BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001911-TA|BGIBMGA001911-PA|IPR007114|Major facilitator superfamily, IPR011701|Major facilitator superfamily MFS_1 (328 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g67220.1 68414.m07651 zinc finger protein-related similar to ... 30 2.5 At3g46980.2 68416.m05102 transporter-related low similarity to b... 29 3.2 At3g46980.1 68416.m05101 transporter-related low similarity to b... 29 3.2 At4g00370.1 68417.m00051 sugar transporter family protein contai... 29 4.3 At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 ... 28 7.5 At4g35470.1 68417.m05041 leucine-rich repeat family protein simi... 28 9.9 At1g63720.1 68414.m07211 expressed protein similar to putative p... 28 9.9 >At1g67220.1 68414.m07651 zinc finger protein-related similar to SP|Q09472 E1A-associated protein p300 {Homo sapiens}, SP|Q92793 CREB-binding protein {Homo sapiens}; contains Pfam profiles PF00569: Zinc finger ZZ type, PF00628: PHD-finger, PF02135: TAZ zinc finger Length = 1357 Score = 29.9 bits (64), Expect = 2.5 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 11/80 (13%) Query: 15 VEPCKCNKQYSKEINTEN-KLSRDLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAVQ 73 VEP KCN++ E+N + L + K ++ + R T+ ++ ++ PS + AV+ Sbjct: 577 VEPMKCNEESKCEVNADTMSLQKRSKRAVSLVERF-TEEEIKLHIMSLKKPSTQS--AVE 633 Query: 74 NMCLEKSCLVNLQYDEETCR 93 MC +L+ +EE+C+ Sbjct: 634 GMC-------DLKEEEESCQ 646 >At3g46980.2 68416.m05102 transporter-related low similarity to brain specific Na+-dependent inorganic phosphate cotransporter from [Rattus norvegicus] GI:507415, [Homo sapiens] GI:7328925, vesicular glutamate transporter 3 from [Rattus norvegicus] GI:21685382; contains Pfam profile PF00083: major facilitator superfamily protein Length = 469 Score = 29.5 bits (63), Expect = 3.2 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 211 SERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264 +ER+ +GI A L VGL LS I+ S G FV + GF+++L+ Sbjct: 235 TERSRAVGIAMAGFQLGNVVGLMLSPILMSQGGIYGPFV---IFGLSGFLWLLV 285 >At3g46980.1 68416.m05101 transporter-related low similarity to brain specific Na+-dependent inorganic phosphate cotransporter from [Rattus norvegicus] GI:507415, [Homo sapiens] GI:7328925, vesicular glutamate transporter 3 from [Rattus norvegicus] GI:21685382; contains Pfam profile PF00083: major facilitator superfamily protein Length = 533 Score = 29.5 bits (63), Expect = 3.2 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 211 SERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFIYMFGFIYILL 264 +ER+ +GI A L VGL LS I+ S G FV + GF+++L+ Sbjct: 235 TERSRAVGIAMAGFQLGNVVGLMLSPILMSQGGIYGPFV---IFGLSGFLWLLV 285 >At4g00370.1 68417.m00051 sugar transporter family protein contains Pfam profile PF00083: major facilitator superfamily protein Length = 541 Score = 29.1 bits (62), Expect = 4.3 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 194 VAMTMAVYSYISDITSESERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVF 248 VAM A+ + +S SER+ + +V + + L GLA S ++ + FG+ +VF Sbjct: 239 VAMP-AMNNMLSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPMLITKFGWPSVF 292 >At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 family protein contains Pfam domain PF04153: NOT2 / NOT3 / NOT5 family Length = 843 Score = 28.3 bits (60), Expect = 7.5 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Query: 21 NKQYSKE-INTENKLSRDLKESLKKIWRLRTKI 52 NK Y + +N + K DLK+ +KK+ R R +I Sbjct: 30 NKVYDTDNVNQKEKFEADLKKEIKKLQRYRDQI 62 >At4g35470.1 68417.m05041 leucine-rich repeat family protein similar to Leucine-rich repeat protein SHOC-2 (Ras-binding protein Sur-8) (SP:Q9UQ13 ){Homo sapiens},PIR:T12704; contains Pfam PF00560: Leucine Rich Repeat domains Length = 549 Score = 27.9 bits (59), Expect = 9.9 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 5/53 (9%) Query: 22 KQYSKEINTENKLSRDLK---ESLKKIWRLRTKITVEPFVICYVLPSVLAGLA 71 K+ ++EIN +NKL+ L+ +SL K+ L + E ++ VLP+ + GL+ Sbjct: 219 KKATQEINLQNKLTEQLEWLPDSLGKLSSLTSLDLSENHIV--VLPNTIGGLS 269 >At1g63720.1 68414.m07211 expressed protein similar to putative protein GB:CAA18164 [Arabidopsis thaliana] Length = 358 Score = 27.9 bits (59), Expect = 9.9 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%) Query: 211 SERTFRIGIVTAVLTLSKPVGLALSGIMTSNFGYKAVFVTACFI 254 S + RIG +VL + +PV ++ S TSN GY++V T FI Sbjct: 53 SRQRKRIG--NSVL-VPEPVSMSSSNSTTSNSGYRSVITTLPFI 93 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.325 0.137 0.403 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,515,180 Number of Sequences: 28952 Number of extensions: 235145 Number of successful extensions: 802 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 798 Number of HSP's gapped (non-prelim): 13 length of query: 328 length of database: 12,070,560 effective HSP length: 81 effective length of query: 247 effective length of database: 9,725,448 effective search space: 2402185656 effective search space used: 2402185656 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 59 (27.9 bits)
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