Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001905-TA|BGIBMGA001905-PA|IPR013017|NHL,
IPR000720|Peptidyl-glycine alpha-amidating monooxygenase,
IPR011044|Quinoprotein amine dehydrogenase, beta chain-like,
IPR001258|NHL repeat
(370 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S75038-1|AAB32776.1| 905|Homo sapiens pancreatic peptidylglycin... 231 3e-60
S75037-1|AAB32775.1| 971|Homo sapiens pancreatic peptidylglycin... 231 3e-60
BT007419-1|AAP36087.1| 866|Homo sapiens peptidylglycine alpha-a... 231 3e-60
BC018127-1|AAH18127.1| 866|Homo sapiens peptidylglycine alpha-a... 231 3e-60
AF010472-1|AAD01439.1| 825|Homo sapiens alpha-amidating monooxy... 231 3e-60
AB095007-1|BAC22594.1| 973|Homo sapiens peptidylglycine alpha-a... 231 3e-60
M37721-1|AAA36414.1| 974|Homo sapiens peptidylglycine alpha-ami... 228 3e-59
U19965-1|AAB91431.1| 130|Homo sapiens peptidylglycine alpha-ami... 59 2e-08
AL445590-5|CAI40978.1| 347|Homo sapiens protein ( Human DNA seq... 57 1e-07
AF035320-1|AAB88190.1| 249|Homo sapiens peptidylglycine alpha-a... 51 8e-06
BC096827-1|AAH96827.1| 744|Homo sapiens tripartite motif-contai... 35 0.40
AF220022-1|AAG53476.1| 665|Homo sapiens tripartite motif protei... 33 2.1
AF220021-1|AAG53475.1| 733|Homo sapiens tripartite motif protei... 33 2.1
AF220020-1|AAG53474.1| 744|Homo sapiens tripartite motif protei... 33 2.1
AF045239-1|AAC24809.1| 744|Homo sapiens brain expressed ring fi... 33 2.1
BC011052-1|AAH11052.1| 744|Homo sapiens TRIM2 protein protein. 32 3.7
BC005016-1|AAH05016.1| 324|Homo sapiens Unknown (protein for IM... 32 3.7
AF220018-1|AAG53472.1| 744|Homo sapiens tripartite motif protei... 32 3.7
AB011089-1|BAA25443.1| 792|Homo sapiens KIAA0517 protein protein. 32 3.7
DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein. 31 4.9
>S75038-1|AAB32776.1| 905|Homo sapiens pancreatic peptidylglycine
alpha-amidating monooxygenase protein.
Length = 905
Score = 231 bits (565), Expect = 3e-60
Identities = 128/322 (39%), Positives = 180/322 (55%), Gaps = 20/322 (6%)
Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDKGPIVEDT 113
+E DWP L GQ++ V+++ VIFHR D VWD N+F+ YQ GPI EDT
Sbjct: 499 EEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDT 558
Query: 114 ILVLDPGSGSVLHSWGAYIFYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIG 173
ILV+DP + +VL S G +FY+PHGL++D N WVTDVA HQV+K P+N P L +G
Sbjct: 559 ILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILG 618
Query: 174 EPFTAGLPFRHRVLFCMPTSVAI-ASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDT 232
G H FC PT VA+ TG I+V+DGYCN++IV+F+ +G + S
Sbjct: 619 RSMQPGSDQNH---FCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSG 675
Query: 233 WS-----LNLPHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEPPTIIEDPTLGR 287
S +PHS+ L+ L +CVADREN RI C K K + I+ + GR
Sbjct: 676 SSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVRE------IKHSSFGR 729
Query: 288 -VFAVTSHGDTIYAVNGPT--SQNIAVRGFTVNAVYGNILDTWEPT-TGFTNPHSLAVTR 343
VFA++ ++AVNG V+GF +N G I+D ++P F PH + +
Sbjct: 730 NVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFDMPHDIVASE 789
Query: 344 NGSHLYVSEIGPNKIWKFELTD 365
+G+ +Y+ + N +WKF LT+
Sbjct: 790 DGT-VYIGDAHTNTVWKFTLTE 810
>S75037-1|AAB32775.1| 971|Homo sapiens pancreatic peptidylglycine
alpha-amidating monooxygenase protein.
Length = 971
Score = 231 bits (565), Expect = 3e-60
Identities = 128/322 (39%), Positives = 180/322 (55%), Gaps = 20/322 (6%)
Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDKGPIVEDT 113
+E DWP L GQ++ V+++ VIFHR D VWD N+F+ YQ GPI EDT
Sbjct: 499 EEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDT 558
Query: 114 ILVLDPGSGSVLHSWGAYIFYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIG 173
ILV+DP + +VL S G +FY+PHGL++D N WVTDVA HQV+K P+N P L +G
Sbjct: 559 ILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILG 618
Query: 174 EPFTAGLPFRHRVLFCMPTSVAI-ASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDT 232
G H FC PT VA+ TG I+V+DGYCN++IV+F+ +G + S
Sbjct: 619 RSMQPGSDQNH---FCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSG 675
Query: 233 WS-----LNLPHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEPPTIIEDPTLGR 287
S +PHS+ L+ L +CVADREN RI C K K + I+ + GR
Sbjct: 676 SSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVRE------IKHSSFGR 729
Query: 288 -VFAVTSHGDTIYAVNGPT--SQNIAVRGFTVNAVYGNILDTWEPT-TGFTNPHSLAVTR 343
VFA++ ++AVNG V+GF +N G I+D ++P F PH + +
Sbjct: 730 NVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFDMPHDIVASE 789
Query: 344 NGSHLYVSEIGPNKIWKFELTD 365
+G+ +Y+ + N +WKF LT+
Sbjct: 790 DGT-VYIGDAHTNTVWKFTLTE 810
>BT007419-1|AAP36087.1| 866|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 866
Score = 231 bits (565), Expect = 3e-60
Identities = 128/322 (39%), Positives = 180/322 (55%), Gaps = 20/322 (6%)
Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDKGPIVEDT 113
+E DWP L GQ++ V+++ VIFHR D VWD N+F+ YQ GPI EDT
Sbjct: 392 EEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDT 451
Query: 114 ILVLDPGSGSVLHSWGAYIFYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIG 173
ILV+DP + +VL S G +FY+PHGL++D N WVTDVA HQV+K P+N P L +G
Sbjct: 452 ILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILG 511
Query: 174 EPFTAGLPFRHRVLFCMPTSVAI-ASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDT 232
G H FC PT VA+ TG I+V+DGYCN++IV+F+ +G + S
Sbjct: 512 RSMQPGSDQNH---FCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSG 568
Query: 233 WS-----LNLPHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEPPTIIEDPTLGR 287
S +PHS+ L+ L +CVADREN RI C K K + I+ + GR
Sbjct: 569 SSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVRE------IKHSSFGR 622
Query: 288 -VFAVTSHGDTIYAVNGPT--SQNIAVRGFTVNAVYGNILDTWEPT-TGFTNPHSLAVTR 343
VFA++ ++AVNG V+GF +N G I+D ++P F PH + +
Sbjct: 623 NVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFDMPHDIVASE 682
Query: 344 NGSHLYVSEIGPNKIWKFELTD 365
+G+ +Y+ + N +WKF LT+
Sbjct: 683 DGT-VYIGDAHTNTVWKFTLTE 703
>BC018127-1|AAH18127.1| 866|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 866
Score = 231 bits (565), Expect = 3e-60
Identities = 128/322 (39%), Positives = 180/322 (55%), Gaps = 20/322 (6%)
Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDKGPIVEDT 113
+E DWP L GQ++ V+++ VIFHR D VWD N+F+ YQ GPI EDT
Sbjct: 392 EEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDT 451
Query: 114 ILVLDPGSGSVLHSWGAYIFYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIG 173
ILV+DP + +VL S G +FY+PHGL++D N WVTDVA HQV+K P+N P L +G
Sbjct: 452 ILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILG 511
Query: 174 EPFTAGLPFRHRVLFCMPTSVAI-ASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDT 232
G H FC PT VA+ TG I+V+DGYCN++IV+F+ +G + S
Sbjct: 512 RSMQPGSDQNH---FCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSG 568
Query: 233 WS-----LNLPHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEPPTIIEDPTLGR 287
S +PHS+ L+ L +CVADREN RI C K K + I+ + GR
Sbjct: 569 SSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVRE------IKHSSFGR 622
Query: 288 -VFAVTSHGDTIYAVNGPT--SQNIAVRGFTVNAVYGNILDTWEPT-TGFTNPHSLAVTR 343
VFA++ ++AVNG V+GF +N G I+D ++P F PH + +
Sbjct: 623 NVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFDMPHDIVASE 682
Query: 344 NGSHLYVSEIGPNKIWKFELTD 365
+G+ +Y+ + N +WKF LT+
Sbjct: 683 DGT-VYIGDAHTNTVWKFTLTE 703
>AF010472-1|AAD01439.1| 825|Homo sapiens alpha-amidating
monooxygenase protein.
Length = 825
Score = 231 bits (565), Expect = 3e-60
Identities = 128/322 (39%), Positives = 180/322 (55%), Gaps = 20/322 (6%)
Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDKGPIVEDT 113
+E DWP L GQ++ V+++ VIFHR D VWD N+F+ YQ GPI EDT
Sbjct: 437 EEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDT 496
Query: 114 ILVLDPGSGSVLHSWGAYIFYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIG 173
ILV+DP + +VL S G +FY+PHGL++D N WVTDVA HQV+K P+N P L +G
Sbjct: 497 ILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILG 556
Query: 174 EPFTAGLPFRHRVLFCMPTSVAI-ASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDT 232
G H FC PT VA+ TG I+V+DGYCN++IV+F+ +G + S
Sbjct: 557 RSMQPGSDQNH---FCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSG 613
Query: 233 WS-----LNLPHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEPPTIIEDPTLGR 287
S +PHS+ L+ L +CVADREN RI C K K + I+ + GR
Sbjct: 614 SSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVRE------IKHSSFGR 667
Query: 288 -VFAVTSHGDTIYAVNGPT--SQNIAVRGFTVNAVYGNILDTWEPT-TGFTNPHSLAVTR 343
VFA++ ++AVNG V+GF +N G I+D ++P F PH + +
Sbjct: 668 NVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFDMPHDIVASE 727
Query: 344 NGSHLYVSEIGPNKIWKFELTD 365
+G+ +Y+ + N +WKF LT+
Sbjct: 728 DGT-VYIGDAHTNTVWKFTLTE 748
>AB095007-1|BAC22594.1| 973|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 973
Score = 231 bits (565), Expect = 3e-60
Identities = 128/322 (39%), Positives = 180/322 (55%), Gaps = 20/322 (6%)
Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDKGPIVEDT 113
+E DWP L GQ++ V+++ VIFHR D VWD N+F+ YQ GPI EDT
Sbjct: 499 EEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDT 558
Query: 114 ILVLDPGSGSVLHSWGAYIFYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIG 173
ILV+DP + +VL S G +FY+PHGL++D N WVTDVA HQV+K P+N P L +G
Sbjct: 559 ILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILG 618
Query: 174 EPFTAGLPFRHRVLFCMPTSVAI-ASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDT 232
G H FC PT VA+ TG I+V+DGYCN++IV+F+ +G + S
Sbjct: 619 RSMQPGSDQNH---FCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSG 675
Query: 233 WS-----LNLPHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEPPTIIEDPTLGR 287
S +PHS+ L+ L +CVADREN RI C K K + I+ + GR
Sbjct: 676 SSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVRE------IKHSSFGR 729
Query: 288 -VFAVTSHGDTIYAVNGPT--SQNIAVRGFTVNAVYGNILDTWEPT-TGFTNPHSLAVTR 343
VFA++ ++AVNG V+GF +N G I+D ++P F PH + +
Sbjct: 730 NVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFDMPHDIVASE 789
Query: 344 NGSHLYVSEIGPNKIWKFELTD 365
+G+ +Y+ + N +WKF LT+
Sbjct: 790 DGT-VYIGDAHTNTVWKFTLTE 810
>M37721-1|AAA36414.1| 974|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 974
Score = 228 bits (557), Expect = 3e-59
Identities = 127/322 (39%), Positives = 179/322 (55%), Gaps = 20/322 (6%)
Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDKGPIVEDT 113
+E DWP L GQ++ V+++ VIFHR D VWD N+F+ YQ GPI EDT
Sbjct: 499 EEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDT 558
Query: 114 ILVLDPGSGSVLHSWGAYIFYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIG 173
ILV+DP + +VL S +FY+PHGL++D N WVTDVA HQV+K P+N P L +G
Sbjct: 559 ILVIDPNNAAVLQSSEKNLFYLPHGLSIDKDGNYWVTDVALHQVFKLDPNNKEGPVLILG 618
Query: 174 EPFTAGLPFRHRVLFCMPTSVAI-ASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSDT 232
G H FC PT VA+ TG I+V+DGYCN++IV+F+ +G + S
Sbjct: 619 RSMQPGSDQNH---FCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSG 675
Query: 233 WS-----LNLPHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEPPTIIEDPTLGR 287
S +PHS+ L+ L +CVADREN RI C K K + I+ + GR
Sbjct: 676 SSPLPGQFTVPHSLALVPLLGQLCVADRENGRIQCFKTDTKEFVRE------IKHSSFGR 729
Query: 288 -VFAVTSHGDTIYAVNGPT--SQNIAVRGFTVNAVYGNILDTWEPT-TGFTNPHSLAVTR 343
VFA++ ++AVNG V+GF +N G I+D ++P F PH + +
Sbjct: 730 NVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFDMPHDIVASE 789
Query: 344 NGSHLYVSEIGPNKIWKFELTD 365
+G+ +Y+ + N +WKF LT+
Sbjct: 790 DGT-VYIGDAHTNTVWKFTLTE 810
>U19965-1|AAB91431.1| 130|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 130
Score = 59.3 bits (137), Expect = 2e-08
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 54 QEVKDWPQQSLNVGQITAVSINSLGQPVIFHRADRVWDENTFNESNAYQNFDKGPIVED 112
+E DWP L GQ++ V+++ VIFHR D VWD N+F+ YQ GPI ED
Sbjct: 72 EEALDWPGVYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEED 130
>AL445590-5|CAI40978.1| 347|Homo sapiens protein ( Human DNA
sequence from clone RP11-50D16 on chromosome 13. ).
Length = 347
Score = 56.8 bits (131), Expect = 1e-07
Identities = 68/252 (26%), Positives = 104/252 (41%), Gaps = 22/252 (8%)
Query: 122 GSVLHSWGAYIFYMPHGL----TLDHHDNVWVTDVAK----HQVYKYTPSNHRYPTLTIG 173
G L +W Y PHG+ TL + +VW+TDV H V KY+ L G
Sbjct: 94 GYFLRAWN-YTVDTPHGIFAASTL-YEQSVWITDVGSGFFGHTVKKYSSFGDLVQVL--G 149
Query: 174 EPFTAGLPFRHRVLFCMPTSVAIASTGEIFV--ADGYCNNQIVKFNAAGTLLLTIPAYSD 231
P G + + F P + + TG+I++ DG NN+++K + ++L + +
Sbjct: 150 TPGKKGTSL-NPLQFDNPAELYVEDTGDIYIVDGDGGLNNRLIKL-SQDFMILWLHGENG 207
Query: 232 TW--SLNLPHSVTLLEHLDLVCVADRENMRIVCPKAGLKSYADPLEPPTIIEDPTLGRVF 289
T N+PHSVT L+ V VADR N RI + E P+ R
Sbjct: 208 TGPAKFNIPHSVT-LDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVR-- 264
Query: 290 AVTSHGDTIYAVNGPTSQNIAVRGFTVNAVYGNILDTWEPTTGFTNPHSLAVTRNGSHLY 349
T G + S+ V V ++ + + PH L V R +Y
Sbjct: 265 -FTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVY 323
Query: 350 VSEIGPNKIWKF 361
V+EIG ++ K+
Sbjct: 324 VAEIGAKQVQKY 335
>AF035320-1|AAB88190.1| 249|Homo sapiens peptidylglycine
alpha-amidating monooxygenase protein.
Length = 249
Score = 50.8 bits (116), Expect = 8e-06
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 280 IEDPTLGR-VFAVTSHGDTIYAVNGPT--SQNIAVRGFTVNAVYGNILDTWEPTTG-FTN 335
I+ + GR VFA++ ++AVNG V+GF +N G I+D ++P F
Sbjct: 16 IKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVRKHFDM 75
Query: 336 PHSLAVTRNGSHLYVSEIGPNKIWKFELTD 365
PH + + +G+ +Y+ + N +WKF LT+
Sbjct: 76 PHDIVASEDGT-VYIGDAHTNTVWKFTLTE 104
>BC096827-1|AAH96827.1| 744|Homo sapiens tripartite
motif-containing 3 protein.
Length = 744
Score = 35.1 bits (77), Expect = 0.40
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPT 192
F PH + +++ + + VTD H V Y+ F G F PT
Sbjct: 622 FAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFL--------FKFGSHGEGNGQFNAPT 673
Query: 193 SVAIASTGEIFVADGYCNNQIVKFNAAGTLL 223
VA+ S G I VAD + N++I F+++G+ L
Sbjct: 674 GVAVDSNGNIIVAD-WGNSRIQVFDSSGSFL 703
>AF220022-1|AAG53476.1| 665|Homo sapiens tripartite motif protein
TRIM3 isoform gamma protein.
Length = 665
Score = 32.7 bits (71), Expect = 2.1
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPT 192
F PH + + + + V VTD H Y+ F G F PT
Sbjct: 543 FAGPHFVAVSNKNEVVVTDFHNHSEKVYSADGEFL--------FKFGSHGEGNGQFNAPT 594
Query: 193 SVAIASTGEIFVADGYCNNQIVKFNAAGTLL 223
VA+ S G I VAD + N++I F+++G+ L
Sbjct: 595 GVAVDSNGNIIVAD-WGNSRIQVFDSSGSFL 624
>AF220021-1|AAG53475.1| 733|Homo sapiens tripartite motif protein
TRIM3 isoform beta protein.
Length = 733
Score = 32.7 bits (71), Expect = 2.1
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPT 192
F PH + + + + V VTD H Y+ F G F PT
Sbjct: 611 FAGPHFVAVSNKNEVVVTDFHNHSEKVYSADGEFL--------FKFGSHGEGNGQFNAPT 662
Query: 193 SVAIASTGEIFVADGYCNNQIVKFNAAGTLL 223
VA+ S G I VAD + N++I F+++G+ L
Sbjct: 663 GVAVDSNGNIIVAD-WGNSRIQVFDSSGSFL 692
>AF220020-1|AAG53474.1| 744|Homo sapiens tripartite motif protein
TRIM3 isoform alpha protein.
Length = 744
Score = 32.7 bits (71), Expect = 2.1
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPT 192
F PH + + + + V VTD H Y+ F G F PT
Sbjct: 622 FAGPHFVAVSNKNEVVVTDFHNHSEKVYSADGEFL--------FKFGSHGEGNGQFNAPT 673
Query: 193 SVAIASTGEIFVADGYCNNQIVKFNAAGTLL 223
VA+ S G I VAD + N++I F+++G+ L
Sbjct: 674 GVAVDSNGNIIVAD-WGNSRIQVFDSSGSFL 703
>AF045239-1|AAC24809.1| 744|Homo sapiens brain expressed ring
finger protein protein.
Length = 744
Score = 32.7 bits (71), Expect = 2.1
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPT 192
F PH + + + + V VTD H Y+ F G F PT
Sbjct: 622 FAGPHFVAVSNKNEVVVTDFHNHSEKVYSADGEFL--------FKFGSHGEGNGQFNAPT 673
Query: 193 SVAIASTGEIFVADGYCNNQIVKFNAAGTLL 223
VA+ S G I VAD + N++I F+++G+ L
Sbjct: 674 GVAVDSNGNIIVAD-WGNSRIQVFDSSGSFL 703
>BC011052-1|AAH11052.1| 744|Homo sapiens TRIM2 protein protein.
Length = 744
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 188 FCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSD 231
F PT VA+ S G I VAD + N++I F+ +G+ L I +D
Sbjct: 669 FNAPTGVAVDSNGNIIVAD-WGNSRIQVFDGSGSFLSYINTSAD 711
>BC005016-1|AAH05016.1| 324|Homo sapiens Unknown (protein for
IMAGE:3636175) protein.
Length = 324
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 188 FCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSD 231
F PT VA+ S G I VAD + N++I F+ +G+ L I +D
Sbjct: 241 FNAPTGVAVDSNGNIIVAD-WGNSRIQVFDGSGSFLSYINTSAD 283
>AF220018-1|AAG53472.1| 744|Homo sapiens tripartite motif protein
TRIM2 protein.
Length = 744
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 188 FCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSD 231
F PT VA+ S G I VAD + N++I F+ +G+ L I +D
Sbjct: 669 FNAPTGVAVDSNGNIIVAD-WGNSRIQVFDGSGSFLSYINTSAD 711
>AB011089-1|BAA25443.1| 792|Homo sapiens KIAA0517 protein protein.
Length = 792
Score = 31.9 bits (69), Expect = 3.7
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 188 FCMPTSVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAYSD 231
F PT VA+ S G I VAD + N++I F+ +G+ L I +D
Sbjct: 717 FNAPTGVAVDSNGNIIVAD-WGNSRIQVFDGSGSFLSYINTSAD 759
>DQ232881-1|ABB18374.1| 868|Homo sapiens LIN41 protein.
Length = 868
Score = 31.5 bits (68), Expect = 4.9
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Query: 133 FYMPHGLTLDHHDNVWVTDVAKHQVYKYTPSNHRYPTLTIGEPFTAGLPFRHRVLFCMPT 192
F P G+ +H ++ VTD H++ P +G T F P
Sbjct: 747 FDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQ--SARFLGSEGTG------NGQFLRPQ 798
Query: 193 SVAIASTGEIFVADGYCNNQIVKFNAAGTLLLTIPAY-SDTWSLNLPHSVTLLEHLDLVC 251
VA+ G I VAD N+++ F + G+ L A S ++ P + + ++
Sbjct: 799 GVAVDQEGRIIVADSR-NHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAITPD-GMIV 856
Query: 252 VADRENMRIV 261
V D N RI+
Sbjct: 857 VVDFGNNRIL 866
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.137 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,369,417
Number of Sequences: 224733
Number of extensions: 2667645
Number of successful extensions: 4084
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4021
Number of HSP's gapped (non-prelim): 39
length of query: 370
length of database: 73,234,838
effective HSP length: 91
effective length of query: 279
effective length of database: 52,784,135
effective search space: 14726773665
effective search space used: 14726773665
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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