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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001905-TA|BGIBMGA001905-PA|IPR013017|NHL,
IPR000720|Peptidyl-glycine alpha-amidating monooxygenase,
IPR011044|Quinoprotein amine dehydrogenase, beta chain-like,
IPR001258|NHL repeat
         (370 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0186 + 7594197-7594281,7594409-7594513,7595062-7595238,759...    31   1.5  
09_06_0245 - 21833622-21833901,21833988-21834059,21834152-218342...    31   2.0  
05_03_0216 + 10370531-10371922,10378656-10378808                       30   2.6  
03_06_0071 + 31465707-31466237,31467455-31468075,31468438-314685...    30   2.6  
02_05_0577 - 30100084-30100251,30100474-30100548,30100631-301007...    30   2.6  
08_02_0665 + 19818500-19819013,19819169-19819260,19819435-198200...    30   3.4  
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985...    29   6.0  
07_01_1086 - 9930311-9931993                                           29   6.0  
07_01_1081 + 9831606-9832499                                           29   6.0  
10_01_0300 - 3257584-3258825                                           29   7.9  
08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417           29   7.9  
07_03_0779 - 21464249-21464257,21465400-21466374                       29   7.9  
06_03_1496 - 30567968-30568210,30568345-30568513,30568635-305687...    29   7.9  
04_01_0348 + 4563391-4563689,4563965-4564145,4564186-4564467           29   7.9  
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391...    29   7.9  
03_02_0920 + 12410551-12410893,12410992-12411095,12411192-124112...    29   7.9  
02_03_0161 + 15828887-15828985,15829066-15829686,15829759-158299...    29   7.9  
01_01_0761 - 5874953-5876803                                           29   7.9  

>02_02_0186 +
           7594197-7594281,7594409-7594513,7595062-7595238,
           7595716-7595886,7596198-7596289,7596302-7596407,
           7597516-7597601,7597861-7598501,7599065-7599107
          Length = 501

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 14/120 (11%)

Query: 188 FCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLL-----TIPAYSDTWSLNLPHSVT 242
           F  PT VA+  TG ++VAD   N  I K   +G   +      IP Y D  S +   S  
Sbjct: 149 FKRPTGVAVDDTGNVYVAD-TANLAIRKIGESGVTTIAGGKSNIPGYRDGPSEDAKFSTD 207

Query: 243 LLEHLDLVCVADREN---MRIVCPKAGLKSYADPL----EPPTIIEDPTLGRVFAVTSHG 295
               +  + V DR N    +I  P+    +Y D      +   +I     G +F+V  HG
Sbjct: 208 FDVKMCSLLVIDRGNAALRKIALPQEDC-TYQDATLLSSDIILVIGAVVAGYIFSVVQHG 266


>09_06_0245 -
           21833622-21833901,21833988-21834059,21834152-21834231,
           21834366-21835109,21835212-21835547
          Length = 503

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 11/147 (7%)

Query: 198 STGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDTWSLNLPHSVTLLEHLDLVCVADREN 257
           +TG+   A    N++++  N    L   I A   + + NL  S   +E +      D+ +
Sbjct: 346 ATGDDDSASDLANDKVLVENTKKELS-RIQAELSSTNRNLNFSDQQIEAISTRLPVDKSD 404

Query: 258 MRIVCPKAGLKSYADPL------EPPTIIEDPTLGRVFAVTSHGDTIYAVNGPTSQNIAV 311
           ++   PKA    + D +      E    +E+    R   +T  GD   A      +N   
Sbjct: 405 LKTFFPKAWCDEHGDNVINVAKKEFKEHVEEMEKQR--DITGGGDGWVAFGDSHDENFNP 462

Query: 312 RGFTVN--AVYGNILDTWEPTTGFTNP 336
           R F+ +  AV GN+ D+   +  FTNP
Sbjct: 463 RAFSQHQAAVKGNVHDSLSSSQHFTNP 489


>05_03_0216 + 10370531-10371922,10378656-10378808
          Length = 514

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/60 (25%), Positives = 32/60 (53%)

Query: 30  YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
           Y A  DV + ++++  K   +L+P ++ +W ++ + +  IT +   S G   I+   DR+
Sbjct: 154 YVAVCDVCQRVKAEHQKPASLLQPLKIPEWKREEIGMDFITGLPRTSSGHDSIWVIVDRL 213


>03_06_0071 +
           31465707-31466237,31467455-31468075,31468438-31468520,
           31468895-31468979
          Length = 439

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)

Query: 333 FTNPHSLAVTRNGSHLYVSEIGPNKIW 359
           FT+PHS+ +  NGS L  S   P++IW
Sbjct: 206 FTHPHSIGLLTNGS-LLASNNDPSRIW 231


>02_05_0577 -
           30100084-30100251,30100474-30100548,30100631-30100755,
           30101538-30101609,30102016-30102108,30102333-30102419,
           30103049-30103135,30103448-30103522,30104142-30104238
          Length = 292

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/53 (26%), Positives = 27/53 (50%)

Query: 54  QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDK 106
           Q++   P+ SL   + + +   S   P   H+ DR+++E    E  +Y+ FD+
Sbjct: 223 QQIIQSPRVSLQANENSMILATSRFSPQESHQHDRLYEEQISTEHWSYEEFDR 275


>08_02_0665 +
           19818500-19819013,19819169-19819260,19819435-19820056,
           19820575-19820775,19821327-19821395,19821428-19821522,
           19821608-19822153
          Length = 712

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPS 163
           F  P  L +DH DNV+V D     V K  PS
Sbjct: 379 FDRPRSLAVDHADNVYVADRMNGAVRKIAPS 409


>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
            27298701-27298766,27299151-27302660,27311604-27312224
          Length = 1676

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 30   YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
            Y A  DV + ++++  K   +L+P ++ +W  + + +  IT +   S G   I+   DR+
Sbjct: 1385 YVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 1444


>07_01_1086 - 9930311-9931993
          Length = 560

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 30  YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
           Y A  DV + ++++  K   +L+P ++ +W  + + +  IT +   S G   I+   DR+
Sbjct: 168 YVAVCDVCQRVKAEHQKPASLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 227


>07_01_1081 + 9831606-9832499
          Length = 297

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 30  YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
           Y A  DV + ++++  K   +L+P ++ +W  + + +  IT +   S G   I+   DR+
Sbjct: 73  YVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 132


>10_01_0300 - 3257584-3258825
          Length = 413

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
          Y A  DV + ++++  K   +L+P ++ +W  + + +  IT +   S G   I+   DR+
Sbjct: 21 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 80


>08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417
          Length = 447

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 30  YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
           Y A  DV + ++++  K   +L+P ++ +W  + + +  IT +   S G   I+   DR+
Sbjct: 154 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 213


>07_03_0779 - 21464249-21464257,21465400-21466374
          Length = 327

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 331 TGFTNPHSLAVTRNGSHLYVSEIGPNKI 358
           +G T P+ LA++ + SHL V+  GP K+
Sbjct: 220 SGMTYPNGLAISADRSHLVVALTGPCKL 247


>06_03_1496 -
           30567968-30568210,30568345-30568513,30568635-30568736,
           30569087-30571855,30572402-30572430,30572546-30572659,
           30572735-30572846,30574730-30574845,30574928-30575068,
           30575121-30575243,30575346-30575478,30575842-30575972,
           30576065-30576300,30577073-30577376
          Length = 1573

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/23 (52%), Positives = 13/23 (56%)

Query: 321 GNILDTWEPTTGFTNPHSLAVTR 343
           GN   TWEP   F  PH+ AV R
Sbjct: 258 GNFYLTWEPGQPFWQPHNRAVAR 280


>04_01_0348 + 4563391-4563689,4563965-4564145,4564186-4564467
          Length = 253

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 186 VLFCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAY 229
           V+ C  + VAI S GEI +  G   + +    A+ +LL+  PA+
Sbjct: 34  VVHCRDSFVAIGSLGEISMFSGNNTDGVALLTASPSLLMPPPAH 77


>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
            3914729-3914823,3914854-3915213
          Length = 1428

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 30   YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
            Y A  DV + ++++  K   +L+P ++ +W  + + +  IT +   S G   I+   DR+
Sbjct: 1047 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1106


>03_02_0920 +
           12410551-12410893,12410992-12411095,12411192-12411297,
           12411388-12411607,12411733-12411917,12411988-12412103,
           12412208-12412279,12412551-12412598
          Length = 397

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 136 PHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYP 168
           P  + +D  D++++TD    ++  Y  +N RYP
Sbjct: 301 PLNILIDSDDHIYITDFGISKIKPYPSANVRYP 333


>02_03_0161 +
           15828887-15828985,15829066-15829686,15829759-15829908,
           15829994-15830389,15830455-15830487,15830553-15830693,
           15830793-15830924,15830999-15831082,15831159-15831461,
           15831543-15831734,15831805-15831942,15832019-15832143,
           15832223-15832319
          Length = 836

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/39 (28%), Positives = 24/39 (61%)

Query: 238 PHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEP 276
           PH ++LL+ + L  ++  E+ +++   AG+K +   L+P
Sbjct: 598 PHDLSLLDEVTLSYISKSEDKKLLSTIAGIKIFRQHLKP 636


>01_01_0761 - 5874953-5876803
          Length = 616

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/57 (28%), Positives = 23/57 (40%)

Query: 283 PTLGRVFAVTSHGDTIYAVNGPTSQNIAVRGFTVNAVYGNILDTWEPTTGFTNPHSL 339
           P L +V AV S G           + I+  G+   + YG I  TW     F N + +
Sbjct: 389 PPLEKVTAVASRGPGNEYYQTTAFRRISAAGWVQTSSYGKITATWTQRFSFVNTNQV 445


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.319    0.137    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,590,126
Number of Sequences: 37544
Number of extensions: 500945
Number of successful extensions: 998
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 978
Number of HSP's gapped (non-prelim): 24
length of query: 370
length of database: 14,793,348
effective HSP length: 83
effective length of query: 287
effective length of database: 11,677,196
effective search space: 3351355252
effective search space used: 3351355252
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)

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