BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001902-TA|BGIBMGA001902-PA|IPR005331|Chondroitin 4-O-sulfotransferase (256 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 30 0.38 SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe... 30 0.38 SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 27 2.7 SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 26 4.7 SPBC12D12.06 |srb11||cyclin CycC|Schizosaccharomyces pombe|chr 2... 25 8.2 SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 25 8.2 >SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizosaccharomyces pombe|chr 3|||Manual Length = 920 Score = 29.9 bits (64), Expect = 0.38 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 198 KFETLDEDQRYLIQLARLQDVVKPEWRNSGKGTNTLHNINHLYSRLK 244 +FE DE R + A +D+ P WR K + TL N + +S+++ Sbjct: 207 RFEREDESSRQKLSAAMNEDI--PPWRQPSKNSQTLSNGDLQHSKVQ 251 >SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe|chr 2|||Manual Length = 350 Score = 29.9 bits (64), Expect = 0.38 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 130 FHDKMGRMIIKKYRKSQNKPVPTERYPVFEEFVSYVLDE-TRARRSLDMHWTP 181 FH + K + N VP + Y FEE++ +L++ + +L HWTP Sbjct: 142 FHLDGKNLRAKGLNRIGNLIVPNDNYCRFEEWIFPILNKMVEEQETLGTHWTP 194 >SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 651 Score = 27.1 bits (57), Expect = 2.7 Identities = 13/31 (41%), Positives = 16/31 (51%) Query: 96 KAQPDSITFLIVRHPLERLASAYNDKIVHAW 126 +A + IT L HP LA+A DK V W Sbjct: 329 QAHSEYITSLDFSHPFGTLATASTDKTVKVW 359 >SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 729 Score = 26.2 bits (55), Expect = 4.7 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 6/98 (6%) Query: 69 AFLDKTKEVPLVLARRKYARPTIEMIKKAQPDSITFLIVRHPLERLASAYNDKIVHAWPK 128 AFL+ E L L++ + A+ TI ++ PD+ + + L+R A Y D Sbjct: 223 AFLETRAEYELYLSKMEEAKSTIYLLLDRNPDNHQYY---YNLQR-AYGYEDASGKVLDS 278 Query: 129 SFHDKMGRMIIKKYRKSQ-NKPVPTERYPVFEEFVSYV 165 + + + K+Y KS+ +P E+ +EF+++V Sbjct: 279 AEWLNLYSQLAKRYPKSECPTRLPLEKLE-GDEFLTHV 315 >SPBC12D12.06 |srb11||cyclin CycC|Schizosaccharomyces pombe|chr 2|||Manual Length = 228 Score = 25.4 bits (53), Expect = 8.2 Identities = 10/21 (47%), Positives = 14/21 (66%) Query: 104 FLIVRHPLERLASAYNDKIVH 124 FLIV HP L A++D I++ Sbjct: 132 FLIVHHPYTSLEQAFHDGIIN 152 >SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 728 Score = 25.4 bits (53), Expect = 8.2 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 17/105 (16%) Query: 47 NIFKAASTSWMYNFN---LMANYSAAFLDKTKEVPLVLARRKYARPTIEMIKKAQPDSIT 103 +IF S +W+ ++ ++ S+AFL+ L YA + + Sbjct: 168 SIFHRLSVAWVGEYSSVTMLVPDSSAFLNVYTNTELAYLYSMYAA-----------EDVK 216 Query: 104 FLIVRHPLERLASAYNDKIVHAWPKSFHDKMGRMIIKKYRKSQNK 148 LI +H L Y + ++ PK+FH K G I K+ K Q K Sbjct: 217 TLIHQHILVN-QRVYAEDVIE--PKTFHYKNGISISMKFDKDQKK 258 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.324 0.136 0.425 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,214,071 Number of Sequences: 5004 Number of extensions: 51177 Number of successful extensions: 162 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 160 Number of HSP's gapped (non-prelim): 6 length of query: 256 length of database: 2,362,478 effective HSP length: 71 effective length of query: 185 effective length of database: 2,007,194 effective search space: 371330890 effective search space used: 371330890 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 53 (25.4 bits)
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