Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001905-TA|BGIBMGA001905-PA|IPR013017|NHL,
IPR000720|Peptidyl-glycine alpha-amidating monooxygenase,
IPR011044|Quinoprotein amine dehydrogenase, beta chain-like,
IPR001258|NHL repeat
(370 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0186 + 7594197-7594281,7594409-7594513,7595062-7595238,759... 31 1.5
09_06_0245 - 21833622-21833901,21833988-21834059,21834152-218342... 31 2.0
05_03_0216 + 10370531-10371922,10378656-10378808 30 2.6
03_06_0071 + 31465707-31466237,31467455-31468075,31468438-314685... 30 2.6
02_05_0577 - 30100084-30100251,30100474-30100548,30100631-301007... 30 2.6
08_02_0665 + 19818500-19819013,19819169-19819260,19819435-198200... 30 3.4
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 29 6.0
07_01_1086 - 9930311-9931993 29 6.0
07_01_1081 + 9831606-9832499 29 6.0
10_01_0300 - 3257584-3258825 29 7.9
08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417 29 7.9
07_03_0779 - 21464249-21464257,21465400-21466374 29 7.9
06_03_1496 - 30567968-30568210,30568345-30568513,30568635-305687... 29 7.9
04_01_0348 + 4563391-4563689,4563965-4564145,4564186-4564467 29 7.9
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 29 7.9
03_02_0920 + 12410551-12410893,12410992-12411095,12411192-124112... 29 7.9
02_03_0161 + 15828887-15828985,15829066-15829686,15829759-158299... 29 7.9
01_01_0761 - 5874953-5876803 29 7.9
>02_02_0186 +
7594197-7594281,7594409-7594513,7595062-7595238,
7595716-7595886,7596198-7596289,7596302-7596407,
7597516-7597601,7597861-7598501,7599065-7599107
Length = 501
Score = 31.1 bits (67), Expect = 1.5
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 14/120 (11%)
Query: 188 FCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLL-----TIPAYSDTWSLNLPHSVT 242
F PT VA+ TG ++VAD N I K +G + IP Y D S + S
Sbjct: 149 FKRPTGVAVDDTGNVYVAD-TANLAIRKIGESGVTTIAGGKSNIPGYRDGPSEDAKFSTD 207
Query: 243 LLEHLDLVCVADREN---MRIVCPKAGLKSYADPL----EPPTIIEDPTLGRVFAVTSHG 295
+ + V DR N +I P+ +Y D + +I G +F+V HG
Sbjct: 208 FDVKMCSLLVIDRGNAALRKIALPQEDC-TYQDATLLSSDIILVIGAVVAGYIFSVVQHG 266
>09_06_0245 -
21833622-21833901,21833988-21834059,21834152-21834231,
21834366-21835109,21835212-21835547
Length = 503
Score = 30.7 bits (66), Expect = 2.0
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 198 STGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDTWSLNLPHSVTLLEHLDLVCVADREN 257
+TG+ A N++++ N L I A + + NL S +E + D+ +
Sbjct: 346 ATGDDDSASDLANDKVLVENTKKELS-RIQAELSSTNRNLNFSDQQIEAISTRLPVDKSD 404
Query: 258 MRIVCPKAGLKSYADPL------EPPTIIEDPTLGRVFAVTSHGDTIYAVNGPTSQNIAV 311
++ PKA + D + E +E+ R +T GD A +N
Sbjct: 405 LKTFFPKAWCDEHGDNVINVAKKEFKEHVEEMEKQR--DITGGGDGWVAFGDSHDENFNP 462
Query: 312 RGFTVN--AVYGNILDTWEPTTGFTNP 336
R F+ + AV GN+ D+ + FTNP
Sbjct: 463 RAFSQHQAAVKGNVHDSLSSSQHFTNP 489
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/60 (25%), Positives = 32/60 (53%)
Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
Y A DV + ++++ K +L+P ++ +W ++ + + IT + S G I+ DR+
Sbjct: 154 YVAVCDVCQRVKAEHQKPASLLQPLKIPEWKREEIGMDFITGLPRTSSGHDSIWVIVDRL 213
>03_06_0071 +
31465707-31466237,31467455-31468075,31468438-31468520,
31468895-31468979
Length = 439
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 333 FTNPHSLAVTRNGSHLYVSEIGPNKIW 359
FT+PHS+ + NGS L S P++IW
Sbjct: 206 FTHPHSIGLLTNGS-LLASNNDPSRIW 231
>02_05_0577 -
30100084-30100251,30100474-30100548,30100631-30100755,
30101538-30101609,30102016-30102108,30102333-30102419,
30103049-30103135,30103448-30103522,30104142-30104238
Length = 292
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDK 106
Q++ P+ SL + + + S P H+ DR+++E E +Y+ FD+
Sbjct: 223 QQIIQSPRVSLQANENSMILATSRFSPQESHQHDRLYEEQISTEHWSYEEFDR 275
>08_02_0665 +
19818500-19819013,19819169-19819260,19819435-19820056,
19820575-19820775,19821327-19821395,19821428-19821522,
19821608-19822153
Length = 712
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPS 163
F P L +DH DNV+V D V K PS
Sbjct: 379 FDRPRSLAVDHADNVYVADRMNGAVRKIAPS 409
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+
Sbjct: 1385 YVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 1444
>07_01_1086 - 9930311-9931993
Length = 560
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+
Sbjct: 168 YVAVCDVCQRVKAEHQKPASLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 227
>07_01_1081 + 9831606-9832499
Length = 297
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+
Sbjct: 73 YVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRL 132
>10_01_0300 - 3257584-3258825
Length = 413
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+
Sbjct: 21 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 80
>08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417
Length = 447
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+
Sbjct: 154 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 213
>07_03_0779 - 21464249-21464257,21465400-21466374
Length = 327
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 331 TGFTNPHSLAVTRNGSHLYVSEIGPNKI 358
+G T P+ LA++ + SHL V+ GP K+
Sbjct: 220 SGMTYPNGLAISADRSHLVVALTGPCKL 247
>06_03_1496 -
30567968-30568210,30568345-30568513,30568635-30568736,
30569087-30571855,30572402-30572430,30572546-30572659,
30572735-30572846,30574730-30574845,30574928-30575068,
30575121-30575243,30575346-30575478,30575842-30575972,
30576065-30576300,30577073-30577376
Length = 1573
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 321 GNILDTWEPTTGFTNPHSLAVTR 343
GN TWEP F PH+ AV R
Sbjct: 258 GNFYLTWEPGQPFWQPHNRAVAR 280
>04_01_0348 + 4563391-4563689,4563965-4564145,4564186-4564467
Length = 253
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 186 VLFCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAY 229
V+ C + VAI S GEI + G + + A+ +LL+ PA+
Sbjct: 34 VVHCRDSFVAIGSLGEISMFSGNNTDGVALLTASPSLLMPPPAH 77
>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 30 YGANDDVLKNLESQLSKDEVVLRPQEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRV 89
Y A DV + ++++ K +L+P ++ +W + + + IT + S G I+ DR+
Sbjct: 1047 YVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRL 1106
>03_02_0920 +
12410551-12410893,12410992-12411095,12411192-12411297,
12411388-12411607,12411733-12411917,12411988-12412103,
12412208-12412279,12412551-12412598
Length = 397
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 136 PHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYP 168
P + +D D++++TD ++ Y +N RYP
Sbjct: 301 PLNILIDSDDHIYITDFGISKIKPYPSANVRYP 333
>02_03_0161 +
15828887-15828985,15829066-15829686,15829759-15829908,
15829994-15830389,15830455-15830487,15830553-15830693,
15830793-15830924,15830999-15831082,15831159-15831461,
15831543-15831734,15831805-15831942,15832019-15832143,
15832223-15832319
Length = 836
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 238 PHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEP 276
PH ++LL+ + L ++ E+ +++ AG+K + L+P
Sbjct: 598 PHDLSLLDEVTLSYISKSEDKKLLSTIAGIKIFRQHLKP 636
>01_01_0761 - 5874953-5876803
Length = 616
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 283 PTLGRVFAVTSHGDTIYAVNGPTSQNIAVRGFTVNAVYGNILDTWEPTTGFTNPHSL 339
P L +V AV S G + I+ G+ + YG I TW F N + +
Sbjct: 389 PPLEKVTAVASRGPGNEYYQTTAFRRISAAGWVQTSSYGKITATWTQRFSFVNTNQV 445
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.137 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,590,126
Number of Sequences: 37544
Number of extensions: 500945
Number of successful extensions: 998
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 978
Number of HSP's gapped (non-prelim): 24
length of query: 370
length of database: 14,793,348
effective HSP length: 83
effective length of query: 287
effective length of database: 11,677,196
effective search space: 3351355252
effective search space used: 3351355252
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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