Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001909-TA|BGIBMGA001909-PA|undefined
(115 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 32 0.020
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 29 0.14
SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces... 26 1.7
SPAC15A10.09c |||SUR7 family protein|Schizosaccharomyces pombe|c... 25 2.3
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 25 2.3
SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 3.0
SPCC613.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 25 4.0
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 25 4.0
SPBC4F6.15c |swi10|rad23|DNA repair endonuclease|Schizosaccharom... 24 5.3
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 24 5.3
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 24 5.3
SPBC106.03 |||DUF1776 family protein|Schizosaccharomyces pombe|c... 24 7.0
SPCC736.03c |||phenylalanyl-tRNA synthetase|Schizosaccharomyces ... 24 7.0
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 24 7.0
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 24 7.0
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 23 9.2
SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease XPF... 23 9.2
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 23 9.2
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 32.3 bits (70), Expect = 0.020
Identities = 18/91 (19%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 17 IAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVAKLSALIGVTESLA 76
++ ++ A+A + ++A + S + ++SIA V +E ++ A V E++A
Sbjct: 533 LSAAVLLAVAKSDVALFTAVIIQAISNMVVPCVQSIALNGVQSEYNGRVLAAFAVFEAVA 592
Query: 77 PSIYMPASSYIYMSTIE-TFPGAFYLFDAAL 106
I P +++Y +++ ++P + A +
Sbjct: 593 LIIRGPIYAFVYTESMKVSYPNMIFFLSAVI 623
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 29.5 bits (63), Expect = 0.14
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 21 LMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIAT-----KSVPTEEVAKLSALIGVTESL 75
L FA++ + +YS + +F G + + +IA + +A+LS + G E+
Sbjct: 103 LFFAISFQAECYYSLTAYATSAFAGHSLLSTIAVANNIISAAIKPPLARLSDVFGRLEAF 162
Query: 76 APSIYMPASSYIYM---STIETFPGAFYLFDAALTVVALCL 113
S+ + I M + ++T+ G L++A T V L +
Sbjct: 163 LFSLLLYLVGLILMAASTNVQTYAGGSVLYNAGYTGVELIM 203
>SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 1.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 14 VSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLT 47
+S+I G L+++LA QW Y + + S G T
Sbjct: 163 ISQIIGHLLYSLAYRAQWLYLILIGRMCSGVGFT 196
>SPAC15A10.09c |||SUR7 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 25.4 bits (53), Expect = 2.3
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 1 MNVQDSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTE 60
M + I AL VS + CL F P F + F FT + A+ ++AT +
Sbjct: 184 MYILGFIFFALTIVSIVISCLPF-FGPL---FLNVFSFFATIFTFIAAVIAVATYRIAIS 239
Query: 61 EVAKLSALIGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALT 107
E+ K ++ + L IY +Y ++S F LT
Sbjct: 240 ELEKNIEILNIPIVLGKKIY----AYSFLSAAAGLAACILYFIGNLT 282
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 25.4 bits (53), Expect = 2.3
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 41 FSFTGLTAIRSIATKSVPTEEVAKLSALIGVTESLAPSIY-MPASSYIYMSTIE 93
F ++G AI+++ SV T + A I + SLA IY +P ++ IE
Sbjct: 105 FDYSGAQAIKALRESSVHTILINPNIATIQSSHSLADEIYFLPVTAEYLTHLIE 158
>SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 3.0
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 32 FYSAPLFNIFSFTGLTAIRSIATKSVPTEEVAKLSALIGVTESLAPSIYMPASSYIYMST 91
F SA LFN+F F+G +R +P E K +G + S+ + A S++ T
Sbjct: 297 FVSASLFNVFLFSGTVFMR--VKVGIPLFERLK----VGTNKVKNNSVNI-AQSFLEPQT 349
Query: 92 IETFPGAFYLFDAALTV 108
TF YLF ++V
Sbjct: 350 RSTF--LRYLFSDEVSV 364
>SPCC613.02 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 24.6 bits (51), Expect = 4.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 14 VSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLT 47
+S+I G L+++LA QW Y + + + G T
Sbjct: 163 ISQIIGHLLYSLAYRAQWLYLILIGRMCNGVGFT 196
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 24.6 bits (51), Expect = 4.0
Identities = 17/84 (20%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 34 SAPLFNIFSFTG------LTAIRSIATKSVPTEEVAKLSALIGVTESLAPSIYMPASSYI 87
++ LF + FTG + A+R+++ K+ ++V + ++ +IY A+ ++
Sbjct: 537 TSELFALVIFTGEESKIRMNAVRNVSVKAPSMQKVTNRIVIFIFALVVSMAIYCTAAYFV 596
Query: 88 YMSTIETFPGAFYLFDAALTVVAL 111
+ +E +YL ++ L+ V +
Sbjct: 597 WQKKVER--KLWYLTNSKLSFVPI 618
>SPBC4F6.15c |swi10|rad23|DNA repair
endonuclease|Schizosaccharomyces pombe|chr 2|||Manual
Length = 252
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 59 TEEVAKLSALIGVTESLAPSIYMPASSYIYMSTIETF 95
+EE A+ E+++P++ M S Y+S +++F
Sbjct: 144 SEEAARYLETYKAYENMSPALIMEKPSTDYLSQVQSF 180
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 24.2 bits (50), Expect = 5.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 54 TKSVPTEEVAKLSALIGVTESLAPSIY 80
T++ +E A+ S+ +GVT+SLA +Y
Sbjct: 491 TRNKHSEISAQSSSSLGVTKSLASEVY 517
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 81 MPASSYIYMSTIETFPGAFYLFDAALTVV 109
M S+ + ++TFP FYL D + V+
Sbjct: 257 MTDSNQFHACCLDTFPPIFYLNDTSRAVI 285
>SPBC106.03 |||DUF1776 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 357
Score = 23.8 bits (49), Expect = 7.0
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 5 DSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTG 45
DS++G +R GC F + ++ + + IFS G
Sbjct: 304 DSLLGCWPSPTRHVGCRTFFMVTVSRFLPTCVIDGIFSLFG 344
>SPCC736.03c |||phenylalanyl-tRNA synthetase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 429
Score = 23.8 bits (49), Expect = 7.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 54 TKSVPTEEVAKLSALIGVTESLAPSIYMPASSYIYMSTIETFP 96
TK V L+ +I SLAPSI A Y T ++FP
Sbjct: 211 TKFVSQHLKDTLTTVIHDLVSLAPSISSGAEQVRYRWTYDSFP 253
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 23.8 bits (49), Expect = 7.0
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 39 NIFSFTGLTAIRSIATKSVPTEEVAKLSALIGVTESLAPSIYMPA 83
N+ GL S PTE V S + S P+I PA
Sbjct: 519 NVLPLDGLPRYEEATRPSSPTESVEIPSNTTTIAPSPVPTIIAPA 563
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 23.8 bits (49), Expect = 7.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 76 APSIYMPASSYIYMSTIETFPGAFYLFDAALTVVAL 111
AP++ + AS+ S++ P FYLF + LTV L
Sbjct: 589 APTV-LSASTTSGTSSVRAKPIVFYLFASLLTVSLL 623
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 23.4 bits (48), Expect = 9.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 50 RSIATKSVPTEEVAKLSALIGVTESLAPSIYMPAS 84
+ I +K TEE+ +L L VT A +PAS
Sbjct: 300 KKIFSKICKTEELLELPTLSAVTSDSAQPHSLPAS 334
>SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease
XPF|Schizosaccharomyces pombe|chr 3|||Manual
Length = 892
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 40 IFSFTGLTAIRSIATKSVPTEEVAKLSAL 68
IF+ T + + TK +PTE++ + L
Sbjct: 99 IFAITSRILVMDLLTKIIPTEKITGIVLL 127
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 23.4 bits (48), Expect = 9.2
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Query: 80 YMPASSYI---YMSTIETFPGAFYL 101
YMPA + + Y +T+ TFP +Y+
Sbjct: 444 YMPAKNTMVGCYAATLVTFPALYYV 468
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.326 0.136 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,538
Number of Sequences: 5004
Number of extensions: 15888
Number of successful extensions: 71
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 19
length of query: 115
length of database: 2,362,478
effective HSP length: 64
effective length of query: 51
effective length of database: 2,042,222
effective search space: 104153322
effective search space used: 104153322
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 48 (23.4 bits)
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