GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001910-TA|BGIBMGA001910-PA|IPR000832|GPCR, family 2,
secretin-like, IPR002001|Diuretic hormone receptor
         (213 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g37440.2 68415.m04593 endonuclease/exonuclease/phosphatase fa...    29   3.1  
At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel...    27   7.2  
At5g34838.1 68418.m04072 hypothetical protein contains Pfam doma...    27   7.2  
At1g70090.1 68414.m08064 glycosyl transferase family 8 protein c...    27   7.2  
At1g55365.1 68414.m06328 hypothetical protein                          27   9.5  

>At2g37440.2 68415.m04593 endonuclease/exonuclease/phosphatase
           family protein similar to inositol polyphosphate
           5-phosphatase I (GI:10444261) and II (GI:10444263)
           [Arabidopsis thaliana]; contains Pfam profile PF03372:
           Endonuclease/Exonuclease/phosphatase family
          Length = 398

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/70 (30%), Positives = 28/70 (40%)

Query: 37  ITKLRSANTLETEQYRKATKALLVLIPLLGITNLLVLCGPSDDSWFAYSFDYARALMLST 96
           I  L + N L  E    A K L ++   L  TN L   G SDD+    +    R   L+ 
Sbjct: 58  IVPLNAGNVLGAEDNGPAAKWLSLIREALNNTNNLSFSGLSDDTPIPCNSTPPRGYSLAA 117

Query: 97  QGFTVALFYC 106
               V +F C
Sbjct: 118 SKQMVGIFLC 127


>At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel /
           cyclic nucleotide-gated channel (CNGC1) almost identical
           to cyclic nucleotide-regulated ion channel 1 pir:T51354,
           GI:11357236 from [Arabidopsis thaliana]
          Length = 716

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 89  ARALMLSTQGFTVALFYCFMNTEVRHAIRYHVERWKT 125
           A AL      F  + F    + ++RH  RY+ ++WKT
Sbjct: 587 AFALKADDLKFVASQFRRLHSKQLRHTFRYYSQQWKT 623


>At5g34838.1 68418.m04072 hypothetical protein contains Pfam domain,
           PF04827: Protein of unknown function (DUF635)
          Length = 311

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 152 IRSYSKKLTRFKIRRIGTDSV-LNTVNKTVGQVIQPPVEARVCGFGDDHHHTPRAEDLTR 210
           +  +S ++  FK RR  T  +  + + K+   +     E  +  FGD++   P  +DL R
Sbjct: 27  VEKFSNEVPYFKQRRDATGRLGFSALQKSTAAIRMLAYEGTINLFGDEYLRRPTRDDLIR 86


>At1g70090.1 68414.m08064 glycosyl transferase family 8 protein
           contains Pfam profile: PF01501 glycosyl transferase
           family 8
          Length = 390

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 144 SPRSRTESIRSYSKKLTRFKIRRIGTDSVLNTVNKTVGQVIQPPV 188
           SPR  ++ +RS    L  FK+     D+V+N ++ ++ Q ++ P+
Sbjct: 126 SPRVLSQLVRSTFPSLN-FKVYIFREDTVINLISSSIRQALENPL 169


>At1g55365.1 68414.m06328 hypothetical protein
          Length = 126

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 9/59 (15%)

Query: 34 WVLITKLRSANTLETEQYRKATKALLVLIPLLGITNLLV-----LCGPSDDSWFAYSFD 87
          W LI ++ S+  ++TEQ       + V  P+  ++  ++     +C PS DS+++Y+++
Sbjct: 19 WQLIWRVPSSQRIDTEQLFD----IAVCFPIHQLSRFVLCLWTFMCLPSSDSFYSYTYE 73


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.325    0.135    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,326,156
Number of Sequences: 28952
Number of extensions: 137529
Number of successful extensions: 344
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 341
Number of HSP's gapped (non-prelim): 6
length of query: 213
length of database: 12,070,560
effective HSP length: 78
effective length of query: 135
effective length of database: 9,812,304
effective search space: 1324661040
effective search space used: 1324661040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 57 (27.1 bits)