GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001908-TA|BGIBMGA001908-PA|IPR011701|Major facilitator
superfamily MFS_1
         (293 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ496103-1|ABF47092.1|  459|Homo sapiens heme carrier protein 1 ...    36   0.22 
BC010691-1|AAH10691.1|  431|Homo sapiens SLC46A1 protein protein.      36   0.22 
AK054669-1|BAB70789.1|  459|Homo sapiens protein ( Homo sapiens ...    36   0.22 
BC048285-1|AAH48285.1|  475|Homo sapiens solute carrier family 4...    31   6.3  
AL139041-1|CAI95196.1|  475|Homo sapiens thymic stromal co-trans...    31   6.3  
AK055571-1|BAB70960.1|  475|Homo sapiens protein ( Homo sapiens ...    31   6.3  
AF242557-1|AAK28343.1|  475|Homo sapiens thymic stromal co-trans...    31   6.3  

>DQ496103-1|ABF47092.1|  459|Homo sapiens heme carrier protein 1
           protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.22
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 131 VGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAAFTGSYVI 190
           +GAWSD   +R + +V   +G +L     L + +  Q        ++  +  A  G +  
Sbjct: 104 LGAWSDSVGRRPL-LVLASLGLLLQ---ALVSVFVVQLQLHVGYFVLGRILCALLGDFGG 159

Query: 191 IFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLRA 236
           +    ++ +AD ++  SRTFR+ L+   + +     + L G  LRA
Sbjct: 160 LLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRA 205


>BC010691-1|AAH10691.1|  431|Homo sapiens SLC46A1 protein protein.
          Length = 431

 Score = 35.5 bits (78), Expect = 0.22
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 131 VGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAAFTGSYVI 190
           +GAWSD   +R + +V   +G +L     L + +  Q        ++  +  A  G +  
Sbjct: 104 LGAWSDSVGRRPL-LVLASLGLLLQ---ALVSVFVVQLQLHVGYFVLGRILCALLGDFGG 159

Query: 191 IFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLRA 236
           +    ++ +AD ++  SRTFR+ L+   + +     + L G  LRA
Sbjct: 160 LLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRA 205


>AK054669-1|BAB70789.1|  459|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30107 fis, clone BNGH41000198, weakly similar to
           TETRACYCLINE RESISTANCE PROTEIN, CLASS E. ).
          Length = 459

 Score = 35.5 bits (78), Expect = 0.22
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 131 VGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAAFTGSYVI 190
           +GAWSD   +R + +V   +G +L     L + +  Q        ++  +  A  G +  
Sbjct: 104 LGAWSDSVGRRPL-LVLASLGLLLQ---ALVSVFVVQLQLHVGYFVLGRILCALLGDFGG 159

Query: 191 IFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLRA 236
           +    ++ +AD ++  SRTFR+ L+   + +     + L G  LRA
Sbjct: 160 LLAASFASVADVSSSRSRTFRMALLEASIGVAGMLASLLGGHWLRA 205


>BC048285-1|AAH48285.1|  475|Homo sapiens solute carrier family 46,
           member 2 protein.
          Length = 475

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 124 PAIMVIFVGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAA 183
           P +    +G  SD+Y  RKI I    +G +LS  GLL        + +   A   AL   
Sbjct: 89  PLLSAYGLGWLSDRYH-RKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGA--AALNGL 145

Query: 184 FTGSYVIIFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLR 235
           F G +   + G+ +  +  ++   R+ RL L+ + + L    G+  SG L +
Sbjct: 146 F-GGFSAFWSGVMALGSLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFK 196


>AL139041-1|CAI95196.1|  475|Homo sapiens thymic stromal
           co-transporter protein.
          Length = 475

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 124 PAIMVIFVGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAA 183
           P +    +G  SD+Y  RKI I    +G +LS  GLL        + +   A   AL   
Sbjct: 89  PLLSAYGLGWLSDRYH-RKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGA--AALNGL 145

Query: 184 FTGSYVIIFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLR 235
           F G +   + G+ +  +  ++   R+ RL L+ + + L    G+  SG L +
Sbjct: 146 F-GGFSAFWSGVMALGSLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFK 196


>AK055571-1|BAB70960.1|  475|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31009 fis, clone HLUNG2000142, moderately
           similar to Mus musculus putative thymic stromal
           co-transporter TSCOT mRNA. ).
          Length = 475

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 124 PAIMVIFVGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAA 183
           P +    +G  SD+Y  RKI I    +G +LS  GLL        + +   A   AL   
Sbjct: 89  PLLSAYGLGWLSDRYH-RKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGA--AALNGL 145

Query: 184 FTGSYVIIFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLR 235
           F G +   + G+ +  +  ++   R+ RL L+ + + L    G+  SG L +
Sbjct: 146 F-GGFSAFWSGVMALGSLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFK 196


>AF242557-1|AAK28343.1|  475|Homo sapiens thymic stromal
           co-transporter protein.
          Length = 475

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 124 PAIMVIFVGAWSDKYKKRKICIVFPFIGEILSNTGLLFATYYFQELSLTATALIEALPAA 183
           P +    +G  SD+Y  RKI I    +G +LS  GLL        + +   A   AL   
Sbjct: 89  PLLSAYGLGWLSDRYH-RKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGA--AALNGL 145

Query: 184 FTGSYVIIFMGMYSFMADRTTVESRTFRLGLVTICVTLGTPTGTALSGILLR 235
           F G +   + G+ +  +  ++   R+ RL L+ + + L    G+  SG L +
Sbjct: 146 F-GGFSAFWSGVMALGSLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFK 196


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.325    0.136    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,405,331
Number of Sequences: 224733
Number of extensions: 1154860
Number of successful extensions: 5277
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 5274
Number of HSP's gapped (non-prelim): 7
length of query: 293
length of database: 73,234,838
effective HSP length: 89
effective length of query: 204
effective length of database: 53,233,601
effective search space: 10859654604
effective search space used: 10859654604
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 65 (30.3 bits)