BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001909-TA|BGIBMGA001909-PA|undefined (115 letters) Database: human 224,733 sequences; 73,234,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC048285-1|AAH48285.1| 475|Homo sapiens solute carrier family 4... 40 0.002 AL139041-1|CAI95196.1| 475|Homo sapiens thymic stromal co-trans... 40 0.002 AF242557-1|AAK28343.1| 475|Homo sapiens thymic stromal co-trans... 40 0.002 AK055571-1|BAB70960.1| 475|Homo sapiens protein ( Homo sapiens ... 39 0.003 BC015915-1|AAH15915.1| 574|Homo sapiens frizzled homolog 7 (Dro... 28 6.0 AC069148-1|AAX93250.1| 574|Homo sapiens unknown protein. 28 6.0 AB017365-1|BAA34668.1| 574|Homo sapiens frizzled-7 protein. 28 6.0 AB010881-1|BAA32424.1| 574|Homo sapiens FzE3 protein. 28 6.0 >BC048285-1|AAH48285.1| 475|Homo sapiens solute carrier family 46, member 2 protein. Length = 475 Score = 39.5 bits (88), Expect = 0.002 Identities = 24/108 (22%), Positives = 51/108 (47%) Query: 4 QDSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVA 63 +D+ + + VS +G L+ A FY A +F+ +T IRS +K + Sbjct: 346 RDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYG 405 Query: 64 KLSALIGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVAL 111 K+ ++ ++ +L + + IY T++ F G+ + + L+ +A+ Sbjct: 406 KVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAI 453 >AL139041-1|CAI95196.1| 475|Homo sapiens thymic stromal co-transporter protein. Length = 475 Score = 39.5 bits (88), Expect = 0.002 Identities = 24/108 (22%), Positives = 51/108 (47%) Query: 4 QDSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVA 63 +D+ + + VS +G L+ A FY A +F+ +T IRS +K + Sbjct: 346 RDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYG 405 Query: 64 KLSALIGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVAL 111 K+ ++ ++ +L + + IY T++ F G+ + + L+ +A+ Sbjct: 406 KVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAI 453 >AF242557-1|AAK28343.1| 475|Homo sapiens thymic stromal co-transporter protein. Length = 475 Score = 39.5 bits (88), Expect = 0.002 Identities = 24/108 (22%), Positives = 51/108 (47%) Query: 4 QDSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVA 63 +D+ + + VS +G L+ A FY A +F+ +T IRS +K + Sbjct: 346 RDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYG 405 Query: 64 KLSALIGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVAL 111 K+ ++ ++ +L + + IY T++ F G+ + + L+ +A+ Sbjct: 406 KVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAI 453 >AK055571-1|BAB70960.1| 475|Homo sapiens protein ( Homo sapiens cDNA FLJ31009 fis, clone HLUNG2000142, moderately similar to Mus musculus putative thymic stromal co-transporter TSCOT mRNA. ). Length = 475 Score = 39.1 bits (87), Expect = 0.003 Identities = 24/108 (22%), Positives = 51/108 (47%) Query: 4 QDSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVA 63 +D+ + + VS +G L+ A FY A +F+ +T IRS +K + Sbjct: 346 RDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAAMLFALIPVTTIRSAMSKLIKGSSYG 405 Query: 64 KLSALIGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVAL 111 K+ ++ ++ +L + + IY T++ F G+ + + L+ +A+ Sbjct: 406 KVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAI 453 >BC015915-1|AAH15915.1| 574|Homo sapiens frizzled homolog 7 (Drosophila) protein. Length = 574 Score = 28.3 bits (60), Expect = 6.0 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 13 GVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIAT-KSVPTEEVAKLSALIGV 71 G+S + F LAP + + F + F L IR+I TE++ KL IGV Sbjct: 414 GLSSVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGV 473 >AC069148-1|AAX93250.1| 574|Homo sapiens unknown protein. Length = 574 Score = 28.3 bits (60), Expect = 6.0 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 13 GVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIAT-KSVPTEEVAKLSALIGV 71 G+S + F LAP + + F + F L IR+I TE++ KL IGV Sbjct: 414 GLSSVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGV 473 >AB017365-1|BAA34668.1| 574|Homo sapiens frizzled-7 protein. Length = 574 Score = 28.3 bits (60), Expect = 6.0 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 13 GVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIAT-KSVPTEEVAKLSALIGV 71 G+S + F LAP + + F + F L IR+I TE++ KL IGV Sbjct: 414 GLSSVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGV 473 >AB010881-1|BAA32424.1| 574|Homo sapiens FzE3 protein. Length = 574 Score = 28.3 bits (60), Expect = 6.0 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 13 GVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIAT-KSVPTEEVAKLSALIGV 71 G S + F LAP +F+ F + F IR+I TE++ KL IGV Sbjct: 414 GFSSVDALRGFVLAPLFVYFFIGTSFLLAGFVSFFRIRTIMKHDGTKTEKLEKLMVRIGV 473 Database: human Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 73,234,838 Number of sequences in database: 224,733 Lambda K H 0.326 0.136 0.399 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,778,995 Number of Sequences: 224733 Number of extensions: 518940 Number of successful extensions: 952 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 948 Number of HSP's gapped (non-prelim): 8 length of query: 115 length of database: 73,234,838 effective HSP length: 80 effective length of query: 35 effective length of database: 55,256,198 effective search space: 1933966930 effective search space used: 1933966930 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.7 bits) S2: 59 (27.9 bits)
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