Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001909-TA|BGIBMGA001909-PA|undefined
(115 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048285-1|AAH48285.1| 475|Homo sapiens solute carrier family 4... 40 0.002
AL139041-1|CAI95196.1| 475|Homo sapiens thymic stromal co-trans... 40 0.002
AF242557-1|AAK28343.1| 475|Homo sapiens thymic stromal co-trans... 40 0.002
AK055571-1|BAB70960.1| 475|Homo sapiens protein ( Homo sapiens ... 39 0.003
BC015915-1|AAH15915.1| 574|Homo sapiens frizzled homolog 7 (Dro... 28 6.0
AC069148-1|AAX93250.1| 574|Homo sapiens unknown protein. 28 6.0
AB017365-1|BAA34668.1| 574|Homo sapiens frizzled-7 protein. 28 6.0
AB010881-1|BAA32424.1| 574|Homo sapiens FzE3 protein. 28 6.0
>BC048285-1|AAH48285.1| 475|Homo sapiens solute carrier family 46,
member 2 protein.
Length = 475
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/108 (22%), Positives = 51/108 (47%)
Query: 4 QDSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVA 63
+D+ + + VS +G L+ A FY A +F+ +T IRS +K +
Sbjct: 346 RDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYG 405
Query: 64 KLSALIGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVAL 111
K+ ++ ++ +L + + IY T++ F G+ + + L+ +A+
Sbjct: 406 KVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAI 453
>AL139041-1|CAI95196.1| 475|Homo sapiens thymic stromal
co-transporter protein.
Length = 475
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/108 (22%), Positives = 51/108 (47%)
Query: 4 QDSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVA 63
+D+ + + VS +G L+ A FY A +F+ +T IRS +K +
Sbjct: 346 RDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYG 405
Query: 64 KLSALIGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVAL 111
K+ ++ ++ +L + + IY T++ F G+ + + L+ +A+
Sbjct: 406 KVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAI 453
>AF242557-1|AAK28343.1| 475|Homo sapiens thymic stromal
co-transporter protein.
Length = 475
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/108 (22%), Positives = 51/108 (47%)
Query: 4 QDSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVA 63
+D+ + + VS +G L+ A FY A +F+ +T IRS +K +
Sbjct: 346 RDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYG 405
Query: 64 KLSALIGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVAL 111
K+ ++ ++ +L + + IY T++ F G+ + + L+ +A+
Sbjct: 406 KVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAI 453
>AK055571-1|BAB70960.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ31009 fis, clone HLUNG2000142, moderately
similar to Mus musculus putative thymic stromal
co-transporter TSCOT mRNA. ).
Length = 475
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/108 (22%), Positives = 51/108 (47%)
Query: 4 QDSIIGALAGVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIATKSVPTEEVA 63
+D+ + + VS +G L+ A FY A +F+ +T IRS +K +
Sbjct: 346 RDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAAMLFALIPVTTIRSAMSKLIKGSSYG 405
Query: 64 KLSALIGVTESLAPSIYMPASSYIYMSTIETFPGAFYLFDAALTVVAL 111
K+ ++ ++ +L + + IY T++ F G+ + + L+ +A+
Sbjct: 406 KVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAI 453
>BC015915-1|AAH15915.1| 574|Homo sapiens frizzled homolog 7
(Drosophila) protein.
Length = 574
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 13 GVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIAT-KSVPTEEVAKLSALIGV 71
G+S + F LAP + + F + F L IR+I TE++ KL IGV
Sbjct: 414 GLSSVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGV 473
>AC069148-1|AAX93250.1| 574|Homo sapiens unknown protein.
Length = 574
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 13 GVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIAT-KSVPTEEVAKLSALIGV 71
G+S + F LAP + + F + F L IR+I TE++ KL IGV
Sbjct: 414 GLSSVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGV 473
>AB017365-1|BAA34668.1| 574|Homo sapiens frizzled-7 protein.
Length = 574
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 13 GVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIAT-KSVPTEEVAKLSALIGV 71
G+S + F LAP + + F + F L IR+I TE++ KL IGV
Sbjct: 414 GLSSVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGV 473
>AB010881-1|BAA32424.1| 574|Homo sapiens FzE3 protein.
Length = 574
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 13 GVSRIAGCLMFALAPTRQWFYSAPLFNIFSFTGLTAIRSIAT-KSVPTEEVAKLSALIGV 71
G S + F LAP +F+ F + F IR+I TE++ KL IGV
Sbjct: 414 GFSSVDALRGFVLAPLFVYFFIGTSFLLAGFVSFFRIRTIMKHDGTKTEKLEKLMVRIGV 473
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.326 0.136 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,778,995
Number of Sequences: 224733
Number of extensions: 518940
Number of successful extensions: 952
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 948
Number of HSP's gapped (non-prelim): 8
length of query: 115
length of database: 73,234,838
effective HSP length: 80
effective length of query: 35
effective length of database: 55,256,198
effective search space: 1933966930
effective search space used: 1933966930
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 59 (27.9 bits)
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