BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001906-TA|BGIBMGA001906-PA|IPR010294|ADAM-TS Spacer 1, IPR010909|PLAC, IPR000884|Thrombospondin, type I (535 letters) Database: bee 429 sequences; 140,377 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 24 3.6 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.8 AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 4.8 >AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. Length = 147 Score = 23.8 bits (49), Expect = 3.6 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 1/70 (1%) Query: 263 PIGRRRRCGNVPCPPRWRAASWSPCPRCGPATRTRIVGCVQDHSKGITKI-SDHKCPPPK 321 P G +VP PPR S+ P + G I I K PP Sbjct: 46 PFGVENTISSVPQPPRSLEGSYDSSSGDSPVSSHSSNGIHTGFGGSIITIPPTRKLPPLH 105 Query: 322 PPTTEMCNIP 331 P T + ++P Sbjct: 106 PHTAMVTHLP 115 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 23.4 bits (48), Expect = 4.8 Identities = 15/47 (31%), Positives = 18/47 (38%) Query: 291 GPATRTRIVGCVQDHSKGITKISDHKCPPPKPPTTEMCNIPNCDDLS 337 G TRT D I+ + D + P P PP NI D S Sbjct: 625 GMRTRTVCGVAAGDPPLTISWLKDGQSPFPLPPNLASANISQLDPYS 671 >AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase alpha 1 subunit protein. Length = 699 Score = 23.4 bits (48), Expect = 4.8 Identities = 13/40 (32%), Positives = 18/40 (45%) Query: 230 SCGGGIQLGKYRCVESTSSGDREVSSVHCTGSPPIGRRRR 269 +C L K C E TS GD + S + G G+ R+ Sbjct: 2 ACPFSRDLSKPGCDEQTSRGDNDRSRIARLGRDDGGKSRQ 41 Database: bee Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 140,377 Number of sequences in database: 429 Lambda K H 0.320 0.135 0.428 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 172,465 Number of Sequences: 429 Number of extensions: 8442 Number of successful extensions: 8 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 5 Number of HSP's gapped (non-prelim): 3 length of query: 535 length of database: 140,377 effective HSP length: 61 effective length of query: 474 effective length of database: 114,208 effective search space: 54134592 effective search space used: 54134592 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 46 (22.6 bits)
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