BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001904-TA|BGIBMGA001904-PA|IPR006631|Protein of unknown function DM4/12 (279 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 27 3.9 SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 6.9 SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 26 6.9 SPAC26H5.13c |||DUF1753 family protein|Schizosaccharomyces pombe... 26 6.9 SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 26 6.9 SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 25 9.1 SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyce... 25 9.1 SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 25 9.1 SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 25 9.1 >SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces pombe|chr 2|||Manual Length = 448 Score = 26.6 bits (56), Expect = 3.9 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Query: 197 FLGEIM-KLFFTPSKSPYSDLLPEYLEAQKAGESGGE 232 + GE M ++ FT ++S +DL+ EY + Q+AG G+ Sbjct: 398 YTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGIDEGD 434 >SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 838 Score = 25.8 bits (54), Expect = 6.9 Identities = 14/48 (29%), Positives = 19/48 (39%) Query: 25 DELAKENIPHSRQKRILWITNDGRLALPPGTTMAITPSLSMPFVRHPP 72 D + PHS I ++ L + +TP L MP HPP Sbjct: 263 DYMTDSKAPHSATSLINGVSIVIELIRKNNSDYDVTPVLQMPLDTHPP 310 >SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 749 Score = 25.8 bits (54), Expect = 6.9 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 58 AITPSLSMPF----VRHPPKGFLSNMTISFPFSIDFDKLGLTD--NENP 100 ++ PS PF V HPP LS T + P S D D NENP Sbjct: 271 SLNPSTPSPFGGSPVMHPPVSNLSPRTPAVPMSSDGHLAPAFDFLNENP 319 >SPAC26H5.13c |||DUF1753 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 236 Score = 25.8 bits (54), Expect = 6.9 Identities = 12/41 (29%), Positives = 21/41 (51%) Query: 51 LPPGTTMAITPSLSMPFVRHPPKGFLSNMTISFPFSIDFDK 91 LPP + +T L P++ + +L N T F SI+ ++ Sbjct: 189 LPPNFSGRVTRLLMKPYIMAANRSYLRNHTKRFTDSIELEQ 229 >SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 432 Score = 25.8 bits (54), Expect = 6.9 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Query: 243 SIFQSSTNKYTQEAENIHKRQEHDNIEENKIEE 275 S+F+S+ K TQE E++ R DN+ N IE+ Sbjct: 75 SMFRSAFPKATQEEEDLEMRWIRDNL--NPIED 105 >SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces pombe|chr 1|||Manual Length = 427 Score = 25.4 bits (53), Expect = 9.1 Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 78 NMTISFPFSIDFDKLGLTDNENPYGDFPPILARSMSGAA 116 N+ I + KLG N+ P FP ++A +GA+ Sbjct: 5 NVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGAS 43 >SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyces pombe|chr 2|||Manual Length = 610 Score = 25.4 bits (53), Expect = 9.1 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 156 GERAIMYGIAED-MLSNFG--LSGKECLLRAICEIQSHPLTNFGFLGEIMKL 204 G YG+ D L F L E ++ CE S+PL N L I KL Sbjct: 341 GSGCYFYGLGNDEQLDEFEKRLESGEKVMALFCEFPSNPLLNSPDLVRIRKL 392 >SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces pombe|chr 2|||Manual Length = 476 Score = 25.4 bits (53), Expect = 9.1 Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 204 LFFTPSKSPYSDLLPEYLEAQK 225 + FT S PY+D + +YLE K Sbjct: 364 ILFTASVQPYADPIIDYLERDK 385 >SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity |Schizosaccharomyces pombe|chr 1|||Manual Length = 408 Score = 25.4 bits (53), Expect = 9.1 Identities = 11/28 (39%), Positives = 14/28 (50%) Query: 207 TPSKSPYSDLLPEYLEAQKAGESGGECW 234 +P Y+ LLPEY+ GE G W Sbjct: 232 SPQGLKYAALLPEYVAKFSIGEKGLTVW 259 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.136 0.406 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,327,179 Number of Sequences: 5004 Number of extensions: 56943 Number of successful extensions: 137 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 132 Number of HSP's gapped (non-prelim): 9 length of query: 279 length of database: 2,362,478 effective HSP length: 72 effective length of query: 207 effective length of database: 2,002,190 effective search space: 414453330 effective search space used: 414453330 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 53 (25.4 bits)
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