448 Score = 24.2 bits (50), Expect = 1.6 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 19 KCNKQYSKEINTENKLSRDLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAVQNM 75 +CN QY+ NTE ++ L + L +K T P + YV + G+ + ++ Sbjct: 107 ECNIQYALNPNTEEYYIIEVNARLSRSSALASKATGYP--LAYVAAKLALGVRLPDI 161 Database: bee Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 140,377 Number of sequences in database: 429 Lambda K H 0.325 0.137 0.403 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 80,734 Number of Sequences: 429 Number of extensions: 2900 Number of successful extensions: 8 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 5 Number of HSP's gapped (non-prelim): 3 length of query: 328 length of database: 140,377 effective HSP length: 58 effective length of query: 270 effective length of database: 115,495 effective search space: 31183650 effective search space used: 31183650 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 44 (21.8 bits)
- SilkBase 1999-2023 -