Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001903-TA|BGIBMGA001903-PA|IPR005225|Small GTP-binding
protein domain, IPR013753|Ras, IPR001806|Ras GTPase,
IPR006688|ADP-ribosylation factor, IPR003577|Ras small GTPase, Ras
type, IPR003579|Ras small GTPase, Rab type, IPR003578|Ras small
GTPase, Rho type, IPR002041|GTP-binding nuclear protein Ran
         (208 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           141   1e-35
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    71   3e-14
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    25   1.2  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    25   1.2  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    25   1.6  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   6.7  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  141 bits (342), Expect = 1e-35
 Identities = 67/163 (41%), Positives = 97/163 (59%), Gaps = 2/163 (1%)

Query: 21  FKIVLIGDCGTGKTCIVQRLKSGNFIERHGNTIGVDFSMKTLLVDGKKVKLQIWDTAGQE 80
           FK+VL+G+   GK+ +V R   G F E   +TIG  F  +TL +D   VK +IWDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84

Query: 81  RFRTITQSYYRSANGVIIVYDITKRSTFLSLQKWIEEVRRYTSSNVIVSLIGNKCDLTEQ 140
           R+ ++   YYR A   I+VYDI    +F   + W++E++R  S N++++L GNK DL   
Sbjct: 85  RYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANS 144

Query: 141 REVESDEPKSFCRYVPEIMFVMETSAKDNTNVEDTFRSLATEL 183
           R V+ +E K +       +  METSAK   NV D F ++A +L
Sbjct: 145 RVVDYEEAKQYAD--DNRLLFMETSAKTAVNVNDIFLAIAKKL 185


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 70.5 bits (165), Expect = 3e-14
 Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 22  KIVLIGDCGTGKTCIVQRLKSGNFIERHGNTIGVDFSMKTLLVDGKKVKLQIWDTAGQER 81
           K V++GD   GKTC++    + +F   +  T   ++S   ++VDG +V L +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAP-MVVDGVQVSLGLWDTAGQED 66

Query: 82  FRTITQSYYRSANGVIIVYDITKRSTFLSL-QKWIEEVRRYTSSNVIVSLIGNKCDLTEQ 140
           +  +    Y   +  +I Y +   S+F ++  KW  E++ +     I+ L+G K DL E 
Sbjct: 67  YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPII-LVGTKIDLRED 125

Query: 141 REVES 145
           RE  S
Sbjct: 126 RETIS 130


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 111 LQKWIEEVRRYTSSNVIVSLIGNKCDLTEQREVE 144
           L++WI+ +        +V   GN+  L EQ+ ++
Sbjct: 309 LERWIDRIYEAIHQGFVVDESGNRIPLDEQKGID 342


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 111 LQKWIEEVRRYTSSNVIVSLIGNKCDLTEQREVE 144
           L++WI+ +        +V   GN+  L EQ+ ++
Sbjct: 309 LERWIDRIYEAIHQGFVVDESGNRIPLDEQKGID 342


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 91  RSANGVIIVYDITKRSTFLS---LQKWIEEVRRYTSSNVIVSLIGNKCDLTEQREVE 144
           R+AN  +   D     T +S   L++W + +        ++   GN+  L EQR ++
Sbjct: 286 RAANTTLQDVDRVDNGTTVSVNDLERWRDRIHEAIDQGFVLDKSGNRIMLDEQRGID 342


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 141 REVESDEPKSFCRYVPEIMFVMETSAKDNTNVEDTFRSLATELKVE 186
           +E+  D+P  F    P   FV     ++N  +ED    + T  ++E
Sbjct: 149 KEIGLDKPLIFSSETPLRKFVAYIDPENNFAIEDKLSQVNTLQQIE 194


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,688
Number of Sequences: 2123
Number of extensions: 7626
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 6
length of query: 208
length of database: 516,269
effective HSP length: 61
effective length of query: 147
effective length of database: 386,766
effective search space: 56854602
effective search space used: 56854602
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)