Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001907-TA|BGIBMGA001907-PA|IPR011701|Major facilitator
superfamily MFS_1
(332 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 32 0.74
08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-55... 32 0.74
03_01_0204 + 1611837-1611840,1611926-1612048,1614570-1614659,161... 31 0.98
01_06_1133 + 34781799-34782071,34782168-34783166,34783252-347836... 30 3.0
05_05_0266 - 23694466-23696787,23696885-23697187 29 5.2
03_04_0047 + 16800213-16800280,16800401-16800435,16800652-168007... 29 5.2
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 29 6.9
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 28 9.1
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 31.9 bits (69), Expect = 0.74
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 216 TFRIGFVAVIVSLVLPFGISISGVLTEAVGYYGVFGLNMILYILGFIHTYFRVHNVRNQS 275
TF IG +IV+ LP V+ A+G GVFG+ ++ IL F+ + +V +
Sbjct: 672 TFWIG--DIIVTYTLP-------VMLNAIGLAGVFGIYAVVCILAFLFVFMKVPETKGMP 722
Query: 276 VE 277
+E
Sbjct: 723 LE 724
>08_01_0079 -
554936-554977,555108-555297,555384-555430,556039-556139,
556223-556271,556432-556494,556602-556695,556822-556924,
557719-557791,557872-557984,558068-558149,558386-558913,
559015-559098,560156-560305,561021-561191,561759-561809,
562601-562738,562823-562894,563236-563391,563681-563839,
564080-564180,564577-564829
Length = 939
Score = 31.9 bits (69), Expect = 0.74
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 263 HTYFRVHNVRNQSVEGNLINKIIDFFHPRNAWDSISIMFLTPLKQRIQTILVL 315
H F VH + + + NL++ ++DF R +++ +LTP ++ Q +L +
Sbjct: 315 HLVFMVHGIGQRLEKANLVDDVVDF---RRVTANLAERYLTPYQRSTQRVLFI 364
>03_01_0204 +
1611837-1611840,1611926-1612048,1614570-1614659,
1615529-1616095,1616235-1616959,1617065-1617252,
1617331-1617778
Length = 714
Score = 31.5 bits (68), Expect = 0.98
Identities = 16/76 (21%), Positives = 37/76 (48%)
Query: 182 ALIEALPSALSGGSSIAFMGSYSYIADVTTLESRTFRIGFVAVIVSLVLPFGISISGVLT 241
A++ ++ + L G + A G+ YI + L++ G + + + ++SG++T
Sbjct: 54 AIVASIGNLLQGWDNAAIAGAIMYIKNEFNLQNDPMMEGLILAMSLIGATIITALSGMIT 113
Query: 242 EAVGYYGVFGLNMILY 257
++G + + ILY
Sbjct: 114 NSIGKRPLLSVAAILY 129
>01_06_1133 +
34781799-34782071,34782168-34783166,34783252-34783663,
34783727-34784670
Length = 875
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/26 (50%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 226 VSLVLPFGISISGVLTEAVGYYGVFG 251
VSL+L G+ ++GV T+A+G + VFG
Sbjct: 291 VSLILT-GVMLAGVCTDAIGIHSVFG 315
>05_05_0266 - 23694466-23696787,23696885-23697187
Length = 874
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 224 VIVSLVLPFGISISGVLTEAVGYYGVFG 251
V ++L+L G+ ++GV T+A+G + VFG
Sbjct: 299 VHITLILT-GVMVAGVCTDAIGIHSVFG 325
>03_04_0047 +
16800213-16800280,16800401-16800435,16800652-16800754,
16801333-16801537,16801565-16801647,16801986-16802016,
16802092-16802148,16802374-16802514,16802726-16802779,
16802915-16802962,16803106-16803153
Length = 290
Score = 29.1 bits (62), Expect = 5.2
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 135 ILFVGAW-SDRTGNRKALMLIPLIGEIISSFGLILT-TYFFLEWPLWATALIEALPSALS 192
I+F+G + + + R L+ L + LI+T T F L + + L + L+
Sbjct: 105 IIFIGQYINSQVAQRVISQLVTLAAVDEEADILIITVTLLFTAAALDCSTSLPWL-APLA 163
Query: 193 GGSSIAFMGSYSYIADVTTLESRTFRIGF 221
+ IAF G +YI D++ + T IGF
Sbjct: 164 HSTDIAFTGKPNYILDMSICHAETVLIGF 192
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 178 LWATALIEALPSALSGGSSIAFMGSYSYIADVTTLESRT 216
+W AL+E PS LSG + + DV +E T
Sbjct: 200 MWIVALVEVRPSLLSGEAEKFLFEDIYQVGDVVLVEDET 238
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 239 VLTEAVGYYGVFGLNMILYILGFIHTYFRVHNVRNQSVE 277
V+ A+G GVFG+ ++ + F+ + +V + +E
Sbjct: 719 VMLNAIGLAGVFGIYAVVCSIAFVFVFLKVPETKGMPLE 757
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.138 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,870,920
Number of Sequences: 37544
Number of extensions: 333875
Number of successful extensions: 772
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 767
Number of HSP's gapped (non-prelim): 9
length of query: 332
length of database: 14,793,348
effective HSP length: 82
effective length of query: 250
effective length of database: 11,714,740
effective search space: 2928685000
effective search space used: 2928685000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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