BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001905-TA|BGIBMGA001905-PA|IPR013017|NHL, IPR000720|Peptidyl-glycine alpha-amidating monooxygenase, IPR011044|Quinoprotein amine dehydrogenase, beta chain-like, IPR001258|NHL repeat (370 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34) 152 5e-37 SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36) 82 8e-16 SB_24569| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-05 SB_3355| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001 SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002 SB_27124| Best HMM Match : NHL (HMM E-Value=6.4e-17) 35 0.12 SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 33 0.37 SB_42304| Best HMM Match : NHL (HMM E-Value=0) 33 0.49 SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65 SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 31 1.1 SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5 SB_11461| Best HMM Match : NHL (HMM E-Value=0) 31 2.0 SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 30 2.6 SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0) 29 6.1 SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 SB_29120| Best HMM Match : 7tm_1 (HMM E-Value=1e-07) 29 6.1 SB_46018| Best HMM Match : I-set (HMM E-Value=0.025) 29 8.0 SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0 SB_24398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0 >SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34) Length = 750 Score = 152 bits (368), Expect = 5e-37 Identities = 96/245 (39%), Positives = 129/245 (52%), Gaps = 26/245 (10%) Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPT 192 FYMPHGLT+DH DN W+TDVA HQV+KY P L +GE G +H FC P Sbjct: 150 FYMPHGLTIDHEDNTWITDVALHQVHKYGTDGSSEPVLVLGEMLRPGSDDKH---FCQPN 206 Query: 193 SVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDTWSLNLP---------HSVTL 243 VAI +TG +VADGYCN++++KF+ G LL L P HS+ L Sbjct: 207 DVAIETTGVFYVADGYCNSRVMKFSPEGKLLEQYGKAMSARGLGSPPPLGVFDVVHSLAL 266 Query: 244 LEHLDLVCVADRENMRIVCPKAGLKSYADPLEPPTIIEDPTLGRVFAV--TSH-GDTIYA 300 + + VADREN R+ + K E I V+AV SH G ++ Sbjct: 267 DQTHHHLYVADRENGRV--QRLDTKKGRFDRE---ITNKEFGASVYAVDFNSHDGGVLHV 321 Query: 301 VNGPT---SQNIAVRGFTVNAVYGNILDTWEPTTG--FTNPHSLAVTRNGSHLYVSEIGP 355 VNG + + IAV+GFTV G +L W P G FT PH +A + + + L+V++ GP Sbjct: 322 VNGESVFGGKRIAVQGFTVRTSDGALLGKW-PGQGNFFTQPHDIASSADNNELFVTQTGP 380 Query: 356 NKIWK 360 N++WK Sbjct: 381 NRVWK 385 Score = 39.1 bits (87), Expect = 0.006 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 51 LRPQEVKDWPQQSLN-VGQITAVSINSLGQPVIFHRADRVWD 91 LR V++WP +GQ++AV+++ G V+FHR R WD Sbjct: 106 LRYHLVENWPLLGQETLGQVSAVALDMRGNVVVFHRGSRAWD 147 >SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36) Length = 821 Score = 81.8 bits (193), Expect = 8e-16 Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Query: 55 EVKD-WPQQ-SLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFD-KGPIVE 111 E++D WP +L++GQ++ V+I+ G I HRA R WD NTF E+ + + P+ Sbjct: 170 ELQDHWPSDPTLSIGQVSGVAIDLDGNVTILHRAGRPWDGNTFYENTDVLRKELREPLKT 229 Query: 112 DTILVLDPGSGSVLHSWGAYI-FYMPHGLTLDHHDNVWVTDVAKHQV 157 + +L L+P S V+ G+ F +PHGL+ D H N+W TDV HQV Sbjct: 230 NVLLWLNPQSELVMREEGSKAGFVLPHGLSFDQHGNMWATDVGLHQV 276 Score = 52.4 bits (120), Expect = 6e-07 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 168 PTLTIGEPFTAGLPF-RHRVLFCMPTSVAIASTGEIFVADGYCNNQIVKFNAAG 220 P++ +G + G ++ FC PT VA+ G IF+ADGYCN ++VK + G Sbjct: 529 PSMVLGTKYEPGSTLSEEKIQFCKPTDVAVDEEGNIFIADGYCNQRVVKLDKNG 582 >SB_24569| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1660 Score = 47.6 bits (108), Expect = 2e-05 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 21/173 (12%) Query: 94 TFNESNAYQNFDKGPIVEDTILVLDPGSGSVLHSWGAY-----IFYMPHGLTLDHHDNVW 148 T N+ + DK + D + DP + S+G F +PHG+ D DN++ Sbjct: 1448 TANDDGILERLDKSGDLVDNRIPTDPSLSRFVKSFGIAGGGDGCFNLPHGVATDPSDNIY 1507 Query: 149 VTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPTSVAIASTGEIFVADGY 208 V D ++ +TP + Y + + P VAI G+I D Y Sbjct: 1508 VADSGNSRLQIFTPEGY-YMRKVVSDQLN------------RPWGVAITPRGQIVTTD-Y 1553 Query: 209 CNNQIVKFNAAGTLLLTIPAYSD-TWSLNLPHSVTLLEHLDLVCVADRENMRI 260 N+++ F+ G L + D N P +T+ V VADR N R+ Sbjct: 1554 NNHKVFVFHRNGKLDFCFGSRGDGDGEFNNPAGITIDSDGQFV-VADRSNHRV 1605 Score = 34.3 bits (75), Expect = 0.16 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 9/87 (10%) Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPT 192 F P G+T+D V D + H+V + P + T G+ GL PT Sbjct: 1581 FNNPAGITIDSDGQFVVADRSNHRVQIFQPDG-TFVTKFGGKGTGDGL-------MRFPT 1632 Query: 193 SVAIASTGEIFVADGYCNNQIVKFNAA 219 VA+ G ++VAD + NN+I F+ A Sbjct: 1633 GVAVDKAGHLYVADTF-NNRIQVFSLA 1658 >SB_3355| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 752 Score = 41.1 bits (92), Expect = 0.001 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Query: 188 FCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAY-SDTWSLNLPHSVTLLEH 246 F P VA++ TGEI V+D N + F+A G ++ I Y +D LN P V + Sbjct: 474 FTHPHGVAVSETGEIAVSDTQ-KNCVHVFDAEGRKVMDIGGYGTDDGQLNYPAGVAFDKG 532 Query: 247 LDLVCVADRENMRI 260 + VADR+N R+ Sbjct: 533 NKNLIVADRDNHRV 546 >SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 965 Score = 40.7 bits (91), Expect = 0.002 Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 26/233 (11%) Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTL-TIGEPFTA-GLPFRHRVLFCM 190 F P G+ +D+ ++V D Y NHR L T GE T+ G R F Sbjct: 701 FKSPFGVAIDNEGRIYVAD-------SY---NHRVQVLGTRGEFITSFGSHGERRGEFNC 750 Query: 191 PTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAY-SDTWSLNLPHSVTLLEHLDL 249 PT V I + G + + D NN++ N G + + P + + + ++ Sbjct: 751 PTDVDIDNRGRVIICDN-GNNRVQVLNRNGGFIGKFGREGTGNGYFKSPWGLAVTANNEI 809 Query: 250 VCVADRENMRI--VCPKAG-LKSYADPLEPPTIIEDPTLGRVFAVTSHGDTIYAVNGPTS 306 V VAD EN R+ P+ + + P + P P V + D I+ + S Sbjct: 810 V-VADMENNRVQMFSPEGKFMMKFGSPGDRPGQFNAP---GYLLVNNEDDQIFVSD---S 862 Query: 307 QNIAVRGFTVNAVYGNILDTWEPTTG-FTNPHSLAVTRNGSHLYVSEIGPNKI 358 +N ++ F +N VY + G F +P LA+ G HL ++++G +++ Sbjct: 863 KNHRIQVFDMNGVYIRSFGSQGAGKGQFMHPRGLAMDIAG-HLIIADMGNHRL 914 Score = 32.7 bits (71), Expect = 0.49 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 4/108 (3%) Query: 156 QVYKYTPSNHRYPTLTIGEPF--TAGLPFRHRVLFCMPTSVAIASTGEIFVADGYCNNQI 213 Q++ NHR + + + G + F P +A+ G + +AD N+++ Sbjct: 856 QIFVSDSKNHRIQVFDMNGVYIRSFGSQGAGKGQFMHPRGLAMDIAGHLIIAD-MGNHRL 914 Query: 214 VKFNAAGTLLLTIPAY-SDTWSLNLPHSVTLLEHLDLVCVADRENMRI 260 N+AG + I + S L+ P SV ++ + + V+D N RI Sbjct: 915 QILNSAGEFVKEIGSEGSGDGQLSFPESVAIMPNSGYIVVSDLSNNRI 962 >SB_27124| Best HMM Match : NHL (HMM E-Value=6.4e-17) Length = 415 Score = 34.7 bits (76), Expect = 0.12 Identities = 11/27 (40%), Positives = 19/27 (70%) Query: 134 YMPHGLTLDHHDNVWVTDVAKHQVYKY 160 + PHG+T+D DN+ V D H+++K+ Sbjct: 348 WQPHGVTVDKDDNILVCDTGNHRLHKF 374 >SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) Length = 665 Score = 33.1 bits (72), Expect = 0.37 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Query: 113 TILVLDPGSGSVLHSWGAY---IFYMPHGLTLDHHDNVWVTDVA-KHQVYKYTPSNHRYP 168 T+++ P S S+ H Y I Y P + H +++ T + +H YP Sbjct: 256 TVIIYTPPSSSIPHRHHLYTTAIIYTPLSSPIPHRHHLYTTVIIYTPPSSSIHHCHHLYP 315 Query: 169 TLTIGEPFTAGLPFRH 184 T+ I P ++ +P RH Sbjct: 316 TVIIYTPPSSSIPHRH 331 Score = 31.9 bits (69), Expect = 0.86 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 113 TILVLDPGSGSVLHSWGAYI--FYMPHGLTLDHHDNVWVTDVA-KHQVYKYTPSNHRYPT 169 T+++ P S S+ H YI Y P ++ H +++ T + +H YPT Sbjct: 376 TVIIYTPPSSSIHHRH-LYITVIYTPPSSSIHHRHHLYTTAIIYTPPSSSIHHCHHLYPT 434 Query: 170 LTIGEPFTAGLPFRH 184 + I P ++ +P+ H Sbjct: 435 VIIYTPLSSSIPYCH 449 Score = 30.3 bits (65), Expect = 2.6 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%) Query: 113 TILVLDPGSGSVLHSWGAYIFYMPHGLTLDHHDNVWVTDVAKHQ-VYKYTPSN------- 164 T+++ P S S+ H Y P ++ H + + T + + V +TP + Sbjct: 532 TVIIYTPPSSSIPHRHHLY----PPSSSIPHRHHPYPTVIILYTTVIIHTPPSSSIPHRH 587 Query: 165 HRYPTLTIGEPFTAGLPFRHRVLFCMPTSVAIASTGEIFVADGY 208 H YPT+ I P ++ +P RH PT + I + I+ Y Sbjct: 588 HPYPTVIIHTPPSSSIPHRHHP---YPTVIYIPPSPSIYFRHPY 628 Score = 29.9 bits (64), Expect = 3.5 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 113 TILVLDPGSGSVLHSWGAY---IFYMPHGLTLDHHDNVWVTDVAKHQVYKYTPS-NHRYP 168 T+L+ P S S+ H Y I Y P ++ ++ + + T + P H YP Sbjct: 473 TVLIYTPPSSSIPHCHHLYPTVIIYTPPSSSI-YYRHPYPTVIIHTPPSSSIPHCYHLYP 531 Query: 169 TLTIGEPFTAGLPFRHRV 186 T+ I P ++ +P RH + Sbjct: 532 TVIIYTPPSSSIPHRHHL 549 Score = 28.7 bits (61), Expect = 8.0 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 113 TILVLDPGSGSVLHSWGAY---IFYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPT 169 T ++ P S S+ H Y I Y P ++ + + + T + P +H Y T Sbjct: 414 TAIIYTPPSSSIHHCHHLYPTVIIYTPLSSSIPYCHHPYPTVIIHTPPSSSIPHHHPYTT 473 Query: 170 LTIGEPFTAGLPFRHRV 186 + I P ++ +P H + Sbjct: 474 VLIYTPPSSSIPHCHHL 490 >SB_42304| Best HMM Match : NHL (HMM E-Value=0) Length = 1279 Score = 32.7 bits (71), Expect = 0.49 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 191 PTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSD-TWSLNLPHSVTLLEHLDL 249 PT VA+ G I VAD N++I F++ G + + LN PH + L + Sbjct: 295 PTGVAVMQNGHIIVAD-RDNHRIQVFSSDGRYFAKFGSKGEGDGQLNDPHGLALTPDGN- 352 Query: 250 VCVADRENMR 259 +C+AD N R Sbjct: 353 ICIADFRNNR 362 >SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 767 Score = 32.3 bits (70), Expect = 0.65 Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Query: 112 DTILVLDPGSGSVLHSWGAY-----IFYMPHGLTLDHHDNVWVTDVAKHQVYKYTP 162 DTI V DP SG L+S G F P GL +D D ++V D H+V P Sbjct: 662 DTIQVFDP-SGDYLYSVGGTGHGEGRFREPRGLHVDARDRLFVCDSGNHRVQVMAP 716 >SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) Length = 766 Score = 31.5 bits (68), Expect = 1.1 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 90 WDENTFNESNAYQNFDKGPIVEDTILVLDPGSGSVLHSWG---AYIFYMPHGLTLDHHDN 146 W E ES + G + D+++++D GS SV + A +FY+ L+H Sbjct: 460 WKEAIAEESASNAVDSPGSSLADSVIIIDLGSSSVKAGFAQEEAQVFYISLIGILEHAFL 519 Query: 147 VWVTDVAKHQVYKYTPSN 164 D KH+V P N Sbjct: 520 SLKVDPVKHKVIMTIPQN 537 >SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 887 Score = 31.1 bits (67), Expect = 1.5 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 191 PTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDTWSLNLPHSVTLLEHLDLV 250 P VA+ +G IFVAD + NN+I F G + ++ + V Sbjct: 672 PAGVAVDKSGNIFVAD-HGNNRIQAFTQEGEFIRKFGGKGTGLGQMKGPCGAAVDGENRV 730 Query: 251 CVADRENMRI 260 VADR+N RI Sbjct: 731 LVADRDNHRI 740 >SB_11461| Best HMM Match : NHL (HMM E-Value=0) Length = 819 Score = 30.7 bits (66), Expect = 2.0 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 10/126 (7%) Query: 136 PHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPTSVA 195 P G+ + H +V V+D KHQ+ + + LT P T G F P +A Sbjct: 500 PIGIAVTKHGDVIVSDNEKHQLKVFF-----HEDLT--RPKTIGANGIGICKFAFPRGIA 552 Query: 196 IASTGEIFVADGYCNNQIVKFNAAGTLLLTI-PAYSDTWSLNLPHSVTLLEHLDLVCVAD 254 + I VAD N++I G + + D N P+ V ++ V VAD Sbjct: 553 LDKEENILVADSQ-NHRIQVITIEGQYIGSFGNVGDDPGCFNTPYDVA-IDTSGNVLVAD 610 Query: 255 RENMRI 260 +N R+ Sbjct: 611 TKNHRV 616 >SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) Length = 868 Score = 30.3 bits (65), Expect = 2.6 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 149 VTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPT 192 VT+ Y++T S +RYPTLT+ P +RH L+ PT Sbjct: 777 VTNPPVSDTYRHT-SFYRYPTLTVTHP-PVSHTYRHTSLYRYPT 818 >SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0) Length = 839 Score = 29.1 bits (62), Expect = 6.1 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 169 TLTIGEPFTAGLPFRHRVLFCMPTSVAIASTGEIFVADGYC 209 TLT+ E TA + + H V +CM + + E+F+ G C Sbjct: 224 TLTL-ETLTAFVSYVHLVKYCMESGIPEKDASELFIFIGAC 263 Score = 29.1 bits (62), Expect = 6.1 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 169 TLTIGEPFTAGLPFRHRVLFCMPTSVAIASTGEIFVADGYC 209 TLT+ E TA + + H V +CM + + E+F+ G C Sbjct: 635 TLTL-ETLTAFVSYVHLVKYCMESGIPEKDASELFIFIGAC 674 >SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 632 Score = 29.1 bits (62), Expect = 6.1 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 6/93 (6%) Query: 188 FCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAY-SDTWSLNLPHSVTLLEH 246 F P VA+++ G+I V+D + + F G L+ SD P ++ + Sbjct: 414 FLQPHGVAVSTIGQIVVSDS-LKHHLQVFTPDGNLMFDFGGEGSDDGKFMHPMAIAFDKS 472 Query: 247 LDLVCVADRENMRI--VCPKAG--LKSYADPLE 275 + VAD +N RI V K G + ++DPL+ Sbjct: 473 EKCLYVADSDNNRIQVVDVKNGRYVPLFSDPLQ 505 >SB_29120| Best HMM Match : 7tm_1 (HMM E-Value=1e-07) Length = 298 Score = 29.1 bits (62), Expect = 6.1 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 5/61 (8%) Query: 152 VAKHQVYKYT--PSNHRYPTLTIGEPFTAGLPFRHRVLFCMPTSVAIASTGEIFVADGYC 209 +A H Y PSN + P L +G TAGL L P +A GE F C Sbjct: 31 LALHYTYNKIKKPSNKKIPHLLVGALSTAGLGI---ALCSYPPFIASRFVGEWFYGASVC 87 Query: 210 N 210 N Sbjct: 88 N 88 >SB_46018| Best HMM Match : I-set (HMM E-Value=0.025) Length = 1122 Score = 28.7 bits (61), Expect = 8.0 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 196 IASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDTWSLNLPHSVTLLEHLD--LVCVA 253 + +T + + G+C+ + L ++ Y+DTW L++ + + H + L CV Sbjct: 275 LRATSLVHIFYGFCSLLLFHMTVIFMLQSSMNEYNDTWKLSICKAQMIARHYEIRLTCVF 334 Query: 254 DRE 256 R+ Sbjct: 335 TRQ 337 >SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1712 Score = 28.7 bits (61), Expect = 8.0 Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%) Query: 134 YMPHGLTLDHHD-NVWVTDVAKHQV 157 + P+GLT+DH+D ++ TD +H + Sbjct: 324 FWPNGLTIDHNDKRIYWTDAKQHHI 348 >SB_24398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 500 Score = 28.7 bits (61), Expect = 8.0 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 136 PHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPTSVA 195 P G+ +D + ++D H+V ++P Y T G F P+ +A Sbjct: 431 PAGIAIDPEGFIIISDFQNHRVQVHSPEGEFYATF--------GSEGNIEGQFKFPSGIA 482 Query: 196 IASTGEIFVADGYCNNQI 213 + G + VAD + N++I Sbjct: 483 LTLDGHVIVADSH-NHRI 499 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.319 0.137 0.426 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,455,340 Number of Sequences: 59808 Number of extensions: 581035 Number of successful extensions: 1169 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 1128 Number of HSP's gapped (non-prelim): 50 length of query: 370 length of database: 16,821,457 effective HSP length: 83 effective length of query: 287 effective length of database: 11,857,393 effective search space: 3403071791 effective search space used: 3403071791 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 61 (28.7 bits)
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