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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator
superfamily, IPR011701|Major facilitator superfamily MFS_1
         (328 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g67220.1 68414.m07651 zinc finger protein-related similar to ...    30   2.5  
At3g46980.2 68416.m05102 transporter-related low similarity to b...    29   3.2  
At3g46980.1 68416.m05101 transporter-related low similarity to b...    29   3.2  
At4g00370.1 68417.m00051 sugar transporter family protein contai...    29   4.3  
At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 ...    28   7.5  
At4g35470.1 68417.m05041 leucine-rich repeat family protein simi...    28   9.9  
At1g63720.1 68414.m07211 expressed protein similar to putative p...    28   9.9  

>At1g67220.1 68414.m07651 zinc finger protein-related similar to
           SP|Q09472 E1A-associated protein p300 {Homo sapiens},
           SP|Q92793 CREB-binding protein {Homo sapiens}; contains
           Pfam profiles PF00569: Zinc finger ZZ type, PF00628:
           PHD-finger, PF02135: TAZ zinc finger
          Length = 1357

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 11/80 (13%)

Query: 15  VEPCKCNKQYSKEINTEN-KLSRDLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAVQ 73
           VEP KCN++   E+N +   L +  K ++  + R  T+  ++  ++    PS  +  AV+
Sbjct: 577 VEPMKCNEESKCEVNADTMSLQKRSKRAVSLVERF-TEEEIKLHIMSLKKPSTQS--AVE 633

Query: 74  NMCLEKSCLVNLQYDEETCR 93
            MC       +L+ +EE+C+
Sbjct: 634 GMC-------DLKEEEESCQ 646


>At3g46980.2 68416.m05102 transporter-related low similarity to
           brain specific Na+-dependent inorganic phosphate
           cotransporter from [Rattus norvegicus] GI:507415, [Homo
           sapiens] GI:7328925, vesicular glutamate transporter 3
           from [Rattus norvegicus] GI:21685382; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 469

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 211 SERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
           +ER+  +GI  A   L   VGL LS I+ S  G    FV      + GF+++L+
Sbjct: 235 TERSRAVGIAMAGFQLGNVVGLMLSPILMSQGGIYGPFV---IFGLSGFLWLLV 285


>At3g46980.1 68416.m05101 transporter-related low similarity to
           brain specific Na+-dependent inorganic phosphate
           cotransporter from [Rattus norvegicus] GI:507415, [Homo
           sapiens] GI:7328925, vesicular glutamate transporter 3
           from [Rattus norvegicus] GI:21685382; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 533

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 211 SERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264
           +ER+  +GI  A   L   VGL LS I+ S  G    FV      + GF+++L+
Sbjct: 235 TERSRAVGIAMAGFQLGNVVGLMLSPILMSQGGIYGPFV---IFGLSGFLWLLV 285


>At4g00370.1 68417.m00051 sugar transporter family protein contains
           Pfam profile PF00083: major facilitator superfamily
           protein
          Length = 541

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 194 VAMTMAVYSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVF 248
           VAM  A+ + +S     SER+  + +V + + L    GLA S ++ + FG+ +VF
Sbjct: 239 VAMP-AMNNMLSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPMLITKFGWPSVF 292


>At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5
          family protein contains Pfam domain PF04153: NOT2 /
          NOT3 / NOT5 family
          Length = 843

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 21 NKQYSKE-INTENKLSRDLKESLKKIWRLRTKI 52
          NK Y  + +N + K   DLK+ +KK+ R R +I
Sbjct: 30 NKVYDTDNVNQKEKFEADLKKEIKKLQRYRDQI 62


>At4g35470.1 68417.m05041 leucine-rich repeat family protein similar
           to Leucine-rich repeat protein SHOC-2 (Ras-binding
           protein Sur-8) (SP:Q9UQ13 ){Homo sapiens},PIR:T12704;
           contains Pfam PF00560: Leucine Rich Repeat domains
          Length = 549

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 5/53 (9%)

Query: 22  KQYSKEINTENKLSRDLK---ESLKKIWRLRTKITVEPFVICYVLPSVLAGLA 71
           K+ ++EIN +NKL+  L+   +SL K+  L +    E  ++  VLP+ + GL+
Sbjct: 219 KKATQEINLQNKLTEQLEWLPDSLGKLSSLTSLDLSENHIV--VLPNTIGGLS 269


>At1g63720.1 68414.m07211 expressed protein similar to putative
           protein GB:CAA18164 [Arabidopsis thaliana]
          Length = 358

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 211 SERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFI 254
           S +  RIG   +VL + +PV ++ S   TSN GY++V  T  FI
Sbjct: 53  SRQRKRIG--NSVL-VPEPVSMSSSNSTTSNSGYRSVITTLPFI 93


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.325    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,515,180
Number of Sequences: 28952
Number of extensions: 235145
Number of successful extensions: 802
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 798
Number of HSP's gapped (non-prelim): 13
length of query: 328
length of database: 12,070,560
effective HSP length: 81
effective length of query: 247
effective length of database: 9,725,448
effective search space: 2402185656
effective search space used: 2402185656
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)

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