BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001905-TA|BGIBMGA001905-PA|IPR013017|NHL, IPR000720|Peptidyl-glycine alpha-amidating monooxygenase, IPR011044|Quinoprotein amine dehydrogenase, beta chain-like, IPR001258|NHL repeat (370 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_02_0186 + 7594197-7594281,7594409-7594513,7595062-7595238,759... 31 1.5 09_06_0245 - 21833622-21833901,21833988-21834059,21834152-218342... 31 2.0 05_03_0216 + 10370531-10371922,10378656-10378808 30 2.6 03_06_0071 + 31465707-31466237,31467455-31468075,31468438-314685... 30 2.6 02_05_0577 - 30100084-30100251,30100474-30100548,30100631-301007... 30 2.6 08_02_0665 + 19818500-19819013,19819169-19819260,19819435-198200... 30 3.4 07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 29 6.0 07_01_1086 - 9930311-9931993 29 6.0 07_01_1081 + 9831606-9832499 29 6.0 10_01_0300 - 3257584-3258825 29 7.9 08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417 29 7.9 07_03_0779 - 21464249-21464257,21465400-21466374 29 7.9 06_03_1496 - 30567968-30568210,30568345-30568513,30568635-305687... 29 7.9 04_01_0348 + 4563391-4563689,4563965-4564145,4564186-4564467 29 7.9 04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 29 7.9 03_02_0920 + 12410551-12410893,12410992-12411095,12411192-124112... 29 7.9 02_03_0161 + 15828887-15828985,15829066-15829686,15829759-158299... 29 7.9 01_01_0761 - 5874953-5876803 29 7.9 >02_02_0186 + 7594197-7594281,7594409-7594513,7595062-7595238, 7595716-7595886,7596198-7596289,7596302-7596407, 7597516-7597601,7597861-7598501,7599065-7599107 Length = 501 Score = 31.1 bits (67), Expect = 1.5 Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 14/120 (11%) Query: 188 FCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLL-----TIPAYSDTWSLNLPHSVT 242 F PT VA+ TG ++VAD N I K +G + IP Y D S + S Sbjct: 149 FKRPTGVAVDDTGNVYVAD-TANLAIRKIGESGVTTIAGGKSNIPGYRDGPSEDAKFSTD 207 Query: 243 LLEHLDLVCVADREN---MRIVCPKAGLKSYADPL----EPPTIIEDPTLGRVFAVTSHG 295 + + V DR N +I P+ +Y D + +I G +F+V HG Sbjct: 208 FDVKMCSLLVIDRGNAALRKIALPQEDC-TYQDATLLSSDIILVIGAVVAGYIFSVVQHG 266 >09_06_0245 - 21833622-21833901,21833988-21834059,21834152-21834231, 21834366-21835109,21835212-21835547 Length = 503 Score = 30.7 bits (66), Expect = 2.0 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 11/147 (7%) Query: 198 STGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDTWSLNLPHSVTLLEHLDLVCVADREN 257 +TG+ A N++++ N L I A + + NL S +E + D+ + Sbjct: 346 ATGDDDSASDLANDKVLVENTKKELS-RIQAELSSTNRNLNFSDQQIEAISTRLPVDKSD 404 Query: 258 MRIVCPKAGLKSYADPL------EPPTIIEDPTLGRVFAVTSHGDTIYAVNGPTSQNIAV 311 ++ PKA + D + E +E+ R +T GD A +N Sbjct: 405 LKTFFPKAWCDEHGDNVINVAKKEFKEHVEEMEKQR--DITGGGDGWVAFGDSHDENFNP 462 Query: 312 RGFTVN--AVYGNILDTWEPTTGFTNP 336 R F+ + AV GN+ D+ + FTNP Sbjct: 463 RAFSQHQAAVKGNVHDSLSSSQHFTNP 489 >05_03_0216 + 10370531-10371922,10378656-10378808 Length = 514 Score = 30.3 bits (65), Expect = 2.6 Identities = 15/60 (25%), Positives = 32/60 (53%) Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89 Y A DV + ++++ K +L+P ++ +W ++ + + IT + S G I+ DR+ Sbjct: 154 YVAVCDVCQRVKAEHQKPASLLQPLKIPEWKREEIGMDFITGLPRTSSGHDSIWVIVDRL 213 >03_06_0071 + 31465707-31466237,31467455-31468075,31468438-31468520, 31468895-31468979 Length = 439 Score = 30.3 bits (65), Expect = 2.6 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Query: 333 FTNPHSLAVTRNGSHLYVSEIGPNKIW 359 FT+PHS+ + NGS L S P++IW Sbjct: 206 FTHPHSIGLLTNGS-LLASNNDPSRIW 231 >02_05_0577 - 30100084-30100251,30100474-30100548,30100631-30100755, 30101538-30101609,30102016-30102108,30102333-30102419, 30103049-30103135,30103448-30103522,30104142-30104238 Length = 292 Score = 30.3 bits (65), Expect = 2.6 Identities = 14/53 (26%), Positives = 27/53 (50%) Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDK 106 Q++ P+ SL + + + S P H+ DR+++E E +Y+ FD+ Sbjct: 223 QQIIQSPRVSLQANENSMILATSRFSPQESHQHDRLYEEQISTEHWSYEEFDR 275 >08_02_0665 + 19818500-19819013,19819169-19819260,19819435-19820056, 19820575-19820775,19821327-19821395,19821428-19821522, 19821608-19822153 Length = 712 Score = 29.9 bits (64), Expect = 3.4 Identities = 14/31 (45%), Positives = 16/31 (51%) Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPS 163 F P L +DH DNV+V D V K PS Sbjct: 379 FDRPRSLAVDHADNVYVADRMNGAVRKIAPS 409 >07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589, 27298701-27298766,27299151-27302660,27311604-27312224 Length = 1676 Score = 29.1 bits (62), Expect = 6.0 Identities = 15/60 (25%), Positives = 31/60 (51%) Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89 Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+ Sbjct: 1385 YVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 1444 >07_01_1086 - 9930311-9931993 Length = 560 Score = 29.1 bits (62), Expect = 6.0 Identities = 15/60 (25%), Positives = 31/60 (51%) Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89 Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+ Sbjct: 168 YVAVCDVCQRVKAEHQKPASLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 227 >07_01_1081 + 9831606-9832499 Length = 297 Score = 29.1 bits (62), Expect = 6.0 Identities = 15/60 (25%), Positives = 31/60 (51%) Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89 Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+ Sbjct: 73 YVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 132 >10_01_0300 - 3257584-3258825 Length = 413 Score = 28.7 bits (61), Expect = 7.9 Identities = 15/60 (25%), Positives = 31/60 (51%) Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89 Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+ Sbjct: 21 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 80 >08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417 Length = 447 Score = 28.7 bits (61), Expect = 7.9 Identities = 15/60 (25%), Positives = 31/60 (51%) Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89 Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+ Sbjct: 154 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 213 >07_03_0779 - 21464249-21464257,21465400-21466374 Length = 327 Score = 28.7 bits (61), Expect = 7.9 Identities = 12/28 (42%), Positives = 19/28 (67%) Query: 331 TGFTNPHSLAVTRNGSHLYVSEIGPNKI 358 +G T P+ LA++ + SHL V+ GP K+ Sbjct: 220 SGMTYPNGLAISADRSHLVVALTGPCKL 247 >06_03_1496 - 30567968-30568210,30568345-30568513,30568635-30568736, 30569087-30571855,30572402-30572430,30572546-30572659, 30572735-30572846,30574730-30574845,30574928-30575068, 30575121-30575243,30575346-30575478,30575842-30575972, 30576065-30576300,30577073-30577376 Length = 1573 Score = 28.7 bits (61), Expect = 7.9 Identities = 12/23 (52%), Positives = 13/23 (56%) Query: 321 GNILDTWEPTTGFTNPHSLAVTR 343 GN TWEP F PH+ AV R Sbjct: 258 GNFYLTWEPGQPFWQPHNRAVAR 280 >04_01_0348 + 4563391-4563689,4563965-4564145,4564186-4564467 Length = 253 Score = 28.7 bits (61), Expect = 7.9 Identities = 15/44 (34%), Positives = 24/44 (54%) Query: 186 VLFCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAY 229 V+ C + VAI S GEI + G + + A+ +LL+ PA+ Sbjct: 34 VVHCRDSFVAIGSLGEISMFSGNNTDGVALLTASPSLLMPPPAH 77 >04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309, 3914729-3914823,3914854-3915213 Length = 1428 Score = 28.7 bits (61), Expect = 7.9 Identities = 15/60 (25%), Positives = 31/60 (51%) Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89 Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+ Sbjct: 1047 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1106 >03_02_0920 + 12410551-12410893,12410992-12411095,12411192-12411297, 12411388-12411607,12411733-12411917,12411988-12412103, 12412208-12412279,12412551-12412598 Length = 397 Score = 28.7 bits (61), Expect = 7.9 Identities = 10/33 (30%), Positives = 19/33 (57%) Query: 136 PHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYP 168 P + +D D++++TD ++ Y +N RYP Sbjct: 301 PLNILIDSDDHIYITDFGISKIKPYPSANVRYP 333 >02_03_0161 + 15828887-15828985,15829066-15829686,15829759-15829908, 15829994-15830389,15830455-15830487,15830553-15830693, 15830793-15830924,15830999-15831082,15831159-15831461, 15831543-15831734,15831805-15831942,15832019-15832143, 15832223-15832319 Length = 836 Score = 28.7 bits (61), Expect = 7.9 Identities = 11/39 (28%), Positives = 24/39 (61%) Query: 238 PHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEP 276 PH ++LL+ + L ++ E+ +++ AG+K + L+P Sbjct: 598 PHDLSLLDEVTLSYISKSEDKKLLSTIAGIKIFRQHLKP 636 >01_01_0761 - 5874953-5876803 Length = 616 Score = 28.7 bits (61), Expect = 7.9 Identities = 16/57 (28%), Positives = 23/57 (40%) Query: 283 PTLGRVFAVTSHGDTIYAVNGPTSQNIAVRGFTVNAVYGNILDTWEPTTGFTNPHSL 339 P L +V AV S G + I+ G+ + YG I TW F N + + Sbjct: 389 PPLEKVTAVASRGPGNEYYQTTAFRRISAAGWVQTSSYGKITATWTQRFSFVNTNQV 445 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.319 0.137 0.426 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,590,126 Number of Sequences: 37544 Number of extensions: 500945 Number of successful extensions: 998 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 978 Number of HSP's gapped (non-prelim): 24 length of query: 370 length of database: 14,793,348 effective HSP length: 83 effective length of query: 287 effective length of database: 11,677,196 effective search space: 3351355252 effective search space used: 3351355252 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 61 (28.7 bits)
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